RNA–Protein interactions for RNA: ENST00000515198.5

PTCD2-210, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 881 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-210ENST00000515198 MSL1Q68DK7 614 aa16.41■□□□□ 0.22
PTCD2-210ENST00000515198 THUMPD2Q9BTF0 503 aaKnown RBP16.41■□□□□ 0.22
PTCD2-210ENST00000515198 RRP7AQ9Y3A4 280 aaKnown RBP16.41■□□□□ 0.22
PTCD2-210ENST00000515198 KDM3BQ7LBC6 1761 aa16.41■□□□□ 0.22
PTCD2-210ENST00000515198 C4AP0C0L4 1744 aa16.4■□□□□ 0.22
PTCD2-210ENST00000515198 RFC4P35249 363 aa16.4■□□□□ 0.22
PTCD2-210ENST00000515198 INTS5Q6P9B9 1019 aaKnown RBP16.4■□□□□ 0.22
PTCD2-210ENST00000515198 ARXQ96QS3 562 aa16.4■□□□□ 0.22
PTCD2-210ENST00000515198 ARHGEF1Q92888 912 aaKnown RBP16.39■□□□□ 0.21
PTCD2-210ENST00000515198 DCAF8L1A6NGE4 600 aa16.38■□□□□ 0.21
PTCD2-210ENST00000515198 SNRPA1P09661 255 aaKnown RBP16.38■□□□□ 0.21
PTCD2-210ENST00000515198 MIS18AQ9NYP9 233 aa16.38■□□□□ 0.21
PTCD2-210ENST00000515198 ZBTB1Q9Y2K1 713 aa16.37■□□□□ 0.21
PTCD2-210ENST00000515198 SOS1Q07889 1333 aaPredicted RBP16.37■□□□□ 0.21
PTCD2-210ENST00000515198 CANXP27824 592 aaKnown RBP16.36■□□□□ 0.21
PTCD2-210ENST00000515198 FHDC1Q9C0D6 1143 aaPredicted RBP16.36■□□□□ 0.21
PTCD2-210ENST00000515198 BABAM1Q9NWV8 329 aa16.36■□□□□ 0.21
PTCD2-210ENST00000515198 COL15A1P39059 1388 aa16.36■□□□□ 0.21
PTCD2-210ENST00000515198 LAMB4A4D0S4 1761 aa16.36■□□□□ 0.21
PTCD2-210ENST00000515198 APAF1O14727 1248 aa16.35■□□□□ 0.21
PTCD2-210ENST00000515198 KLHL34Q8N239 644 aa16.35■□□□□ 0.21
PTCD2-210ENST00000515198 NLGN1Q8N2Q7 840 aa16.35■□□□□ 0.21
PTCD2-210ENST00000515198 RNF216Q9NWF9 866 aaPredicted RBP16.35■□□□□ 0.21
PTCD2-210ENST00000515198 TSPYL4Q9UJ04 414 aa16.35■□□□□ 0.21
PTCD2-210ENST00000515198 TRIM35Q9UPQ4 493 aa16.35■□□□□ 0.21
PTCD2-210ENST00000515198 A0A087WZG4 1122 aa16.34■□□□□ 0.21
PTCD2-210ENST00000515198 ZPR1O75312 459 aa16.34■□□□□ 0.21
PTCD2-210ENST00000515198 NPM2Q86SE8 214 aaKnown RBP16.34■□□□□ 0.21
PTCD2-210ENST00000515198 SYT17Q9BSW7 474 aa16.34■□□□□ 0.21
PTCD2-210ENST00000515198 USP16Q9Y5T5 823 aa16.34■□□□□ 0.21
PTCD2-210ENST00000515198 USP42Q9H9J4 1324 aaKnown RBP16.34■□□□□ 0.21
PTCD2-210ENST00000515198 GYS1P13807 737 aa16.33■□□□□ 0.2
PTCD2-210ENST00000515198 EIF4A1P60842 406 aaKnown RBP16.33■□□□□ 0.2
PTCD2-210ENST00000515198 PRAMEF22A3QJZ6 481 aa16.32■□□□□ 0.2
PTCD2-210ENST00000515198 A1BGP04217 495 aa16.32■□□□□ 0.2
PTCD2-210ENST00000515198 IL6STP40189 918 aaPredicted RBP16.32■□□□□ 0.2
PTCD2-210ENST00000515198 SRP68Q9UHB9 627 aaKnown RBP16.32■□□□□ 0.2
PTCD2-210ENST00000515198 NARFQ9UHQ1 456 aa16.32■□□□□ 0.2
PTCD2-210ENST00000515198 ZNF330Q9Y3S2 320 aaPredicted RBP16.32■□□□□ 0.2
PTCD2-210ENST00000515198 GIGYF1O75420 1035 aaPredicted RBP16.31■□□□□ 0.2
PTCD2-210ENST00000515198 MMP10P09238 476 aa16.31■□□□□ 0.2
PTCD2-210ENST00000515198 EIF5P55010 431 aaKnown RBP16.31■□□□□ 0.2
PTCD2-210ENST00000515198 CALD1Q05682 793 aaKnown RBP16.31■□□□□ 0.2
PTCD2-210ENST00000515198 LAS1LQ9Y4W2 734 aaKnown RBP16.31■□□□□ 0.2
PTCD2-210ENST00000515198 CHL1O00533 1208 aa16.3■□□□□ 0.2
PTCD2-210ENST00000515198 USPL1Q5W0Q7 1092 aa16.3■□□□□ 0.2
PTCD2-210ENST00000515198 SRCAPQ6ZRS2 3230 aa16.29■□□□□ 0.2
PTCD2-210ENST00000515198 FAM9BQ8IZU0 186 aa16.29■□□□□ 0.2
PTCD2-210ENST00000515198 FKBP8Q14318 412 aa16.28■□□□□ 0.2
PTCD2-210ENST00000515198 CFAP44Q96MT7 982 aa16.28■□□□□ 0.2
PTCD2-210ENST00000515198 CD2APQ9Y5K6 639 aa16.28■□□□□ 0.2
PTCD2-210ENST00000515198 PARP3Q9Y6F1 533 aa16.28■□□□□ 0.2
PTCD2-210ENST00000515198 SCN7AQ01118 1682 aa16.27■□□□□ 0.2
PTCD2-210ENST00000515198 PIP4K2AP48426 406 aaPredicted RBP16.27■□□□□ 0.2
PTCD2-210ENST00000515198 TBC1D2BQ9UPU7 963 aa16.27■□□□□ 0.2
PTCD2-210ENST00000515198 GNAI1P63096 354 aa16.26■□□□□ 0.19
PTCD2-210ENST00000515198 CCDC27Q2M243 656 aa16.26■□□□□ 0.19
PTCD2-210ENST00000515198 DZIP3Q86Y13 1208 aaKnown RBP16.26■□□□□ 0.19
PTCD2-210ENST00000515198 IFT57Q9NWB7 429 aa16.26■□□□□ 0.19
PTCD2-210ENST00000515198 BCORQ6W2J9 1755 aa16.26■□□□□ 0.19
PTCD2-210ENST00000515198 NBPF26B4DH59 902 aa16.25■□□□□ 0.19
PTCD2-210ENST00000515198 NCBP3Q53F19 620 aaKnown RBP16.25■□□□□ 0.19
PTCD2-210ENST00000515198 NBPF10Q6P3W6 841 aaKnown RBP16.25■□□□□ 0.19
PTCD2-210ENST00000515198 NBPF15Q8N660 670 aa16.25■□□□□ 0.19
PTCD2-210ENST00000515198 KIF13BQ9NQT8 1826 aa16.24■□□□□ 0.19
PTCD2-210ENST00000515198 ERBB4Q15303 1308 aa16.24■□□□□ 0.19
PTCD2-210ENST00000515198 TM4SF1P30408 202 aa16.24■□□□□ 0.19
PTCD2-210ENST00000515198 NLGN2Q8NFZ4 835 aa16.24■□□□□ 0.19
PTCD2-210ENST00000515198 BCL2L12Q9HB09 334 aa16.24■□□□□ 0.19
PTCD2-210ENST00000515198 MBIPQ9NS73 344 aa16.24■□□□□ 0.19
PTCD2-210ENST00000515198 CCER2I3L3R5 266 aa16.23■□□□□ 0.19
PTCD2-210ENST00000515198 ZNF853P0CG23 659 aa16.23■□□□□ 0.19
PTCD2-210ENST00000515198 EIF2S2P20042 333 aaKnown RBP16.23■□□□□ 0.19
PTCD2-210ENST00000515198 DDR1Q08345 913 aa16.23■□□□□ 0.19
PTCD2-210ENST00000515198 NFIXQ14938 502 aa16.23■□□□□ 0.19
PTCD2-210ENST00000515198 WWC1Q8IX03 1113 aa16.23■□□□□ 0.19
PTCD2-210ENST00000515198 C10orf71Q711Q0 1435 aa16.22■□□□□ 0.19
PTCD2-210ENST00000515198 SENP3-EIF4A1A0A087X0R7 540 aa16.22■□□□□ 0.19
PTCD2-210ENST00000515198 POLRMTO00411 1230 aaKnown RBP16.22■□□□□ 0.19
PTCD2-210ENST00000515198 CAMTA2O94983 1202 aa16.22■□□□□ 0.19
PTCD2-210ENST00000515198 HOXB7P09629 217 aa16.22■□□□□ 0.19
PTCD2-210ENST00000515198 MYL6BP14649 208 aa16.22■□□□□ 0.19
PTCD2-210ENST00000515198 DIEXFQ68CQ4 756 aaKnown RBP16.22■□□□□ 0.19
PTCD2-210ENST00000515198 ZNF652Q9Y2D9 606 aa16.22■□□□□ 0.19
PTCD2-210ENST00000515198 AFDNP55196 1824 aaKnown RBP16.22■□□□□ 0.19
PTCD2-210ENST00000515198 CLEC4GQ6UXB4 293 aa16.21■□□□□ 0.19
PTCD2-210ENST00000515198 BICDL1Q6ZP65 573 aa16.21■□□□□ 0.19
PTCD2-210ENST00000515198 NGEFQ8N5V2 710 aa16.21■□□□□ 0.19
PTCD2-210ENST00000515198 NRXN2Q9P2S2 1712 aa16.2■□□□□ 0.18
PTCD2-210ENST00000515198 RGL2O15211 777 aa16.2■□□□□ 0.18
PTCD2-210ENST00000515198 SERPINB2P05120 415 aa16.2■□□□□ 0.18
PTCD2-210ENST00000515198 GPR162Q16538 588 aa16.2■□□□□ 0.18
PTCD2-210ENST00000515198 KRT24Q2M2I5 525 aa16.2■□□□□ 0.18
PTCD2-210ENST00000515198 TBC1D9BQ66K14 1250 aa16.2■□□□□ 0.18
PTCD2-210ENST00000515198 KIF6Q6ZMV9 814 aa16.2■□□□□ 0.18
PTCD2-210ENST00000515198 PELP1Q8IZL8 1130 aaKnown RBP16.2■□□□□ 0.18
PTCD2-210ENST00000515198 SALL2Q9Y467 1007 aaPredicted RBP16.2■□□□□ 0.18
PTCD2-210ENST00000515198 IL16Q14005 1332 aa16.19■□□□□ 0.18
PTCD2-210ENST00000515198 TGFB2P61812 414 aa16.19■□□□□ 0.18
PTCD2-210ENST00000515198 DUSP27Q5VZP5 1158 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms