RNA–Protein interactions for RNA: ENST00000513893.5

LINC00461-215, long intergenic non-protein coding RNA 461, humanhuman

TSL 4

Gene LINC00461, Length 555 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-215ENST00000513893 USP42Q9H9J4 1324 aaKnown RBP21.81■■□□□ 1.08
LINC00461-215ENST00000513893 NFE2L2Q16236 605 aa21.81■■□□□ 1.08
LINC00461-215ENST00000513893 USPL1Q5W0Q7 1092 aa21.8■■□□□ 1.08
LINC00461-215ENST00000513893 VSIG10Q8N0Z9 540 aa21.8■■□□□ 1.08
LINC00461-215ENST00000513893 FMNL2Q96PY5 1086 aa21.8■■□□□ 1.08
LINC00461-215ENST00000513893 ZNF330Q9Y3S2 320 aaPredicted RBP21.8■■□□□ 1.08
LINC00461-215ENST00000513893 A1BGP04217 495 aa21.79■■□□□ 1.08
LINC00461-215ENST00000513893 DDR1Q08345 913 aa21.79■■□□□ 1.08
LINC00461-215ENST00000513893 NLGN1Q8N2Q7 840 aa21.79■■□□□ 1.08
LINC00461-215ENST00000513893 RRP7AQ9Y3A4 280 aaKnown RBP21.79■■□□□ 1.08
LINC00461-215ENST00000513893 CD2APQ9Y5K6 639 aa21.79■■□□□ 1.08
LINC00461-215ENST00000513893 MAPK8IP3Q9UPT6 1336 aa21.79■■□□□ 1.08
LINC00461-215ENST00000513893 COL15A1P39059 1388 aa21.78■■□□□ 1.08
LINC00461-215ENST00000513893 NEFMP07197 916 aa21.78■■□□□ 1.08
LINC00461-215ENST00000513893 USP16Q9Y5T5 823 aa21.78■■□□□ 1.08
LINC00461-215ENST00000513893 GOLGB1Q14789 3259 aaKnown RBP21.76■■□□□ 1.07
LINC00461-215ENST00000513893 HTATSF1O43719 755 aaKnown RBP21.76■■□□□ 1.07
LINC00461-215ENST00000513893 STARD3NLO95772 234 aa21.76■■□□□ 1.07
LINC00461-215ENST00000513893 BCL2L12Q9HB09 334 aa21.76■■□□□ 1.07
LINC00461-215ENST00000513893 ZPR1O75312 459 aa21.75■■□□□ 1.07
LINC00461-215ENST00000513893 TAF7Q15545 349 aaPredicted RBP21.75■■□□□ 1.07
LINC00461-215ENST00000513893 PARP3Q9Y6F1 533 aa21.75■■□□□ 1.07
LINC00461-215ENST00000513893 EIF5P55010 431 aaKnown RBP21.74■■□□□ 1.07
LINC00461-215ENST00000513893 NEUROD2Q15784 382 aa21.74■■□□□ 1.07
LINC00461-215ENST00000513893 CCDC184Q52MB2 194 aa21.74■■□□□ 1.07
LINC00461-215ENST00000513893 ZNF316A6NFI3 1004 aaPredicted RBP21.73■■□□□ 1.07
LINC00461-215ENST00000513893 RIPK4P57078 832 aa21.73■■□□□ 1.07
LINC00461-215ENST00000513893 NARFQ9UHQ1 456 aa21.73■■□□□ 1.07
LINC00461-215ENST00000513893 ADAMTS8Q9UP79 889 aa21.73■■□□□ 1.07
LINC00461-215ENST00000513893 TBC1D2BQ9UPU7 963 aa21.73■■□□□ 1.07
LINC00461-215ENST00000513893 A0A0G2JLW4 131 aa21.72■■□□□ 1.07
LINC00461-215ENST00000513893 BICDL1Q6ZP65 573 aa21.72■■□□□ 1.07
LINC00461-215ENST00000513893 DLG5Q8TDM6 1919 aa21.72■■□□□ 1.07
LINC00461-215ENST00000513893 C10orf71Q711Q0 1435 aa21.72■■□□□ 1.07
LINC00461-215ENST00000513893 PXDNLA1KZ92 1463 aa21.71■■□□□ 1.07
LINC00461-215ENST00000513893 POLRMTO00411 1230 aaKnown RBP21.71■■□□□ 1.07
LINC00461-215ENST00000513893 TMPOP42166 694 aaKnown RBP21.71■■□□□ 1.07
LINC00461-215ENST00000513893 NFIXQ14938 502 aa21.71■■□□□ 1.07
LINC00461-215ENST00000513893 WDR43Q15061 677 aaKnown RBP eCLIP21.71■■□□□ 1.07
LINC00461-215ENST00000513893 DPEP1P16444 411 aa21.7■■□□□ 1.06
LINC00461-215ENST00000513893 TM4SF1P30408 202 aa21.7■■□□□ 1.06
LINC00461-215ENST00000513893 TEX13AQ9BXU3 409 aaPredicted RBP21.7■■□□□ 1.06
LINC00461-215ENST00000513893 PNNQ9H307 717 aaKnown RBP21.7■■□□□ 1.06
LINC00461-215ENST00000513893 SENP3-EIF4A1A0A087X0R7 540 aa21.69■■□□□ 1.06
LINC00461-215ENST00000513893 SNRPA1P09661 255 aaKnown RBP21.69■■□□□ 1.06
LINC00461-215ENST00000513893 NBPF26B4DH59 902 aa21.68■■□□□ 1.06
LINC00461-215ENST00000513893 NBPF10Q6P3W6 841 aaKnown RBP21.68■■□□□ 1.06
LINC00461-215ENST00000513893 NBPF15Q8N660 670 aa21.68■■□□□ 1.06
LINC00461-215ENST00000513893 IL6STP40189 918 aaPredicted RBP21.67■■□□□ 1.06
LINC00461-215ENST00000513893 EIF4A1P60842 406 aaKnown RBP21.67■■□□□ 1.06
LINC00461-215ENST00000513893 TBC1D9BQ66K14 1250 aa21.67■■□□□ 1.06
LINC00461-215ENST00000513893 CCDC24Q8N4L8 307 aa21.67■■□□□ 1.06
LINC00461-215ENST00000513893 CHRNA5P30532 468 aa21.66■■□□□ 1.06
LINC00461-215ENST00000513893 KIAA1551Q9HCM1 1747 aa21.66■■□□□ 1.06
LINC00461-215ENST00000513893 RUNDC1Q96C34 613 aa21.65■■□□□ 1.06
LINC00461-215ENST00000513893 N4BP2Q86UW6 1770 aaPredicted RBP21.64■■□□□ 1.06
LINC00461-215ENST00000513893 CARMIL3Q8ND23 1372 aa21.64■■□□□ 1.06
LINC00461-215ENST00000513893 A0A087WZG4 1122 aa21.64■■□□□ 1.05
LINC00461-215ENST00000513893 CAMTA2O94983 1202 aa21.64■■□□□ 1.05
LINC00461-215ENST00000513893 SERPINB2P05120 415 aa21.64■■□□□ 1.05
LINC00461-215ENST00000513893 NGEFQ8N5V2 710 aa21.64■■□□□ 1.05
LINC00461-215ENST00000513893 TSPYL4Q9UJ04 414 aa21.64■■□□□ 1.05
LINC00461-215ENST00000513893 TRIM35Q9UPQ4 493 aa21.64■■□□□ 1.05
LINC00461-215ENST00000513893 GIGYF1O75420 1035 aaPredicted RBP21.63■■□□□ 1.05
LINC00461-215ENST00000513893 KCNA3P22001 575 aa21.63■■□□□ 1.05
LINC00461-215ENST00000513893 DZIP3Q86Y13 1208 aaKnown RBP21.63■■□□□ 1.05
LINC00461-215ENST00000513893 PNISRQ8TF01 805 aaKnown RBP21.63■■□□□ 1.05
LINC00461-215ENST00000513893 BCS1LQ9Y276 419 aa21.63■■□□□ 1.05
LINC00461-215ENST00000513893 KDM3BQ7LBC6 1761 aa21.63■■□□□ 1.05
LINC00461-215ENST00000513893 GRIN3BO60391 1043 aa21.62■■□□□ 1.05
LINC00461-215ENST00000513893 TGFB2P61812 414 aa21.62■■□□□ 1.05
LINC00461-215ENST00000513893 ZNF784Q8NCA9 323 aaPredicted RBP21.62■■□□□ 1.05
LINC00461-215ENST00000513893 KRT24Q2M2I5 525 aa21.61■■□□□ 1.05
LINC00461-215ENST00000513893 LAS1LQ9Y4W2 734 aaKnown RBP21.61■■□□□ 1.05
LINC00461-215ENST00000513893 KIF13BQ9NQT8 1826 aa21.6■■□□□ 1.05
LINC00461-215ENST00000513893 SCN7AQ01118 1682 aa21.6■■□□□ 1.05
LINC00461-215ENST00000513893 APAF1O14727 1248 aa21.59■■□□□ 1.05
LINC00461-215ENST00000513893 NPM2Q86SE8 214 aaKnown RBP21.59■■□□□ 1.05
LINC00461-215ENST00000513893 MYL6BP14649 208 aa21.58■■□□□ 1.05
LINC00461-215ENST00000513893 NECTIN2Q92692 538 aa21.58■■□□□ 1.05
LINC00461-215ENST00000513893 ANXA1P04083 346 aa21.57■■□□□ 1.04
LINC00461-215ENST00000513893 EIF2S2P20042 333 aaKnown RBP21.57■■□□□ 1.04
LINC00461-215ENST00000513893 LMOD3Q0VAK6 560 aa21.57■■□□□ 1.04
LINC00461-215ENST00000513893 HLFQ16534 295 aa21.57■■□□□ 1.04
LINC00461-215ENST00000513893 TTLL7Q6ZT98 887 aa21.56■■□□□ 1.04
LINC00461-215ENST00000513893 AFDNP55196 1824 aaKnown RBP21.56■■□□□ 1.04
LINC00461-215ENST00000513893 FAM177BA6PVY3 158 aa21.55■■□□□ 1.04
LINC00461-215ENST00000513893 PRR5LQ6MZQ0 368 aa21.55■■□□□ 1.04
LINC00461-215ENST00000513893 PROSER3Q2NL68 480 aa21.54■■□□□ 1.04
LINC00461-215ENST00000513893 LAMB4A4D0S4 1761 aa21.53■■□□□ 1.04
LINC00461-215ENST00000513893 CHD4Q14839 1912 aa21.53■■□□□ 1.04
LINC00461-215ENST00000513893 NRXN2Q9P2S2 1712 aa21.53■■□□□ 1.04
LINC00461-215ENST00000513893 ANP32CO43423 234 aa21.53■■□□□ 1.04
LINC00461-215ENST00000513893 ARHGAP27Q6ZUM4 889 aa21.53■■□□□ 1.04
LINC00461-215ENST00000513893 C2CD5Q86YS7 1000 aa21.53■■□□□ 1.04
LINC00461-215ENST00000513893 SETDB2Q96T68 719 aa21.53■■□□□ 1.04
LINC00461-215ENST00000513893 PIM2Q9P1W9 311 aa21.53■■□□□ 1.04
LINC00461-215ENST00000513893 BCORQ6W2J9 1755 aa21.52■■□□□ 1.04
LINC00461-215ENST00000513893 CHL1O00533 1208 aa21.52■■□□□ 1.04
LINC00461-215ENST00000513893 DALRD3Q5D0E6 543 aaKnown RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms