RNA–Protein interactions for RNA: ENST00000513495.5

SH3TC1-223, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-223ENST00000513495 CYP19A1P11511 503 aaPredicted RBP20.27■□□□□ 0.84
SH3TC1-223ENST00000513495 EIF2S2P20042 333 aaKnown RBP20.27■□□□□ 0.84
SH3TC1-223ENST00000513495 KRT24Q2M2I5 525 aa20.27■□□□□ 0.84
SH3TC1-223ENST00000513495 HDGFL1Q5TGJ6 251 aa20.27■□□□□ 0.84
SH3TC1-223ENST00000513495 LINC00116Q8NCU8 138 aa20.27■□□□□ 0.84
SH3TC1-223ENST00000513495 STK32BQ9NY57 414 aa20.27■□□□□ 0.84
SH3TC1-223ENST00000513495 COL5A3P25940 1745 aaPredicted RBP20.27■□□□□ 0.83
SH3TC1-223ENST00000513495 CNTNAP4Q9C0A0 1308 aa20.27■□□□□ 0.83
SH3TC1-223ENST00000513495 CT47B1P0C2W7 299 aaPredicted RBP20.26■□□□□ 0.83
SH3TC1-223ENST00000513495 CRKLP46109 303 aaKnown RBP20.26■□□□□ 0.83
SH3TC1-223ENST00000513495 RC3H1Q5TC82 1133 aaKnown RBP20.26■□□□□ 0.83
SH3TC1-223ENST00000513495 CCDC87Q9NVE4 849 aa20.26■□□□□ 0.83
SH3TC1-223ENST00000513495 USP16Q9Y5T5 823 aa20.26■□□□□ 0.83
SH3TC1-223ENST00000513495 C4BP0C0L5 1744 aa20.26■□□□□ 0.83
SH3TC1-223ENST00000513495 ERBB4Q15303 1308 aa20.26■□□□□ 0.83
SH3TC1-223ENST00000513495 NUP188Q5SRE5 1749 aa20.25■□□□□ 0.83
SH3TC1-223ENST00000513495 CCDC30Q5VVM6 783 aa20.25■□□□□ 0.83
SH3TC1-223ENST00000513495 STK31Q9BXU1 1019 aa20.25■□□□□ 0.83
SH3TC1-223ENST00000513495 PRAMEF22A3QJZ6 481 aa20.24■□□□□ 0.83
SH3TC1-223ENST00000513495 ZNF428Q96B54 188 aa20.24■□□□□ 0.83
SH3TC1-223ENST00000513495 GNPATO15228 680 aa20.23■□□□□ 0.83
SH3TC1-223ENST00000513495 TSPYL6Q8N831 410 aa20.23■□□□□ 0.83
SH3TC1-223ENST00000513495 TFCP2L1Q9NZI6 479 aa20.23■□□□□ 0.83
SH3TC1-223ENST00000513495 RTCBQ9Y3I0 505 aaKnown RBP20.23■□□□□ 0.83
SH3TC1-223ENST00000513495 CANXP27824 592 aaKnown RBP20.22■□□□□ 0.83
SH3TC1-223ENST00000513495 NECTIN2Q92692 538 aa20.22■□□□□ 0.83
SH3TC1-223ENST00000513495 DBF4Q9UBU7 674 aaPredicted RBP20.22■□□□□ 0.83
SH3TC1-223ENST00000513495 VAMP4O75379 141 aa20.21■□□□□ 0.83
SH3TC1-223ENST00000513495 FLAD1Q8NFF5 587 aa20.21■□□□□ 0.83
SH3TC1-223ENST00000513495 A0A087WZG4 1122 aa20.2■□□□□ 0.82
SH3TC1-223ENST00000513495 RPS6KA4O75676 772 aa20.2■□□□□ 0.82
SH3TC1-223ENST00000513495 A1BGP04217 495 aa20.2■□□□□ 0.82
SH3TC1-223ENST00000513495 IL6STP40189 918 aaPredicted RBP20.2■□□□□ 0.82
SH3TC1-223ENST00000513495 SLC15A2Q16348 729 aa20.2■□□□□ 0.82
SH3TC1-223ENST00000513495 INTS5Q6P9B9 1019 aaKnown RBP20.2■□□□□ 0.82
SH3TC1-223ENST00000513495 ZNF330Q9Y3S2 320 aaPredicted RBP20.2■□□□□ 0.82
SH3TC1-223ENST00000513495 ADRA2BP18089 450 aa20.19■□□□□ 0.82
SH3TC1-223ENST00000513495 AKT1S1Q96B36 256 aa20.19■□□□□ 0.82
SH3TC1-223ENST00000513495 DDX21Q9NR30 783 aaKnown RBP eCLIP20.19■□□□□ 0.82
SH3TC1-223ENST00000513495 HYPKQ9NX55 129 aa20.19■□□□□ 0.82
SH3TC1-223ENST00000513495 ZBTB1Q9Y2K1 713 aa20.19■□□□□ 0.82
SH3TC1-223ENST00000513495 MYL6BP14649 208 aa20.18■□□□□ 0.82
SH3TC1-223ENST00000513495 SSFA2P28290 1259 aa20.18■□□□□ 0.82
SH3TC1-223ENST00000513495 CHPF2Q9P2E5 772 aa20.18■□□□□ 0.82
SH3TC1-223ENST00000513495 PHF14O94880 888 aa20.17■□□□□ 0.82
SH3TC1-223ENST00000513495 ZNF827Q17R98 1081 aa20.17■□□□□ 0.82
SH3TC1-223ENST00000513495 TRAPPC3LQ5T215 181 aa20.17■□□□□ 0.82
SH3TC1-223ENST00000513495 MYH14Q7Z406 1995 aaKnown RBP20.17■□□□□ 0.82
SH3TC1-223ENST00000513495 CACNA1FO60840 1977 aa20.16■□□□□ 0.82
SH3TC1-223ENST00000513495 ALDH1L2Q3SY69 923 aa20.16■□□□□ 0.82
SH3TC1-223ENST00000513495 ARXQ96QS3 562 aa20.16■□□□□ 0.82
SH3TC1-223ENST00000513495 ANO8Q9HCE9 1232 aaPredicted RBP20.16■□□□□ 0.82
SH3TC1-223ENST00000513495 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.15■□□□□ 0.82
SH3TC1-223ENST00000513495 NBPF26B4DH59 902 aa20.15■□□□□ 0.82
SH3TC1-223ENST00000513495 MSH5O43196 834 aa20.15■□□□□ 0.82
SH3TC1-223ENST00000513495 RFC4P35249 363 aa20.15■□□□□ 0.82
SH3TC1-223ENST00000513495 PIP4K2AP48426 406 aaPredicted RBP20.15■□□□□ 0.82
SH3TC1-223ENST00000513495 NBPF10Q6P3W6 841 aaKnown RBP20.15■□□□□ 0.82
SH3TC1-223ENST00000513495 NBPF15Q8N660 670 aa20.15■□□□□ 0.82
SH3TC1-223ENST00000513495 COL15A1P39059 1388 aa20.15■□□□□ 0.82
SH3TC1-223ENST00000513495 UBR3Q6ZT12 1888 aa20.15■□□□□ 0.82
SH3TC1-223ENST00000513495 TCERG1O14776 1098 aaKnown RBP20.14■□□□□ 0.81
SH3TC1-223ENST00000513495 SLC4A2P04920 1241 aa20.14■□□□□ 0.81
SH3TC1-223ENST00000513495 EIF5P55010 431 aaKnown RBP20.14■□□□□ 0.81
SH3TC1-223ENST00000513495 KIF6Q6ZMV9 814 aa20.14■□□□□ 0.81
SH3TC1-223ENST00000513495 SMC4Q9NTJ3 1288 aa20.14■□□□□ 0.81
SH3TC1-223ENST00000513495 QSER1Q2KHR3 1735 aa20.13■□□□□ 0.81
SH3TC1-223ENST00000513495 ZPR1O75312 459 aa20.13■□□□□ 0.81
SH3TC1-223ENST00000513495 PDIA6Q15084 440 aa20.13■□□□□ 0.81
SH3TC1-223ENST00000513495 DDX58O95786 925 aaKnown RBP20.12■□□□□ 0.81
SH3TC1-223ENST00000513495 DZIP3Q86Y13 1208 aaKnown RBP20.12■□□□□ 0.81
SH3TC1-223ENST00000513495 ANXA1P04083 346 aa20.11■□□□□ 0.81
SH3TC1-223ENST00000513495 AIMP1Q12904 312 aaKnown RBP20.11■□□□□ 0.81
SH3TC1-223ENST00000513495 PROSER3Q2NL68 480 aa20.11■□□□□ 0.81
SH3TC1-223ENST00000513495 SSH1Q8WYL5 1049 aa20.11■□□□□ 0.81
SH3TC1-223ENST00000513495 PNPLA7Q6ZV29 1317 aa20.1■□□□□ 0.81
SH3TC1-223ENST00000513495 RARSP54136 660 aaKnown RBP20.1■□□□□ 0.81
SH3TC1-223ENST00000513495 R3HDM1Q15032 1099 aaKnown RBP20.1■□□□□ 0.81
SH3TC1-223ENST00000513495 XAGE3Q8WTP9 111 aa20.1■□□□□ 0.81
SH3TC1-223ENST00000513495 ARHGEF1Q92888 912 aaKnown RBP20.1■□□□□ 0.81
SH3TC1-223ENST00000513495 TUBGCP6Q96RT7 1819 aa20.1■□□□□ 0.81
SH3TC1-223ENST00000513495 KIF16BQ96L93 1317 aa20.09■□□□□ 0.81
SH3TC1-223ENST00000513495 COPS6Q7L5N1 327 aa20.09■□□□□ 0.81
SH3TC1-223ENST00000513495 BCL2L13Q9BXK5 485 aa20.09■□□□□ 0.81
SH3TC1-223ENST00000513495 RCAN3Q9UKA8 241 aa20.09■□□□□ 0.81
SH3TC1-223ENST00000513495 ZNF652Q9Y2D9 606 aa20.09■□□□□ 0.81
SH3TC1-223ENST00000513495 FLIIQ13045 1269 aa20.08■□□□□ 0.81
SH3TC1-223ENST00000513495 COL23A1Q86Y22 540 aaPredicted RBP20.08■□□□□ 0.81
SH3TC1-223ENST00000513495 NARFQ9UHQ1 456 aa20.08■□□□□ 0.81
SH3TC1-223ENST00000513495 TBC1D2BQ9UPU7 963 aa20.08■□□□□ 0.81
SH3TC1-223ENST00000513495 IPO8O15397 1037 aaKnown RBP20.07■□□□□ 0.8
SH3TC1-223ENST00000513495 FKBP5Q13451 457 aaPredicted RBP20.07■□□□□ 0.8
SH3TC1-223ENST00000513495 MRPL50Q8N5N7 158 aaKnown RBP20.07■□□□□ 0.8
SH3TC1-223ENST00000513495 SLC16A10Q8TF71 515 aa20.07■□□□□ 0.8
SH3TC1-223ENST00000513495 PHAXQ9H814 394 aaKnown RBP20.07■□□□□ 0.8
SH3TC1-223ENST00000513495 C4AP0C0L4 1744 aa20.07■□□□□ 0.8
SH3TC1-223ENST00000513495 MAP3K15Q6ZN16 1313 aa20.06■□□□□ 0.8
SH3TC1-223ENST00000513495 USP42Q9H9J4 1324 aaKnown RBP20.06■□□□□ 0.8
SH3TC1-223ENST00000513495 ERVV-1B6SEH8 477 aa20.06■□□□□ 0.8
SH3TC1-223ENST00000513495 RGL2O15211 777 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms