RNA–Protein interactions for RNA: ENST00000513816.1

RAPGEF2-212, Transcript of Rap guanine nucleotide exchange factor 2, humanhuman

TSL 1 (best)

Gene RAPGEF2, Length 3,670 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF2-212ENST00000513816 NLGN1Q8N2Q7 840 aa9.28□□□□□ -0.92
RAPGEF2-212ENST00000513816 SLC39A6Q13433 755 aa9.28□□□□□ -0.92
RAPGEF2-212ENST00000513816 DNAJC10Q8IXB1 793 aa9.28□□□□□ -0.92
RAPGEF2-212ENST00000513816 TRIM35Q9UPQ4 493 aa9.28□□□□□ -0.92
RAPGEF2-212ENST00000513816 PSDA5PKW4 1024 aaPredicted RBP9.27□□□□□ -0.93
RAPGEF2-212ENST00000513816 EIF4A1P60842 406 aaKnown RBP9.27□□□□□ -0.93
RAPGEF2-212ENST00000513816 TUBGCP6Q96RT7 1819 aa9.27□□□□□ -0.93
RAPGEF2-212ENST00000513816 RFC4P35249 363 aa9.27□□□□□ -0.93
RAPGEF2-212ENST00000513816 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.26□□□□□ -0.93
RAPGEF2-212ENST00000513816 DCTN1Q14203 1278 aa9.26□□□□□ -0.93
RAPGEF2-212ENST00000513816 NEUROD2Q15784 382 aa9.26□□□□□ -0.93
RAPGEF2-212ENST00000513816 SLC4A9Q96Q91 983 aa9.26□□□□□ -0.93
RAPGEF2-212ENST00000513816 MYH16Q9H6N6 1097 aa9.26□□□□□ -0.93
RAPGEF2-212ENST00000513816 MSH5O43196 834 aa9.26□□□□□ -0.93
RAPGEF2-212ENST00000513816 ZNF853P0CG23 659 aa9.26□□□□□ -0.93
RAPGEF2-212ENST00000513816 FAM9BQ8IZU0 186 aa9.26□□□□□ -0.93
RAPGEF2-212ENST00000513816 ZNF652Q9Y2D9 606 aa9.26□□□□□ -0.93
RAPGEF2-212ENST00000513816 ZPR1O75312 459 aa9.26□□□□□ -0.93
RAPGEF2-212ENST00000513816 GIGYF1O75420 1035 aaPredicted RBP9.25□□□□□ -0.93
RAPGEF2-212ENST00000513816 CCDC184Q52MB2 194 aa9.25□□□□□ -0.93
RAPGEF2-212ENST00000513816 PPP1R1BQ9UD71 204 aaPredicted RBP9.25□□□□□ -0.93
RAPGEF2-212ENST00000513816 RRP7AQ9Y3A4 280 aaKnown RBP9.25□□□□□ -0.93
RAPGEF2-212ENST00000513816 COL15A1P39059 1388 aa9.25□□□□□ -0.93
RAPGEF2-212ENST00000513816 COL23A1Q86Y22 540 aaPredicted RBP9.25□□□□□ -0.93
RAPGEF2-212ENST00000513816 DCAF8L1A6NGE4 600 aa9.25□□□□□ -0.93
RAPGEF2-212ENST00000513816 INTS5Q6P9B9 1019 aaKnown RBP9.25□□□□□ -0.93
RAPGEF2-212ENST00000513816 WWC1Q8IX03 1113 aa9.25□□□□□ -0.93
RAPGEF2-212ENST00000513816 NARFQ9UHQ1 456 aa9.25□□□□□ -0.93
RAPGEF2-212ENST00000513816 PDZRN3Q9UPQ7 1066 aa9.25□□□□□ -0.93
RAPGEF2-212ENST00000513816 EIF5P55010 431 aaKnown RBP9.24□□□□□ -0.93
RAPGEF2-212ENST00000513816 USP42Q9H9J4 1324 aaKnown RBP9.24□□□□□ -0.93
RAPGEF2-212ENST00000513816 CLEC4GQ6UXB4 293 aa9.24□□□□□ -0.93
RAPGEF2-212ENST00000513816 ARHGEF1Q92888 912 aaKnown RBP9.23□□□□□ -0.93
RAPGEF2-212ENST00000513816 ZNF428Q96B54 188 aa9.23□□□□□ -0.93
RAPGEF2-212ENST00000513816 MYH14Q7Z406 1995 aaKnown RBP9.23□□□□□ -0.93
RAPGEF2-212ENST00000513816 GOLGA2Q08379 1002 aa9.23□□□□□ -0.93
RAPGEF2-212ENST00000513816 ARXQ96QS3 562 aa9.23□□□□□ -0.93
RAPGEF2-212ENST00000513816 THUMPD2Q9BTF0 503 aaKnown RBP9.23□□□□□ -0.93
RAPGEF2-212ENST00000513816 ZBTB1Q9Y2K1 713 aa9.23□□□□□ -0.93
RAPGEF2-212ENST00000513816 SCN7AQ01118 1682 aa9.22□□□□□ -0.93
RAPGEF2-212ENST00000513816 ERVV-1B6SEH8 477 aa9.22□□□□□ -0.93
RAPGEF2-212ENST00000513816 HSP90AB3PQ58FF7 597 aa9.22□□□□□ -0.93
RAPGEF2-212ENST00000513816 KIF6Q6ZMV9 814 aa9.22□□□□□ -0.93
RAPGEF2-212ENST00000513816 LAS1LQ9Y4W2 734 aaKnown RBP9.22□□□□□ -0.93
RAPGEF2-212ENST00000513816 C4AP0C0L4 1744 aa9.22□□□□□ -0.93
RAPGEF2-212ENST00000513816 E9PSI1 815 aa9.22□□□□□ -0.93
RAPGEF2-212ENST00000513816 PHF14O94880 888 aa9.22□□□□□ -0.93
RAPGEF2-212ENST00000513816 KCNQ4P56696 695 aa9.22□□□□□ -0.93
RAPGEF2-212ENST00000513816 CD2APQ9Y5K6 639 aa9.22□□□□□ -0.93
RAPGEF2-212ENST00000513816 PARP3Q9Y6F1 533 aa9.22□□□□□ -0.93
RAPGEF2-212ENST00000513816 KCNQ3O43525 872 aa9.21□□□□□ -0.93
RAPGEF2-212ENST00000513816 CT47B1P0C2W7 299 aaPredicted RBP9.21□□□□□ -0.93
RAPGEF2-212ENST00000513816 CANXP27824 592 aaKnown RBP9.21□□□□□ -0.93
RAPGEF2-212ENST00000513816 CCDC30Q5VVM6 783 aa9.21□□□□□ -0.93
RAPGEF2-212ENST00000513816 HYPKQ9NX55 129 aa9.21□□□□□ -0.93
RAPGEF2-212ENST00000513816 DBF4Q9UBU7 674 aaPredicted RBP9.21□□□□□ -0.93
RAPGEF2-212ENST00000513816 ZBTB7AO95365 584 aa9.21□□□□□ -0.93
RAPGEF2-212ENST00000513816 SGIP1Q9BQI5 828 aa9.21□□□□□ -0.93
RAPGEF2-212ENST00000513816 DDX21Q9NR30 783 aaKnown RBP eCLIP9.21□□□□□ -0.93
RAPGEF2-212ENST00000513816 MBIPQ9NS73 344 aa9.21□□□□□ -0.93
RAPGEF2-212ENST00000513816 IBTKQ9P2D0 1353 aaPredicted RBP9.21□□□□□ -0.94
RAPGEF2-212ENST00000513816 HDGFL1Q5TGJ6 251 aa9.2□□□□□ -0.94
RAPGEF2-212ENST00000513816 USP16Q9Y5T5 823 aa9.2□□□□□ -0.94
RAPGEF2-212ENST00000513816 RNF123Q5XPI4 1314 aa9.2□□□□□ -0.94
RAPGEF2-212ENST00000513816 BCORQ6W2J9 1755 aa9.2□□□□□ -0.94
RAPGEF2-212ENST00000513816 CACNA1FO60840 1977 aa9.2□□□□□ -0.94
RAPGEF2-212ENST00000513816 GYS1P13807 737 aa9.2□□□□□ -0.94
RAPGEF2-212ENST00000513816 DUSP27Q5VZP5 1158 aa9.2□□□□□ -0.94
RAPGEF2-212ENST00000513816 DZIP3Q86Y13 1208 aaKnown RBP9.2□□□□□ -0.94
RAPGEF2-212ENST00000513816 STK31Q9BXU1 1019 aa9.2□□□□□ -0.94
RAPGEF2-212ENST00000513816 PTGER2P43116 358 aa9.2□□□□□ -0.94
RAPGEF2-212ENST00000513816 ATF5Q9Y2D1 282 aaPredicted RBP9.2□□□□□ -0.94
RAPGEF2-212ENST00000513816 DDX58O95786 925 aaKnown RBP9.19□□□□□ -0.94
RAPGEF2-212ENST00000513816 MIS18AQ9NYP9 233 aa9.19□□□□□ -0.94
RAPGEF2-212ENST00000513816 ZNF521Q96K83 1311 aa9.19□□□□□ -0.94
RAPGEF2-212ENST00000513816 A1BGP04217 495 aa9.19□□□□□ -0.94
RAPGEF2-212ENST00000513816 HSP90B1P14625 803 aaKnown RBP9.19□□□□□ -0.94
RAPGEF2-212ENST00000513816 CARMIL3Q8ND23 1372 aa9.19□□□□□ -0.94
RAPGEF2-212ENST00000513816 MIER1Q8N108 512 aa9.19□□□□□ -0.94
RAPGEF2-212ENST00000513816 PARP10Q53GL7 1025 aa9.18□□□□□ -0.94
RAPGEF2-212ENST00000513816 NYXQ9GZU5 481 aa9.18□□□□□ -0.94
RAPGEF2-212ENST00000513816 ATP10DQ9P241 1426 aa9.18□□□□□ -0.94
RAPGEF2-212ENST00000513816 MAP3K15Q6ZN16 1313 aa9.18□□□□□ -0.94
RAPGEF2-212ENST00000513816 TGFB2P61812 414 aa9.18□□□□□ -0.94
RAPGEF2-212ENST00000513816 USPL1Q5W0Q7 1092 aa9.18□□□□□ -0.94
RAPGEF2-212ENST00000513816 FANCIQ9NVI1 1328 aa9.17□□□□□ -0.94
RAPGEF2-212ENST00000513816 CAMTA2O94983 1202 aa9.17□□□□□ -0.94
RAPGEF2-212ENST00000513816 MMP10P09238 476 aa9.17□□□□□ -0.94
RAPGEF2-212ENST00000513816 TWISTNBQ3B726 338 aaPredicted RBP9.17□□□□□ -0.94
RAPGEF2-212ENST00000513816 SETDB2Q96T68 719 aa9.17□□□□□ -0.94
RAPGEF2-212ENST00000513816 RIC1Q4ADV7 1423 aa9.17□□□□□ -0.94
RAPGEF2-212ENST00000513816 EIF2S2P20042 333 aaKnown RBP9.17□□□□□ -0.94
RAPGEF2-212ENST00000513816 TM4SF1P30408 202 aa9.17□□□□□ -0.94
RAPGEF2-212ENST00000513816 C10orf71Q711Q0 1435 aa9.17□□□□□ -0.94
RAPGEF2-212ENST00000513816 NBPF26B4DH59 902 aa9.16□□□□□ -0.94
RAPGEF2-212ENST00000513816 NBPF10Q6P3W6 841 aaKnown RBP9.16□□□□□ -0.94
RAPGEF2-212ENST00000513816 NBPF15Q8N660 670 aa9.16□□□□□ -0.94
RAPGEF2-212ENST00000513816 ZNF330Q9Y3S2 320 aaPredicted RBP9.16□□□□□ -0.94
RAPGEF2-212ENST00000513816 KIF13BQ9NQT8 1826 aa9.16□□□□□ -0.94
RAPGEF2-212ENST00000513816 NRXN2Q9P2S2 1712 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms