RNA–Protein interactions for RNA: ENST00000513159.5

PTPN20-227, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 450 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-227ENST00000513159 PDGFDQ9GZP0 370 aaPredicted RBP13.49□□□□□ -0.25
PTPN20-227ENST00000513159 CNTNAP4Q9C0A0 1308 aa13.48□□□□□ -0.25
PTPN20-227ENST00000513159 SNRPA1P09661 255 aaKnown RBP13.48□□□□□ -0.25
PTPN20-227ENST00000513159 CALD1Q05682 793 aaKnown RBP13.48□□□□□ -0.25
PTPN20-227ENST00000513159 SLFN5Q08AF3 891 aa13.48□□□□□ -0.25
PTPN20-227ENST00000513159 SLC15A2Q16348 729 aa13.48□□□□□ -0.25
PTPN20-227ENST00000513159 A1BGP04217 495 aa13.47□□□□□ -0.25
PTPN20-227ENST00000513159 CRKLP46109 303 aaKnown RBP13.47□□□□□ -0.25
PTPN20-227ENST00000513159 RC3H1Q5TC82 1133 aaKnown RBP13.47□□□□□ -0.25
PTPN20-227ENST00000513159 ZBTB1Q9Y2K1 713 aa13.47□□□□□ -0.25
PTPN20-227ENST00000513159 CACNA1FO60840 1977 aa13.47□□□□□ -0.25
PTPN20-227ENST00000513159 PNPLA7Q6ZV29 1317 aa13.46□□□□□ -0.25
PTPN20-227ENST00000513159 NBPF26B4DH59 902 aa13.46□□□□□ -0.25
PTPN20-227ENST00000513159 PIP4K2AP48426 406 aaPredicted RBP13.46□□□□□ -0.25
PTPN20-227ENST00000513159 GOLGA2Q08379 1002 aa13.46□□□□□ -0.25
PTPN20-227ENST00000513159 NBPF14Q5TI25 921 aa13.46□□□□□ -0.25
PTPN20-227ENST00000513159 NBPF10Q6P3W6 841 aaKnown RBP13.46□□□□□ -0.25
PTPN20-227ENST00000513159 NBPF15Q8N660 670 aa13.46□□□□□ -0.25
PTPN20-227ENST00000513159 ZBED9Q6R2W3 1325 aa13.45□□□□□ -0.26
PTPN20-227ENST00000513159 COL24A1Q17RW2 1714 aa13.45□□□□□ -0.26
PTPN20-227ENST00000513159 ELL2O00472 640 aaPredicted RBP13.45□□□□□ -0.26
PTPN20-227ENST00000513159 PDIA6Q15084 440 aa13.45□□□□□ -0.26
PTPN20-227ENST00000513159 DUSP27Q5VZP5 1158 aa13.45□□□□□ -0.26
PTPN20-227ENST00000513159 LRP10Q7Z4F1 713 aa13.45□□□□□ -0.26
PTPN20-227ENST00000513159 CCDC87Q9NVE4 849 aa13.45□□□□□ -0.26
PTPN20-227ENST00000513159 PSDA5PKW4 1024 aaPredicted RBP13.44□□□□□ -0.26
PTPN20-227ENST00000513159 RPS6KA4O75676 772 aa13.44□□□□□ -0.26
PTPN20-227ENST00000513159 EXOSC9Q06265 439 aaKnown RBP13.44□□□□□ -0.26
PTPN20-227ENST00000513159 R3HDM1Q15032 1099 aaKnown RBP13.44□□□□□ -0.26
PTPN20-227ENST00000513159 TEX13AQ9BXU3 409 aaPredicted RBP13.44□□□□□ -0.26
PTPN20-227ENST00000513159 STK32BQ9NY57 414 aa13.44□□□□□ -0.26
PTPN20-227ENST00000513159 SOS1Q07889 1333 aaPredicted RBP13.43□□□□□ -0.26
PTPN20-227ENST00000513159 GNPATO15228 680 aa13.43□□□□□ -0.26
PTPN20-227ENST00000513159 EIF5P55010 431 aaKnown RBP13.43□□□□□ -0.26
PTPN20-227ENST00000513159 PROSER3Q2NL68 480 aa13.43□□□□□ -0.26
PTPN20-227ENST00000513159 COL23A1Q86Y22 540 aaPredicted RBP13.43□□□□□ -0.26
PTPN20-227ENST00000513159 NUP98P52948 1817 aa13.42□□□□□ -0.26
PTPN20-227ENST00000513159 E9PSI1 815 aa13.42□□□□□ -0.26
PTPN20-227ENST00000513159 VAMP4O75379 141 aa13.42□□□□□ -0.26
PTPN20-227ENST00000513159 ANXA1P04083 346 aa13.42□□□□□ -0.26
PTPN20-227ENST00000513159 HOXB7P09629 217 aa13.42□□□□□ -0.26
PTPN20-227ENST00000513159 EIF2S2P20042 333 aaKnown RBP13.42□□□□□ -0.26
PTPN20-227ENST00000513159 CANXP27824 592 aaKnown RBP13.42□□□□□ -0.26
PTPN20-227ENST00000513159 AK7Q96M32 723 aa13.42□□□□□ -0.26
PTPN20-227ENST00000513159 TFCP2L1Q9NZI6 479 aa13.42□□□□□ -0.26
PTPN20-227ENST00000513159 BCORQ6W2J9 1755 aa13.42□□□□□ -0.26
PTPN20-227ENST00000513159 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.41□□□□□ -0.26
PTPN20-227ENST00000513159 STARD3NLO95772 234 aa13.41□□□□□ -0.26
PTPN20-227ENST00000513159 NECTIN2Q92692 538 aa13.41□□□□□ -0.26
PTPN20-227ENST00000513159 MYH16Q9H6N6 1097 aa13.41□□□□□ -0.26
PTPN20-227ENST00000513159 SSFA2P28290 1259 aa13.4□□□□□ -0.26
PTPN20-227ENST00000513159 TWISTNBQ3B726 338 aaPredicted RBP13.4□□□□□ -0.26
PTPN20-227ENST00000513159 ARHGEF1Q92888 912 aaKnown RBP13.4□□□□□ -0.26
PTPN20-227ENST00000513159 SCN7AQ01118 1682 aa13.4□□□□□ -0.26
PTPN20-227ENST00000513159 PHF14O94880 888 aa13.39□□□□□ -0.27
PTPN20-227ENST00000513159 IL6STP40189 918 aaPredicted RBP13.39□□□□□ -0.27
PTPN20-227ENST00000513159 BCL2L12Q9HB09 334 aa13.39□□□□□ -0.27
PTPN20-227ENST00000513159 CHPF2Q9P2E5 772 aa13.39□□□□□ -0.27
PTPN20-227ENST00000513159 SRP68Q9UHB9 627 aaKnown RBP13.39□□□□□ -0.27
PTPN20-227ENST00000513159 RTCBQ9Y3I0 505 aaKnown RBP13.39□□□□□ -0.27
PTPN20-227ENST00000513159 COL15A1P39059 1388 aa13.39□□□□□ -0.27
PTPN20-227ENST00000513159 TCERG1O14776 1098 aaKnown RBP13.38□□□□□ -0.27
PTPN20-227ENST00000513159 HDGFL1Q5TGJ6 251 aa13.38□□□□□ -0.27
PTPN20-227ENST00000513159 ERBB4Q15303 1308 aa13.38□□□□□ -0.27
PTPN20-227ENST00000513159 MYL6BP14649 208 aa13.37□□□□□ -0.27
PTPN20-227ENST00000513159 TRAPPC3LQ5T215 181 aa13.37□□□□□ -0.27
PTPN20-227ENST00000513159 TTLL7Q6ZT98 887 aa13.37□□□□□ -0.27
PTPN20-227ENST00000513159 YTHDC1Q96MU7 727 aaKnown RBP13.37□□□□□ -0.27
PTPN20-227ENST00000513159 DDX21Q9NR30 783 aaKnown RBP eCLIP13.37□□□□□ -0.27
PTPN20-227ENST00000513159 AFDNP55196 1824 aaKnown RBP13.36□□□□□ -0.27
PTPN20-227ENST00000513159 ARFGEF2Q9Y6D5 1785 aa13.36□□□□□ -0.27
PTPN20-227ENST00000513159 ADRA2BP18089 450 aa13.36□□□□□ -0.27
PTPN20-227ENST00000513159 G2E3Q7L622 706 aa13.36□□□□□ -0.27
PTPN20-227ENST00000513159 PHAXQ9H814 394 aaKnown RBP13.36□□□□□ -0.27
PTPN20-227ENST00000513159 TBC1D2BQ9UPU7 963 aa13.36□□□□□ -0.27
PTPN20-227ENST00000513159 USP42Q9H9J4 1324 aaKnown RBP13.36□□□□□ -0.27
PTPN20-227ENST00000513159 CAMTA2O94983 1202 aa13.35□□□□□ -0.27
PTPN20-227ENST00000513159 GYS1P13807 737 aa13.35□□□□□ -0.27
PTPN20-227ENST00000513159 HMGB2P26583 209 aaKnown RBP13.35□□□□□ -0.27
PTPN20-227ENST00000513159 FLAD1Q8NFF5 587 aa13.35□□□□□ -0.27
PTPN20-227ENST00000513159 NARFQ9UHQ1 456 aa13.35□□□□□ -0.27
PTPN20-227ENST00000513159 ZNF330Q9Y3S2 320 aaPredicted RBP13.35□□□□□ -0.27
PTPN20-227ENST00000513159 ANKRD36CQ5JPF3 1778 aa13.35□□□□□ -0.27
PTPN20-227ENST00000513159 ZBTB7AO95365 584 aa13.34□□□□□ -0.27
PTPN20-227ENST00000513159 HLFQ16534 295 aa13.34□□□□□ -0.27
PTPN20-227ENST00000513159 XAGE3Q8WTP9 111 aa13.34□□□□□ -0.27
PTPN20-227ENST00000513159 SGIP1Q9BQI5 828 aa13.34□□□□□ -0.27
PTPN20-227ENST00000513159 DBF4Q9UBU7 674 aaPredicted RBP13.34□□□□□ -0.27
PTPN20-227ENST00000513159 PTGER2P43116 358 aa13.33□□□□□ -0.28
PTPN20-227ENST00000513159 FKBP8Q14318 412 aa13.33□□□□□ -0.28
PTPN20-227ENST00000513159 CCDC30Q5VVM6 783 aa13.33□□□□□ -0.28
PTPN20-227ENST00000513159 USPL1Q5W0Q7 1092 aa13.33□□□□□ -0.28
PTPN20-227ENST00000513159 MSL1Q68DK7 614 aa13.33□□□□□ -0.28
PTPN20-227ENST00000513159 COPS6Q7L5N1 327 aa13.33□□□□□ -0.28
PTPN20-227ENST00000513159 DZIP3Q86Y13 1208 aaKnown RBP13.33□□□□□ -0.28
PTPN20-227ENST00000513159 SSH1Q8WYL5 1049 aa13.33□□□□□ -0.28
PTPN20-227ENST00000513159 RFC4P35249 363 aa13.32□□□□□ -0.28
PTPN20-227ENST00000513159 MRPL50Q8N5N7 158 aaKnown RBP13.32□□□□□ -0.28
PTPN20-227ENST00000513159 SLC16A10Q8TF71 515 aa13.32□□□□□ -0.28
PTPN20-227ENST00000513159 ATF5Q9Y2D1 282 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms