RNA–Protein interactions for RNA: ENST00000513080.5

SPOP-218, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 4

Gene SPOP, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-218ENST00000513080 SOS1Q07889 1333 aaPredicted RBP19.25■□□□□ 0.67
SPOP-218ENST00000513080 GYS1P13807 737 aa19.24■□□□□ 0.67
SPOP-218ENST00000513080 CANXP27824 592 aaKnown RBP19.24■□□□□ 0.67
SPOP-218ENST00000513080 RIPK4P57078 832 aa19.24■□□□□ 0.67
SPOP-218ENST00000513080 MIS18AQ9NYP9 233 aa19.24■□□□□ 0.67
SPOP-218ENST00000513080 SRP68Q9UHB9 627 aaKnown RBP19.24■□□□□ 0.67
SPOP-218ENST00000513080 MMP10P09238 476 aa19.23■□□□□ 0.67
SPOP-218ENST00000513080 TMPOP42166 694 aaKnown RBP19.23■□□□□ 0.67
SPOP-218ENST00000513080 NLGN2Q8NFZ4 835 aa19.22■□□□□ 0.67
SPOP-218ENST00000513080 RUNDC1Q96C34 613 aa19.22■□□□□ 0.67
SPOP-218ENST00000513080 USP42Q9H9J4 1324 aaKnown RBP19.22■□□□□ 0.67
SPOP-218ENST00000513080 PNISRQ8TF01 805 aaKnown RBP19.21■□□□□ 0.67
SPOP-218ENST00000513080 RRP7AQ9Y3A4 280 aaKnown RBP19.21■□□□□ 0.67
SPOP-218ENST00000513080 CD2APQ9Y5K6 639 aa19.21■□□□□ 0.67
SPOP-218ENST00000513080 COL15A1P39059 1388 aa19.2■□□□□ 0.66
SPOP-218ENST00000513080 ZPR1O75312 459 aa19.2■□□□□ 0.66
SPOP-218ENST00000513080 SNRPA1P09661 255 aaKnown RBP19.2■□□□□ 0.66
SPOP-218ENST00000513080 FKBP8Q14318 412 aa19.2■□□□□ 0.66
SPOP-218ENST00000513080 NEUROD2Q15784 382 aa19.2■□□□□ 0.66
SPOP-218ENST00000513080 USP16Q9Y5T5 823 aa19.2■□□□□ 0.66
SPOP-218ENST00000513080 KDM3BQ7LBC6 1761 aa19.19■□□□□ 0.66
SPOP-218ENST00000513080 PRAMEF22A3QJZ6 481 aa19.19■□□□□ 0.66
SPOP-218ENST00000513080 ANP32CO43423 234 aa19.19■□□□□ 0.66
SPOP-218ENST00000513080 A1BGP04217 495 aa19.19■□□□□ 0.66
SPOP-218ENST00000513080 EIF5P55010 431 aaKnown RBP19.19■□□□□ 0.66
SPOP-218ENST00000513080 LMOD3Q0VAK6 560 aa19.19■□□□□ 0.66
SPOP-218ENST00000513080 USPL1Q5W0Q7 1092 aa19.19■□□□□ 0.66
SPOP-218ENST00000513080 CCDC184Q52MB2 194 aa19.18■□□□□ 0.66
SPOP-218ENST00000513080 NARFQ9UHQ1 456 aa19.18■□□□□ 0.66
SPOP-218ENST00000513080 GPR162Q16538 588 aa19.17■□□□□ 0.66
SPOP-218ENST00000513080 ZNF330Q9Y3S2 320 aaPredicted RBP19.17■□□□□ 0.66
SPOP-218ENST00000513080 PARP3Q9Y6F1 533 aa19.17■□□□□ 0.66
SPOP-218ENST00000513080 A0A087WZG4 1122 aa19.16■□□□□ 0.66
SPOP-218ENST00000513080 IL6STP40189 918 aaPredicted RBP19.16■□□□□ 0.66
SPOP-218ENST00000513080 PELP1Q8IZL8 1130 aaKnown RBP19.15■□□□□ 0.66
SPOP-218ENST00000513080 TM4SF1P30408 202 aa19.14■□□□□ 0.65
SPOP-218ENST00000513080 PIP4K2AP48426 406 aaPredicted RBP19.14■□□□□ 0.65
SPOP-218ENST00000513080 EIF4A1P60842 406 aaKnown RBP19.14■□□□□ 0.65
SPOP-218ENST00000513080 NPM2Q86SE8 214 aaKnown RBP19.14■□□□□ 0.65
SPOP-218ENST00000513080 BCL2L12Q9HB09 334 aa19.14■□□□□ 0.65
SPOP-218ENST00000513080 TSPYL4Q9UJ04 414 aa19.14■□□□□ 0.65
SPOP-218ENST00000513080 TRIM35Q9UPQ4 493 aa19.14■□□□□ 0.65
SPOP-218ENST00000513080 DDR1Q08345 913 aa19.13■□□□□ 0.65
SPOP-218ENST00000513080 TBC1D2BQ9UPU7 963 aa19.13■□□□□ 0.65
SPOP-218ENST00000513080 KIF13BQ9NQT8 1826 aa19.13■□□□□ 0.65
SPOP-218ENST00000513080 LAMB4A4D0S4 1761 aa19.12■□□□□ 0.65
SPOP-218ENST00000513080 GIGYF1O75420 1035 aaPredicted RBP19.12■□□□□ 0.65
SPOP-218ENST00000513080 BABAM1Q9NWV8 329 aa19.12■□□□□ 0.65
SPOP-218ENST00000513080 APAF1O14727 1248 aa19.11■□□□□ 0.65
SPOP-218ENST00000513080 NFIXQ14938 502 aa19.11■□□□□ 0.65
SPOP-218ENST00000513080 MRS2Q9HD23 443 aa19.11■□□□□ 0.65
SPOP-218ENST00000513080 C10orf71Q711Q0 1435 aa19.1■□□□□ 0.65
SPOP-218ENST00000513080 NBPF26B4DH59 902 aa19.1■□□□□ 0.65
SPOP-218ENST00000513080 POLRMTO00411 1230 aaKnown RBP19.1■□□□□ 0.65
SPOP-218ENST00000513080 NBPF10Q6P3W6 841 aaKnown RBP19.1■□□□□ 0.65
SPOP-218ENST00000513080 NBPF15Q8N660 670 aa19.1■□□□□ 0.65
SPOP-218ENST00000513080 SCN7AQ01118 1682 aa19.09■□□□□ 0.65
SPOP-218ENST00000513080 YBX3P16989 372 aaKnown RBP eCLIP19.09■□□□□ 0.652e-10■■□□□ 12.8
SPOP-218ENST00000513080 TGFB2P61812 414 aa19.09■□□□□ 0.65
SPOP-218ENST00000513080 DZIP3Q86Y13 1208 aaKnown RBP19.09■□□□□ 0.65
SPOP-218ENST00000513080 LAS1LQ9Y4W2 734 aaKnown RBP19.09■□□□□ 0.65
SPOP-218ENST00000513080 N4BP2Q86UW6 1770 aaPredicted RBP19.09■□□□□ 0.65
SPOP-218ENST00000513080 YY1P25490 414 aa19.08■□□□□ 0.64
SPOP-218ENST00000513080 BICDL1Q6ZP65 573 aa19.08■□□□□ 0.64
SPOP-218ENST00000513080 WWC3Q9ULE0 1092 aa19.08■□□□□ 0.64
SPOP-218ENST00000513080 AFDNP55196 1824 aaKnown RBP19.08■□□□□ 0.64
SPOP-218ENST00000513080 KIAA1551Q9HCM1 1747 aa19.08■□□□□ 0.64
SPOP-218ENST00000513080 CHL1O00533 1208 aa19.07■□□□□ 0.64
SPOP-218ENST00000513080 CAMTA2O94983 1202 aa19.07■□□□□ 0.64
SPOP-218ENST00000513080 TBC1D9BQ66K14 1250 aa19.07■□□□□ 0.64
SPOP-218ENST00000513080 PXDNLA1KZ92 1463 aa19.07■□□□□ 0.64
SPOP-218ENST00000513080 BCORQ6W2J9 1755 aa19.06■□□□□ 0.64
SPOP-218ENST00000513080 CHD4Q14839 1912 aa19.06■□□□□ 0.64
SPOP-218ENST00000513080 A0A0G2JLW4 131 aa19.06■□□□□ 0.64
SPOP-218ENST00000513080 GRIN3BO60391 1043 aa19.06■□□□□ 0.64
SPOP-218ENST00000513080 SERPINB2P05120 415 aa19.06■□□□□ 0.64
SPOP-218ENST00000513080 NRXN2Q9P2S2 1712 aa19.05■□□□□ 0.64
SPOP-218ENST00000513080 DPEP1P16444 411 aa19.04■□□□□ 0.64
SPOP-218ENST00000513080 NGEFQ8N5V2 710 aa19.04■□□□□ 0.64
SPOP-218ENST00000513080 MYL6BP14649 208 aa19.03■□□□□ 0.64
SPOP-218ENST00000513080 EIF2S2P20042 333 aaKnown RBP19.03■□□□□ 0.64
SPOP-218ENST00000513080 CFAP44Q96MT7 982 aa19.03■□□□□ 0.64
SPOP-218ENST00000513080 CLEC4GQ6UXB4 293 aa19.02■□□□□ 0.64
SPOP-218ENST00000513080 SETDB2Q96T68 719 aa19.02■□□□□ 0.64
SPOP-218ENST00000513080 ZNF652Q9Y2D9 606 aa19.02■□□□□ 0.64
SPOP-218ENST00000513080 ERBB4Q15303 1308 aa19.01■□□□□ 0.63
SPOP-218ENST00000513080 SENP3-EIF4A1A0A087X0R7 540 aa19.01■□□□□ 0.63
SPOP-218ENST00000513080 CALD1Q05682 793 aaKnown RBP19.01■□□□□ 0.63
SPOP-218ENST00000513080 KRT24Q2M2I5 525 aa19.01■□□□□ 0.63
SPOP-218ENST00000513080 CARMIL3Q8ND23 1372 aa19.01■□□□□ 0.63
SPOP-218ENST00000513080 BRCA1P38398 1863 aaKnown RBP19.01■□□□□ 0.63
SPOP-218ENST00000513080 UTRNP46939 3433 aa19■□□□□ 0.63
SPOP-218ENST00000513080 KCNA3P22001 575 aa19■□□□□ 0.63
SPOP-218ENST00000513080 CHRNA5P30532 468 aa19■□□□□ 0.63
SPOP-218ENST00000513080 ZNF853P0CG23 659 aa18.99■□□□□ 0.63
SPOP-218ENST00000513080 HLFQ16534 295 aa18.99■□□□□ 0.63
SPOP-218ENST00000513080 NECTIN2Q92692 538 aa18.99■□□□□ 0.63
SPOP-218ENST00000513080 MBIPQ9NS73 344 aa18.99■□□□□ 0.63
SPOP-218ENST00000513080 IFT57Q9NWB7 429 aa18.99■□□□□ 0.63
SPOP-218ENST00000513080 BCS1LQ9Y276 419 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms