RNA–Protein interactions for RNA: ENST00000513506.5

POLR2J3-218, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-218ENST00000513506 R3HDM1Q15032 1099 aaKnown RBP20.19■□□□□ 0.82
POLR2J3-218ENST00000513506 AMIGO3Q86WK7 504 aa20.19■□□□□ 0.82
POLR2J3-218ENST00000513506 AK7Q96M32 723 aa20.19■□□□□ 0.82
POLR2J3-218ENST00000513506 SPINK5Q9NQ38 1064 aaPredicted RBP20.19■□□□□ 0.82
POLR2J3-218ENST00000513506 TFCP2L1Q9NZI6 479 aa20.19■□□□□ 0.82
POLR2J3-218ENST00000513506 PRAMEF22A3QJZ6 481 aa20.18■□□□□ 0.82
POLR2J3-218ENST00000513506 EIF5P55010 431 aaKnown RBP20.18■□□□□ 0.82
POLR2J3-218ENST00000513506 SLC16A10Q8TF71 515 aa20.18■□□□□ 0.82
POLR2J3-218ENST00000513506 SALL2Q9Y467 1007 aaPredicted RBP20.18■□□□□ 0.82
POLR2J3-218ENST00000513506 LAS1LQ9Y4W2 734 aaKnown RBP20.18■□□□□ 0.82
POLR2J3-218ENST00000513506 MYH14Q7Z406 1995 aaKnown RBP20.17■□□□□ 0.82
POLR2J3-218ENST00000513506 SENP3-EIF4A1A0A087X0R7 540 aa20.17■□□□□ 0.82
POLR2J3-218ENST00000513506 IL6STP40189 918 aaPredicted RBP20.17■□□□□ 0.82
POLR2J3-218ENST00000513506 GOLGA2Q08379 1002 aa20.17■□□□□ 0.82
POLR2J3-218ENST00000513506 MYH16Q9H6N6 1097 aa20.17■□□□□ 0.82
POLR2J3-218ENST00000513506 RTCBQ9Y3I0 505 aaKnown RBP20.17■□□□□ 0.82
POLR2J3-218ENST00000513506 E9PSI1 815 aa20.16■□□□□ 0.82
POLR2J3-218ENST00000513506 GNPATO15228 680 aa20.16■□□□□ 0.82
POLR2J3-218ENST00000513506 SLFN5Q08AF3 891 aa20.16■□□□□ 0.82
POLR2J3-218ENST00000513506 CHMP4AQ9BY43 222 aa20.16■□□□□ 0.82
POLR2J3-218ENST00000513506 ZBTB1Q9Y2K1 713 aa20.16■□□□□ 0.82
POLR2J3-218ENST00000513506 FANCIQ9NVI1 1328 aa20.16■□□□□ 0.82
POLR2J3-218ENST00000513506 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.15■□□□□ 0.82
POLR2J3-218ENST00000513506 DUSP27Q5VZP5 1158 aa20.15■□□□□ 0.82
POLR2J3-218ENST00000513506 COL23A1Q86Y22 540 aaPredicted RBP20.15■□□□□ 0.82
POLR2J3-218ENST00000513506 UBR3Q6ZT12 1888 aa20.15■□□□□ 0.82
POLR2J3-218ENST00000513506 NBPF26B4DH59 902 aa20.14■□□□□ 0.81
POLR2J3-218ENST00000513506 RGL2O15211 777 aa20.14■□□□□ 0.81
POLR2J3-218ENST00000513506 A1BGP04217 495 aa20.14■□□□□ 0.81
POLR2J3-218ENST00000513506 KRT24Q2M2I5 525 aa20.14■□□□□ 0.81
POLR2J3-218ENST00000513506 NBPF10Q6P3W6 841 aaKnown RBP20.14■□□□□ 0.81
POLR2J3-218ENST00000513506 LRP10Q7Z4F1 713 aa20.14■□□□□ 0.81
POLR2J3-218ENST00000513506 NBPF15Q8N660 670 aa20.14■□□□□ 0.81
POLR2J3-218ENST00000513506 C8orf58Q8NAV2 365 aa20.14■□□□□ 0.81
POLR2J3-218ENST00000513506 TSR2Q969E8 191 aaKnown RBP20.14■□□□□ 0.81
POLR2J3-218ENST00000513506 CASZ1Q86V15 1759 aa20.13■□□□□ 0.81
POLR2J3-218ENST00000513506 PDIA6Q15084 440 aa20.13■□□□□ 0.81
POLR2J3-218ENST00000513506 TRAPPC3LQ5T215 181 aa20.13■□□□□ 0.81
POLR2J3-218ENST00000513506 ARHGEF1Q92888 912 aaKnown RBP20.13■□□□□ 0.81
POLR2J3-218ENST00000513506 ZBED9Q6R2W3 1325 aa20.12■□□□□ 0.81
POLR2J3-218ENST00000513506 PSDA5PKW4 1024 aaPredicted RBP20.12■□□□□ 0.81
POLR2J3-218ENST00000513506 PDGFDQ9GZP0 370 aaPredicted RBP20.12■□□□□ 0.81
POLR2J3-218ENST00000513506 LAMB4A4D0S4 1761 aa20.11■□□□□ 0.81
POLR2J3-218ENST00000513506 HNRNPUQ00839 825 aaKnown RBP eCLIP20.11■□□□□ 0.81
POLR2J3-218ENST00000513506 A0A087WZG4 1122 aa20.1■□□□□ 0.81
POLR2J3-218ENST00000513506 TSPYL6Q8N831 410 aa20.1■□□□□ 0.81
POLR2J3-218ENST00000513506 TUBGCP6Q96RT7 1819 aa20.1■□□□□ 0.81
POLR2J3-218ENST00000513506 COL15A1P39059 1388 aa20.09■□□□□ 0.81
POLR2J3-218ENST00000513506 MTFR1LQ9H019 292 aa20.09■□□□□ 0.81
POLR2J3-218ENST00000513506 DDX21Q9NR30 783 aaKnown RBP eCLIP20.09■□□□□ 0.81
POLR2J3-218ENST00000513506 SRCAPQ6ZRS2 3230 aa20.08■□□□□ 0.81
POLR2J3-218ENST00000513506 USP42Q9H9J4 1324 aaKnown RBP20.08■□□□□ 0.81
POLR2J3-218ENST00000513506 VAMP4O75379 141 aa20.08■□□□□ 0.81
POLR2J3-218ENST00000513506 CANXP27824 592 aaKnown RBP20.08■□□□□ 0.81
POLR2J3-218ENST00000513506 HDGFL1Q5TGJ6 251 aa20.08■□□□□ 0.81
POLR2J3-218ENST00000513506 CDCA7LQ96GN5 454 aa20.08■□□□□ 0.81
POLR2J3-218ENST00000513506 SGIP1Q9BQI5 828 aa20.08■□□□□ 0.81
POLR2J3-218ENST00000513506 NARFQ9UHQ1 456 aa20.08■□□□□ 0.81
POLR2J3-218ENST00000513506 EXOSC9Q06265 439 aaKnown RBP20.07■□□□□ 0.8
POLR2J3-218ENST00000513506 TWISTNBQ3B726 338 aaPredicted RBP20.07■□□□□ 0.8
POLR2J3-218ENST00000513506 SMIM5Q71RC9 77 aa20.07■□□□□ 0.8
POLR2J3-218ENST00000513506 DBF4Q9UBU7 674 aaPredicted RBP20.07■□□□□ 0.8
POLR2J3-218ENST00000513506 COL24A1Q17RW2 1714 aa20.07■□□□□ 0.8
POLR2J3-218ENST00000513506 CT47B1P0C2W7 299 aaPredicted RBP20.06■□□□□ 0.8
POLR2J3-218ENST00000513506 RFC4P35249 363 aa20.06■□□□□ 0.8
POLR2J3-218ENST00000513506 ZNF428Q96B54 188 aa20.06■□□□□ 0.8
POLR2J3-218ENST00000513506 PHF14O94880 888 aa20.05■□□□□ 0.8
POLR2J3-218ENST00000513506 GYS1P13807 737 aa20.05■□□□□ 0.8
POLR2J3-218ENST00000513506 EIF2S2P20042 333 aaKnown RBP20.05■□□□□ 0.8
POLR2J3-218ENST00000513506 CCDC30Q5VVM6 783 aa20.05■□□□□ 0.8
POLR2J3-218ENST00000513506 NLGN1Q8N2Q7 840 aa20.05■□□□□ 0.8
POLR2J3-218ENST00000513506 PTGER2P43116 358 aa20.04■□□□□ 0.8
POLR2J3-218ENST00000513506 CLEC4GQ6UXB4 293 aa20.04■□□□□ 0.8
POLR2J3-218ENST00000513506 BCL2L12Q9HB09 334 aa20.04■□□□□ 0.8
POLR2J3-218ENST00000513506 HYPKQ9NX55 129 aa20.04■□□□□ 0.8
POLR2J3-218ENST00000513506 ERVV-1B6SEH8 477 aa20.03■□□□□ 0.8
POLR2J3-218ENST00000513506 ELL2O00472 640 aaPredicted RBP20.03■□□□□ 0.8
POLR2J3-218ENST00000513506 CAMTA2O94983 1202 aa20.03■□□□□ 0.8
POLR2J3-218ENST00000513506 PROSER3Q2NL68 480 aa20.03■□□□□ 0.8
POLR2J3-218ENST00000513506 SPON1Q9HCB6 807 aa20.03■□□□□ 0.8
POLR2J3-218ENST00000513506 CHPF2Q9P2E5 772 aa20.03■□□□□ 0.8
POLR2J3-218ENST00000513506 ZPR1O75312 459 aa20.01■□□□□ 0.79
POLR2J3-218ENST00000513506 PIP4K2AP48426 406 aaPredicted RBP20.01■□□□□ 0.79
POLR2J3-218ENST00000513506 DZIP3Q86Y13 1208 aaKnown RBP20.01■□□□□ 0.79
POLR2J3-218ENST00000513506 C4AP0C0L4 1744 aa20.01■□□□□ 0.79
POLR2J3-218ENST00000513506 ZBTB7AO95365 584 aa20■□□□□ 0.79
POLR2J3-218ENST00000513506 TM4SF1P30408 202 aa20■□□□□ 0.79
POLR2J3-218ENST00000513506 NPM2Q86SE8 214 aaKnown RBP20■□□□□ 0.79
POLR2J3-218ENST00000513506 SRP68Q9UHB9 627 aaKnown RBP20■□□□□ 0.79
POLR2J3-218ENST00000513506 MSH5O43196 834 aa19.99■□□□□ 0.79
POLR2J3-218ENST00000513506 USPL1Q5W0Q7 1092 aa19.99■□□□□ 0.79
POLR2J3-218ENST00000513506 TBC1D2BQ9UPU7 963 aa19.99■□□□□ 0.79
POLR2J3-218ENST00000513506 MAP3K15Q6ZN16 1313 aa19.99■□□□□ 0.79
POLR2J3-218ENST00000513506 MYL6BP14649 208 aa19.98■□□□□ 0.79
POLR2J3-218ENST00000513506 FKBP8Q14318 412 aa19.98■□□□□ 0.79
POLR2J3-218ENST00000513506 TTLL7Q6ZT98 887 aa19.98■□□□□ 0.79
POLR2J3-218ENST00000513506 COPS6Q7L5N1 327 aa19.98■□□□□ 0.79
POLR2J3-218ENST00000513506 LRP5O75197 1615 aa19.98■□□□□ 0.79
POLR2J3-218ENST00000513506 ANXA1P04083 346 aa19.97■□□□□ 0.79
POLR2J3-218ENST00000513506 BRPF1P55201 1214 aaPredicted RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 246 ms