RNA–Protein interactions for RNA: ENST00000513228.1

SMN1-208, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 2

Gene SMN1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-208ENST00000513228 RNFT1Q5M7Z0 435 aa4.68□□□□□ -1.66
SMN1-208ENST00000513228 USP17L2Q6R6M4 530 aa4.68□□□□□ -1.66
SMN1-208ENST00000513228 USP17L1Q7RTZ2 530 aa4.68□□□□□ -1.66
SMN1-208ENST00000513228 RHBDD1Q8TEB9 315 aa4.68□□□□□ -1.66
SMN1-208ENST00000513228 NANOS1Q8WY41 292 aaKnown RBP4.68□□□□□ -1.66
SMN1-208ENST00000513228 GLMNQ92990 594 aa4.68□□□□□ -1.66
SMN1-208ENST00000513228 ZNF837Q96EG3 531 aaPredicted RBP4.68□□□□□ -1.66
SMN1-208ENST00000513228 KRTAP9-8Q9BYQ0 159 aa4.68□□□□□ -1.66
SMN1-208ENST00000513228 CHMP3Q9Y3E7 222 aa4.68□□□□□ -1.66
SMN1-208ENST00000513228 TATP17735 454 aaPredicted RBP4.67□□□□□ -1.66
SMN1-208ENST00000513228 MX2P20592 715 aa4.67□□□□□ -1.66
SMN1-208ENST00000513228 ITGB7P26010 798 aa4.67□□□□□ -1.66
SMN1-208ENST00000513228 MSX1P28360 303 aa4.67□□□□□ -1.66
SMN1-208ENST00000513228 DBN1Q16643 649 aa4.67□□□□□ -1.66
SMN1-208ENST00000513228 WDR44Q5JSH3 913 aa4.67□□□□□ -1.66
SMN1-208ENST00000513228 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.67□□□□□ -1.66
SMN1-208ENST00000513228 NFATC2IPQ8NCF5 419 aa4.67□□□□□ -1.66
SMN1-208ENST00000513228 TPCN2Q8NHX9 752 aa4.67□□□□□ -1.66
SMN1-208ENST00000513228 GMCL1Q96IK5 515 aa4.67□□□□□ -1.66
SMN1-208ENST00000513228 ZNF594Q96JF6 807 aaPredicted RBP4.67□□□□□ -1.66
SMN1-208ENST00000513228 MKRN1Q9UHC7 482 aaKnown RBP4.67□□□□□ -1.66
SMN1-208ENST00000513228 ZNF777Q9ULD5 760 aaPredicted RBP4.67□□□□□ -1.66
SMN1-208ENST00000513228 PHF24Q9UPV7 400 aa4.67□□□□□ -1.66
SMN1-208ENST00000513228 PARP3Q9Y6F1 533 aa4.67□□□□□ -1.66
SMN1-208ENST00000513228 CNTNAP5Q8WYK1 1306 aa4.67□□□□□ -1.66
SMN1-208ENST00000513228 ATP9BO43861 1147 aa4.66□□□□□ -1.66
SMN1-208ENST00000513228 ADAMTS2O95450 1211 aa4.66□□□□□ -1.66
SMN1-208ENST00000513228 SCNN1DP51172 638 aa4.66□□□□□ -1.66
SMN1-208ENST00000513228 TBCELQ5QJ74 424 aa4.66□□□□□ -1.66
SMN1-208ENST00000513228 CCDC102BQ68D86 513 aa4.66□□□□□ -1.66
SMN1-208ENST00000513228 PPARGC1BQ86YN6 1023 aaKnown RBP4.66□□□□□ -1.66
SMN1-208ENST00000513228 NEDD1Q8NHV4 660 aa4.66□□□□□ -1.66
SMN1-208ENST00000513228 ENAMQ9NRM1 1142 aa4.66□□□□□ -1.66
SMN1-208ENST00000513228 DNAAF2Q9NVR5 837 aaKnown RBP4.66□□□□□ -1.66
SMN1-208ENST00000513228 TFIP11Q9UBB9 837 aaKnown RBP4.66□□□□□ -1.66
SMN1-208ENST00000513228 A6NJY4 79 aa4.65□□□□□ -1.67
SMN1-208ENST00000513228 RASA1P20936 1047 aa4.65□□□□□ -1.67
SMN1-208ENST00000513228 LMOD1P29536 600 aaPredicted RBP4.65□□□□□ -1.67
SMN1-208ENST00000513228 LARP1Q6PKG0 1096 aaKnown RBP4.65□□□□□ -1.67
SMN1-208ENST00000513228 TNS4Q8IZW8 715 aa4.65□□□□□ -1.67
SMN1-208ENST00000513228 OGFOD1Q8N543 542 aa4.65□□□□□ -1.67
SMN1-208ENST00000513228 ADAMTS19Q8TE59 1207 aa4.65□□□□□ -1.67
SMN1-208ENST00000513228 CHMP7Q8WUX9 453 aaPredicted RBP4.65□□□□□ -1.67
SMN1-208ENST00000513228 HINFPQ9BQA5 517 aa4.65□□□□□ -1.67
SMN1-208ENST00000513228 FHDC1Q9C0D6 1143 aaPredicted RBP4.65□□□□□ -1.67
SMN1-208ENST00000513228 MBIPQ9NS73 344 aa4.65□□□□□ -1.67
SMN1-208ENST00000513228 CHIC2Q9UKJ5 165 aa4.65□□□□□ -1.67
SMN1-208ENST00000513228 SCO2A0A1W2PP80 73 aa4.64□□□□□ -1.67
SMN1-208ENST00000513228 PALM3A6NDB9 673 aaPredicted RBP4.64□□□□□ -1.67
SMN1-208ENST00000513228 TMEM229AB2RXF0 380 aa4.64□□□□□ -1.67
SMN1-208ENST00000513228 BMP4P12644 408 aa4.64□□□□□ -1.67
SMN1-208ENST00000513228 YBX3P16989 372 aaKnown RBP eCLIP4.64□□□□□ -1.67
SMN1-208ENST00000513228 RFX1P22670 979 aa4.64□□□□□ -1.67
SMN1-208ENST00000513228 SRSF11Q05519 484 aaKnown RBP4.64□□□□□ -1.67
SMN1-208ENST00000513228 LYPD4Q6UWN0 246 aa4.64□□□□□ -1.67
SMN1-208ENST00000513228 BEND7Q8N7W2 519 aaPredicted RBP4.64□□□□□ -1.67
SMN1-208ENST00000513228 ZNF358Q9NW07 568 aa4.64□□□□□ -1.67
SMN1-208ENST00000513228 PCDHGA11Q9Y5H2 935 aa4.64□□□□□ -1.67
SMN1-208ENST00000513228 IGF1RP08069 1367 aa4.64□□□□□ -1.67
SMN1-208ENST00000513228 CDK2AP1O14519 115 aa4.63□□□□□ -1.67
SMN1-208ENST00000513228 KHNYNO15037 678 aaKnown RBP4.63□□□□□ -1.67
SMN1-208ENST00000513228 AMPD1P23109 780 aa4.63□□□□□ -1.67
SMN1-208ENST00000513228 FIGNL1Q6PIW4 674 aa4.63□□□□□ -1.67
SMN1-208ENST00000513228 PODNQ7Z5L7 613 aa4.63□□□□□ -1.67
SMN1-208ENST00000513228 SLC9A9Q8IVB4 645 aa4.63□□□□□ -1.67
SMN1-208ENST00000513228 ABHD17AQ96GS6 310 aa4.63□□□□□ -1.67
SMN1-208ENST00000513228 RRAGCQ9HB90 399 aa4.63□□□□□ -1.67
SMN1-208ENST00000513228 HRH3Q9Y5N1 445 aa4.63□□□□□ -1.67
SMN1-208ENST00000513228 A0A1W2PNR3 127 aa4.62□□□□□ -1.67
SMN1-208ENST00000513228 SERTM1A2A2V5 107 aa4.62□□□□□ -1.67
SMN1-208ENST00000513228 DCDC2BA2VCK2 349 aa4.62□□□□□ -1.67
SMN1-208ENST00000513228 A6NJR5 290 aa4.62□□□□□ -1.67
SMN1-208ENST00000513228 SFI1A8K8P3 1242 aa4.62□□□□□ -1.67
SMN1-208ENST00000513228 ATXN7O15265 892 aaPredicted RBP4.62□□□□□ -1.67
SMN1-208ENST00000513228 LGR5O75473 907 aa4.62□□□□□ -1.67
SMN1-208ENST00000513228 GAS6Q14393 721 aa4.62□□□□□ -1.67
SMN1-208ENST00000513228 CDCA8Q53HL2 280 aa4.62□□□□□ -1.67
SMN1-208ENST00000513228 PLEKHM2Q8IWE5 1019 aa4.62□□□□□ -1.67
SMN1-208ENST00000513228 NGLY1Q96IV0 654 aa4.62□□□□□ -1.67
SMN1-208ENST00000513228 UCN2Q96RP3 112 aa4.62□□□□□ -1.67
SMN1-208ENST00000513228 PRR12Q9ULL5 1215 aa4.62□□□□□ -1.67
SMN1-208ENST00000513228 PPP1R12BO60237 982 aaPredicted RBP4.61□□□□□ -1.67
SMN1-208ENST00000513228 FGFR3P22607 806 aa4.61□□□□□ -1.67
SMN1-208ENST00000513228 MAP2K3P46734 347 aa4.61□□□□□ -1.67
SMN1-208ENST00000513228 CLDN10P78369 228 aa4.61□□□□□ -1.67
SMN1-208ENST00000513228 LBRQ14739 615 aaKnown RBP4.61□□□□□ -1.67
SMN1-208ENST00000513228 LARGE2Q8N3Y3 721 aa4.61□□□□□ -1.67
SMN1-208ENST00000513228 TSEN2Q8NCE0 465 aaKnown RBP4.61□□□□□ -1.67
SMN1-208ENST00000513228 C1orf216Q8TAB5 229 aa4.61□□□□□ -1.67
SMN1-208ENST00000513228 RHPN1Q8TCX5 695 aa4.61□□□□□ -1.67
SMN1-208ENST00000513228 L3MBTL2Q969R5 705 aa4.61□□□□□ -1.67
SMN1-208ENST00000513228 VTI1AQ96AJ9 217 aa4.61□□□□□ -1.67
SMN1-208ENST00000513228 SLC4A9Q96Q91 983 aa4.61□□□□□ -1.67
SMN1-208ENST00000513228 PPP1R12CQ9BZL4 782 aa4.61□□□□□ -1.67
SMN1-208ENST00000513228 VRTNQ9H8Y1 702 aa4.61□□□□□ -1.67
SMN1-208ENST00000513228 SCHIP1Q9P0W5 487 aaPredicted RBP4.61□□□□□ -1.67
SMN1-208ENST00000513228 HCN4Q9Y3Q4 1203 aa4.61□□□□□ -1.67
SMN1-208ENST00000513228 MAFBQ9Y5Q3 323 aaPredicted RBP4.61□□□□□ -1.67
SMN1-208ENST00000513228 KRBA1A5PL33 1030 aa4.6□□□□□ -1.67
SMN1-208ENST00000513228 CELA2BP08218 269 aaPredicted RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms