RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 EML1O00423 815 aa8.31□□□□□ -1.08
RFC1-216ENST00000514572 CDK2AP1O14519 115 aa8.31□□□□□ -1.08
RFC1-216ENST00000514572 CHMP7Q8WUX9 453 aaPredicted RBP8.31□□□□□ -1.08
RFC1-216ENST00000514572 VTI1AQ96AJ9 217 aa8.31□□□□□ -1.08
RFC1-216ENST00000514572 C8orf37Q96NL8 207 aa8.31□□□□□ -1.08
RFC1-216ENST00000514572 RAB6BQ9NRW1 208 aa8.31□□□□□ -1.08
RFC1-216ENST00000514572 LDLRAD1Q5T700 205 aa8.3□□□□□ -1.08
RFC1-216ENST00000514572 ALKBH2Q6NS38 261 aa8.3□□□□□ -1.08
RFC1-216ENST00000514572 ALKBH8Q96BT7 664 aaKnown RBP8.3□□□□□ -1.08
RFC1-216ENST00000514572 ESYT1Q9BSJ8 1104 aa8.3□□□□□ -1.08
RFC1-216ENST00000514572 FHDC1Q9C0D6 1143 aaPredicted RBP8.3□□□□□ -1.08
RFC1-216ENST00000514572 CCDC87Q9NVE4 849 aa8.3□□□□□ -1.08
RFC1-216ENST00000514572 EMILIN1Q9Y6C2 1016 aa8.3□□□□□ -1.08
RFC1-216ENST00000514572 GPR182O15218 404 aa8.29□□□□□ -1.08
RFC1-216ENST00000514572 ADH1AP07327 375 aa8.29□□□□□ -1.08
RFC1-216ENST00000514572 CLN3Q13286 438 aa8.29□□□□□ -1.08
RFC1-216ENST00000514572 ZDHHC1Q8WTX9 485 aa8.29□□□□□ -1.08
RFC1-216ENST00000514572 DMRTB1Q96MA1 342 aa8.29□□□□□ -1.08
RFC1-216ENST00000514572 PRKD2Q9BZL6 878 aa8.29□□□□□ -1.08
RFC1-216ENST00000514572 PGPEP1Q9NXJ5 209 aa8.29□□□□□ -1.08
RFC1-216ENST00000514572 BRPF3Q9ULD4 1205 aa8.29□□□□□ -1.08
RFC1-216ENST00000514572 ZBTB39O15060 712 aa8.28□□□□□ -1.08
RFC1-216ENST00000514572 TEAD4Q15561 434 aa8.28□□□□□ -1.08
RFC1-216ENST00000514572 CNKSR1Q969H4 720 aa8.28□□□□□ -1.08
RFC1-216ENST00000514572 MRGPRX2Q96LB1 330 aa8.28□□□□□ -1.08
RFC1-216ENST00000514572 EHHADHQ08426 723 aa8.27□□□□□ -1.09
RFC1-216ENST00000514572 TLR1Q15399 786 aa8.27□□□□□ -1.09
RFC1-216ENST00000514572 GJD3Q8N144 294 aa8.27□□□□□ -1.09
RFC1-216ENST00000514572 ABTB2Q8N961 1025 aa8.27□□□□□ -1.09
RFC1-216ENST00000514572 SH3PXD2AQ5TCZ1 1133 aa8.26□□□□□ -1.09
RFC1-216ENST00000514572 Q6ZVU0 165 aa8.26□□□□□ -1.09
RFC1-216ENST00000514572 NBPF15Q8N660 670 aa8.26□□□□□ -1.09
RFC1-216ENST00000514572 KLF16Q9BXK1 252 aaPredicted RBP8.26□□□□□ -1.09
RFC1-216ENST00000514572 BACH2Q9BYV9 841 aa8.26□□□□□ -1.09
RFC1-216ENST00000514572 PRPF40AO75400 957 aaKnown RBP8.25□□□□□ -1.09
RFC1-216ENST00000514572 ETFBKMTQ8IXQ9 262 aa8.25□□□□□ -1.09
RFC1-216ENST00000514572 SERTM1A2A2V5 107 aa8.24□□□□□ -1.09
RFC1-216ENST00000514572 PDE3BQ13370 1112 aa8.24□□□□□ -1.09
RFC1-216ENST00000514572 RTN1Q16799 776 aa8.24□□□□□ -1.09
RFC1-216ENST00000514572 TSNAXIP1Q2TAA8 658 aa8.24□□□□□ -1.09
RFC1-216ENST00000514572 ATCAYQ86WG3 371 aa8.24□□□□□ -1.09
RFC1-216ENST00000514572 USP35Q9P2H5 1018 aa8.24□□□□□ -1.09
RFC1-216ENST00000514572 V9GY48 417 aaPredicted RBP8.24□□□□□ -1.09
RFC1-216ENST00000514572 SHROOM4Q9ULL8 1493 aa8.24□□□□□ -1.09
RFC1-216ENST00000514572 LDHBP07195 334 aaKnown RBP8.23□□□□□ -1.09
RFC1-216ENST00000514572 BRD2P25440 801 aaKnown RBP8.23□□□□□ -1.09
RFC1-216ENST00000514572 NOS2P35228 1153 aa8.23□□□□□ -1.09
RFC1-216ENST00000514572 ZC3H6P61129 1189 aaKnown RBP8.23□□□□□ -1.09
RFC1-216ENST00000514572 FGD1P98174 961 aa8.23□□□□□ -1.09
RFC1-216ENST00000514572 NNTQ13423 1086 aa8.23□□□□□ -1.09
RFC1-216ENST00000514572 ENOX2Q16206 610 aaKnown RBP8.23□□□□□ -1.09
RFC1-216ENST00000514572 TMC4Q7Z404 712 aa8.23□□□□□ -1.09
RFC1-216ENST00000514572 PPARGC1BQ86YN6 1023 aaKnown RBP8.23□□□□□ -1.09
RFC1-216ENST00000514572 ALDH16A1Q8IZ83 802 aa8.23□□□□□ -1.09
RFC1-216ENST00000514572 SCAMP3O14828 347 aaKnown RBP8.22□□□□□ -1.09
RFC1-216ENST00000514572 GFRA3O60609 400 aa8.22□□□□□ -1.09
RFC1-216ENST00000514572 MZF1P28698 734 aaPredicted RBP8.22□□□□□ -1.09
RFC1-216ENST00000514572 PTGIRP43119 386 aa8.22□□□□□ -1.09
RFC1-216ENST00000514572 HDLBPQ00341 1268 aaKnown RBP8.22□□□□□ -1.09
RFC1-216ENST00000514572 PLCB3Q01970 1234 aa8.22□□□□□ -1.09
RFC1-216ENST00000514572 CENPCQ03188 943 aa8.22□□□□□ -1.09
RFC1-216ENST00000514572 CBLBQ13191 982 aa8.22□□□□□ -1.09
RFC1-216ENST00000514572 Q6ZNB5 142 aa8.22□□□□□ -1.09
RFC1-216ENST00000514572 L3MBTL2Q969R5 705 aa8.22□□□□□ -1.09
RFC1-216ENST00000514572 BCL11AQ9H165 835 aa8.22□□□□□ -1.09
RFC1-216ENST00000514572 PARP2Q9UGN5 583 aa8.22□□□□□ -1.09
RFC1-216ENST00000514572 CHMP3Q9Y3E7 222 aa8.22□□□□□ -1.09
RFC1-216ENST00000514572 SLC19A1P41440 591 aa8.21□□□□□ -1.1
RFC1-216ENST00000514572 DAB2P98082 770 aa8.21□□□□□ -1.1
RFC1-216ENST00000514572 C11orf91Q3C1V1 193 aa8.21□□□□□ -1.1
RFC1-216ENST00000514572 DUSP9Q99956 384 aaKnown RBP8.21□□□□□ -1.1
RFC1-216ENST00000514572 RNF19AQ9NV58 838 aa8.21□□□□□ -1.1
RFC1-216ENST00000514572 POLIQ9UNA4 740 aa8.21□□□□□ -1.1
RFC1-216ENST00000514572 PDGFAP04085 211 aa8.2□□□□□ -1.1
RFC1-216ENST00000514572 USP5P45974 858 aa8.2□□□□□ -1.1
RFC1-216ENST00000514572 MAPK8P45983 427 aa8.2□□□□□ -1.1
RFC1-216ENST00000514572 RAD51AP2Q09MP3 1159 aa8.2□□□□□ -1.1
RFC1-216ENST00000514572 DGKZQ13574 1117 aa8.2□□□□□ -1.1
RFC1-216ENST00000514572 LAPTM4AQ15012 233 aa8.2□□□□□ -1.1
RFC1-216ENST00000514572 C1orf53Q5VUE5 145 aa8.2□□□□□ -1.1
RFC1-216ENST00000514572 SPRYD7Q5W111 196 aa8.2□□□□□ -1.1
RFC1-216ENST00000514572 METTL16Q86W50 562 aaKnown RBP8.2□□□□□ -1.1
RFC1-216ENST00000514572 C7orf43Q8WVR3 580 aa8.2□□□□□ -1.1
RFC1-216ENST00000514572 SREK1Q8WXA9 508 aaKnown RBP8.2□□□□□ -1.1
RFC1-216ENST00000514572 ITPKCQ96DU7 683 aa8.2□□□□□ -1.1
RFC1-216ENST00000514572 SETDB2Q96T68 719 aa8.2□□□□□ -1.1
RFC1-216ENST00000514572 CFHR5Q9BXR6 569 aa8.2□□□□□ -1.1
RFC1-216ENST00000514572 PKD2L1Q9P0L9 805 aa8.2□□□□□ -1.1
RFC1-216ENST00000514572 WWC3Q9ULE0 1092 aa8.2□□□□□ -1.1
RFC1-216ENST00000514572 ZAP70P43403 619 aa8.19□□□□□ -1.1
RFC1-216ENST00000514572 TMC1Q8TDI8 760 aa8.19□□□□□ -1.1
RFC1-216ENST00000514572 NGLY1Q96IV0 654 aa8.19□□□□□ -1.1
RFC1-216ENST00000514572 FAM161BQ96MY7 647 aa8.19□□□□□ -1.1
RFC1-216ENST00000514572 PHACTR1Q9C0D0 580 aa8.19□□□□□ -1.1
RFC1-216ENST00000514572 KLK14Q9P0G3 267 aa8.19□□□□□ -1.1
RFC1-216ENST00000514572 BCS1LQ9Y276 419 aa8.19□□□□□ -1.1
RFC1-216ENST00000514572 ALDH1A1P00352 501 aa8.18□□□□□ -1.1
RFC1-216ENST00000514572 AAMPQ13685 434 aa8.18□□□□□ -1.1
RFC1-216ENST00000514572 EDEM1Q92611 657 aa8.18□□□□□ -1.1
RFC1-216ENST00000514572 IFT43Q96FT9 208 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms