RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 WASHC2AQ641Q2 1341 aa11.22□□□□□ -0.61
SFXN1-211ENST00000515736 LMTK2Q8IWU2 1503 aa11.22□□□□□ -0.61
SFXN1-211ENST00000515736 USP47Q96K76 1375 aa11.22□□□□□ -0.61
SFXN1-211ENST00000515736 MYO5BQ9ULV0 1848 aa11.22□□□□□ -0.61
SFXN1-211ENST00000515736 KIF1BO60333 1816 aa11.21□□□□□ -0.61
SFXN1-211ENST00000515736 ADGRB3O60242 1522 aa11.21□□□□□ -0.61
SFXN1-211ENST00000515736 PRAG1Q86YV5 1406 aa11.21□□□□□ -0.61
SFXN1-211ENST00000515736 GPRASP1Q5JY77 1395 aa11.21□□□□□ -0.61
SFXN1-211ENST00000515736 BRICD5Q6PL45 260 aa11.21□□□□□ -0.61
SFXN1-211ENST00000515736 FAM174AQ8TBP5 190 aa11.21□□□□□ -0.61
SFXN1-211ENST00000515736 PRR14Q9BWN1 585 aa11.21□□□□□ -0.61
SFXN1-211ENST00000515736 IDI1Q13907 227 aa11.2□□□□□ -0.62
SFXN1-211ENST00000515736 LRCH3Q96II8 777 aa11.2□□□□□ -0.62
SFXN1-211ENST00000515736 SLC26A8Q96RN1 970 aa11.2□□□□□ -0.62
SFXN1-211ENST00000515736 ROBO1Q9Y6N7 1651 aa11.2□□□□□ -0.62
SFXN1-211ENST00000515736 TMEM94Q12767 1356 aa11.19□□□□□ -0.62
SFXN1-211ENST00000515736 FAM196BA6NMK8 535 aa11.19□□□□□ -0.62
SFXN1-211ENST00000515736 PHLDB3Q6NSJ2 640 aa11.19□□□□□ -0.62
SFXN1-211ENST00000515736 MAP10Q9P2G4 905 aa11.19□□□□□ -0.62
SFXN1-211ENST00000515736 KTN1Q86UP2 1357 aaKnown RBP11.18□□□□□ -0.62
SFXN1-211ENST00000515736 PTPRNQ16849 979 aa11.18□□□□□ -0.62
SFXN1-211ENST00000515736 THAP11Q96EK4 314 aa11.18□□□□□ -0.62
SFXN1-211ENST00000515736 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.18□□□□□ -0.62
SFXN1-211ENST00000515736 NOS1P29475 1434 aa11.18□□□□□ -0.62
SFXN1-211ENST00000515736 USP17L15C9J2P7 530 aa11.17□□□□□ -0.62
SFXN1-211ENST00000515736 USP17L10C9JJH3 530 aa11.17□□□□□ -0.62
SFXN1-211ENST00000515736 USP17L13C9JLJ4 530 aa11.17□□□□□ -0.62
SFXN1-211ENST00000515736 USP17L12C9JPN9 530 aa11.17□□□□□ -0.62
SFXN1-211ENST00000515736 USP17L11C9JVI0 530 aa11.17□□□□□ -0.62
SFXN1-211ENST00000515736 USP17L21D6R901 530 aa11.17□□□□□ -0.62
SFXN1-211ENST00000515736 USP17L18D6R9N7 530 aa11.17□□□□□ -0.62
SFXN1-211ENST00000515736 USP17L22D6RA61 530 aa11.17□□□□□ -0.62
SFXN1-211ENST00000515736 USP17L17D6RBQ6 530 aa11.17□□□□□ -0.62
SFXN1-211ENST00000515736 USP17L19D6RCP7 530 aa11.17□□□□□ -0.62
SFXN1-211ENST00000515736 USP17L20D6RJB6 530 aa11.17□□□□□ -0.62
SFXN1-211ENST00000515736 JUNDP17535 347 aa11.17□□□□□ -0.62
SFXN1-211ENST00000515736 KCNA6P17658 529 aa11.17□□□□□ -0.62
SFXN1-211ENST00000515736 USP17L24Q0WX57 530 aa11.17□□□□□ -0.62
SFXN1-211ENST00000515736 CRTC2Q53ET0 693 aaPredicted RBP11.17□□□□□ -0.62
SFXN1-211ENST00000515736 DEPDC4Q8N2C3 294 aa11.17□□□□□ -0.62
SFXN1-211ENST00000515736 MKRN1Q9UHC7 482 aaKnown RBP11.17□□□□□ -0.62
SFXN1-211ENST00000515736 IFT172Q9UG01 1749 aa11.17□□□□□ -0.62
SFXN1-211ENST00000515736 NWD1Q149M9 1564 aa11.16□□□□□ -0.62
SFXN1-211ENST00000515736 PHLPP1O60346 1717 aa11.16□□□□□ -0.62
SFXN1-211ENST00000515736 SCUBE3Q8IX30 993 aa11.16□□□□□ -0.62
SFXN1-211ENST00000515736 MRPL50Q8N5N7 158 aaKnown RBP11.16□□□□□ -0.62
SFXN1-211ENST00000515736 HIRIP3Q9BW71 556 aaPredicted RBP11.16□□□□□ -0.62
SFXN1-211ENST00000515736 SLC52A1Q9NWF4 448 aa11.16□□□□□ -0.62
SFXN1-211ENST00000515736 CEP126Q9P2H0 1117 aa11.16□□□□□ -0.62
SFXN1-211ENST00000515736 NKTRP30414 1462 aaKnown RBP11.16□□□□□ -0.62
SFXN1-211ENST00000515736 FAM135BQ49AJ0 1406 aa11.16□□□□□ -0.62
SFXN1-211ENST00000515736 CLTCL1P53675 1640 aa11.16□□□□□ -0.62
SFXN1-211ENST00000515736 CHD2O14647 1828 aaKnown RBP11.16□□□□□ -0.62
SFXN1-211ENST00000515736 KIF7Q2M1P5 1343 aa11.15□□□□□ -0.62
SFXN1-211ENST00000515736 TK2O00142 265 aa11.15□□□□□ -0.62
SFXN1-211ENST00000515736 FMNL1O95466 1100 aaPredicted RBP11.15□□□□□ -0.62
SFXN1-211ENST00000515736 SSFA2P28290 1259 aa11.15□□□□□ -0.62
SFXN1-211ENST00000515736 PTK7Q13308 1070 aa11.15□□□□□ -0.62
SFXN1-211ENST00000515736 ZNF687Q8N1G0 1237 aa11.15□□□□□ -0.62
SFXN1-211ENST00000515736 SLAIN2Q9P270 581 aa11.15□□□□□ -0.62
SFXN1-211ENST00000515736 GPSM3Q9Y4H4 160 aa11.15□□□□□ -0.62
SFXN1-211ENST00000515736 MSH6P52701 1360 aa11.15□□□□□ -0.63
SFXN1-211ENST00000515736 TMEM131LA2VDJ0 1609 aa11.13□□□□□ -0.63
SFXN1-211ENST00000515736 MYOM2P54296 1465 aa11.13□□□□□ -0.63
SFXN1-211ENST00000515736 RIMS2Q9UQ26 1411 aa11.13□□□□□ -0.63
SFXN1-211ENST00000515736 ARID4AP29374 1257 aaPredicted RBP11.13□□□□□ -0.63
SFXN1-211ENST00000515736 CTHP32929 405 aa11.13□□□□□ -0.63
SFXN1-211ENST00000515736 NCOA4Q13772 614 aa11.13□□□□□ -0.63
SFXN1-211ENST00000515736 SLFNL1Q499Z3 407 aa11.13□□□□□ -0.63
SFXN1-211ENST00000515736 PDXDC2PQ6P474 469 aa11.13□□□□□ -0.63
SFXN1-211ENST00000515736 LARP1Q6PKG0 1096 aaKnown RBP11.13□□□□□ -0.63
SFXN1-211ENST00000515736 PHTF2Q8N3S3 785 aa11.13□□□□□ -0.63
SFXN1-211ENST00000515736 DCAF11Q8TEB1 546 aa11.13□□□□□ -0.63
SFXN1-211ENST00000515736 ZNF592Q92610 1267 aa11.13□□□□□ -0.63
SFXN1-211ENST00000515736 CARD11Q9BXL7 1154 aa11.13□□□□□ -0.63
SFXN1-211ENST00000515736 ATP5J2-PTCD1G3V325 749 aa11.12□□□□□ -0.63
SFXN1-211ENST00000515736 LZTS3O60299 673 aaPredicted RBP11.12□□□□□ -0.63
SFXN1-211ENST00000515736 RASA1P20936 1047 aa11.12□□□□□ -0.63
SFXN1-211ENST00000515736 MCCD1P59942 119 aaPredicted RBP11.12□□□□□ -0.63
SFXN1-211ENST00000515736 PTK2Q05397 1052 aa11.12□□□□□ -0.63
SFXN1-211ENST00000515736 FAM200AQ8TCP9 573 aa11.12□□□□□ -0.63
SFXN1-211ENST00000515736 CLP1Q92989 425 aaKnown RBP11.12□□□□□ -0.63
SFXN1-211ENST00000515736 OCSTAMPQ9BR26 566 aa11.12□□□□□ -0.63
SFXN1-211ENST00000515736 RGS17Q9UGC6 210 aaPredicted RBP11.12□□□□□ -0.63
SFXN1-211ENST00000515736 NR1I2O75469 434 aa11.11□□□□□ -0.63
SFXN1-211ENST00000515736 APLP1P51693 650 aa11.11□□□□□ -0.63
SFXN1-211ENST00000515736 RNF135Q8IUD6 432 aa11.11□□□□□ -0.63
SFXN1-211ENST00000515736 PLPP7Q8NBV4 271 aa11.11□□□□□ -0.63
SFXN1-211ENST00000515736 GPKOWQ92917 476 aaPredicted RBP eCLIP11.11□□□□□ -0.63
SFXN1-211ENST00000515736 CDCA7Q9BWT1 371 aaPredicted RBP11.11□□□□□ -0.63
SFXN1-211ENST00000515736 PRKRIP1Q9H875 184 aaPredicted RBP11.11□□□□□ -0.63
SFXN1-211ENST00000515736 PLEKHG1Q9ULL1 1385 aa11.11□□□□□ -0.63
SFXN1-211ENST00000515736 ZFYVE9O95405 1425 aa11.1□□□□□ -0.63
SFXN1-211ENST00000515736 CCNYL3P0C7X3 344 aa11.1□□□□□ -0.63
SFXN1-211ENST00000515736 PPP4CP60510 307 aa11.1□□□□□ -0.63
SFXN1-211ENST00000515736 ARMC2Q8NEN0 867 aa11.1□□□□□ -0.63
SFXN1-211ENST00000515736 EVA1BQ9NVM1 165 aa11.1□□□□□ -0.63
SFXN1-211ENST00000515736 SETD1AO15047 1707 aaKnown RBP11.09□□□□□ -0.63
SFXN1-211ENST00000515736 ANKMY2Q8IV38 441 aa11.09□□□□□ -0.63
SFXN1-211ENST00000515736 PCDHB9Q9Y5E1 797 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms