RNA–Protein interactions for RNA: ENST00000512649.1

SERF1A-207, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 2 BASIC

Gene SERF1A, Length 846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-207ENST00000512649 KCNQ3O43525 872 aa21.82■■□□□ 1.08
SERF1A-207ENST00000512649 WDR43Q15061 677 aaKnown RBP eCLIP21.82■■□□□ 1.08
SERF1A-207ENST00000512649 USP42Q9H9J4 1324 aaKnown RBP21.81■■□□□ 1.08
SERF1A-207ENST00000512649 PRKRIP1Q9H875 184 aaPredicted RBP21.81■■□□□ 1.08
SERF1A-207ENST00000512649 CICQ96RK0 1608 aaPredicted RBP21.8■■□□□ 1.08
SERF1A-207ENST00000512649 A0A087WZG4 1122 aa21.8■■□□□ 1.08
SERF1A-207ENST00000512649 USPL1Q5W0Q7 1092 aa21.8■■□□□ 1.08
SERF1A-207ENST00000512649 GRIN3BO60391 1043 aa21.79■■□□□ 1.08
SERF1A-207ENST00000512649 FKBP8Q14318 412 aa21.79■■□□□ 1.08
SERF1A-207ENST00000512649 PNISRQ8TF01 805 aaKnown RBP21.79■■□□□ 1.08
SERF1A-207ENST00000512649 ZNF330Q9Y3S2 320 aaPredicted RBP21.79■■□□□ 1.08
SERF1A-207ENST00000512649 UTRNP46939 3433 aa21.78■■□□□ 1.08
SERF1A-207ENST00000512649 COL15A1P39059 1388 aa21.78■■□□□ 1.08
SERF1A-207ENST00000512649 SNRPA1P09661 255 aaKnown RBP21.78■■□□□ 1.08
SERF1A-207ENST00000512649 NARFQ9UHQ1 456 aa21.78■■□□□ 1.08
SERF1A-207ENST00000512649 SIPA1L3O60292 1781 aaPredicted RBP21.78■■□□□ 1.08
SERF1A-207ENST00000512649 UBR2Q8IWV8 1755 aa21.78■■□□□ 1.08
SERF1A-207ENST00000512649 ZNF316A6NFI3 1004 aaPredicted RBP21.77■■□□□ 1.08
SERF1A-207ENST00000512649 RIPK4P57078 832 aa21.77■■□□□ 1.08
SERF1A-207ENST00000512649 MIS18AQ9NYP9 233 aa21.77■■□□□ 1.08
SERF1A-207ENST00000512649 A1BGP04217 495 aa21.76■■□□□ 1.07
SERF1A-207ENST00000512649 EIF5P55010 431 aaKnown RBP21.76■■□□□ 1.07
SERF1A-207ENST00000512649 TGFB2P61812 414 aa21.75■■□□□ 1.07
SERF1A-207ENST00000512649 CCDC146Q8IYE0 955 aa21.75■■□□□ 1.07
SERF1A-207ENST00000512649 YBX3P16989 372 aaKnown RBP eCLIP21.74■■□□□ 1.07
SERF1A-207ENST00000512649 IL6STP40189 918 aaPredicted RBP21.74■■□□□ 1.07
SERF1A-207ENST00000512649 LMOD3Q0VAK6 560 aa21.74■■□□□ 1.07
SERF1A-207ENST00000512649 THUMPD2Q9BTF0 503 aaKnown RBP21.74■■□□□ 1.07
SERF1A-207ENST00000512649 WWC3Q9ULE0 1092 aa21.74■■□□□ 1.07
SERF1A-207ENST00000512649 USP16Q9Y5T5 823 aa21.74■■□□□ 1.07
SERF1A-207ENST00000512649 C4AP0C0L4 1744 aa21.74■■□□□ 1.07
SERF1A-207ENST00000512649 GOLGB1Q14789 3259 aaKnown RBP21.74■■□□□ 1.07
SERF1A-207ENST00000512649 NEUROD2Q15784 382 aa21.73■■□□□ 1.07
SERF1A-207ENST00000512649 RUNDC1Q96C34 613 aa21.73■■□□□ 1.07
SERF1A-207ENST00000512649 TM4SF1P30408 202 aa21.72■■□□□ 1.07
SERF1A-207ENST00000512649 TMPOP42166 694 aaKnown RBP21.72■■□□□ 1.07
SERF1A-207ENST00000512649 ADAMTS8Q9UP79 889 aa21.72■■□□□ 1.07
SERF1A-207ENST00000512649 TBC1D2BQ9UPU7 963 aa21.72■■□□□ 1.07
SERF1A-207ENST00000512649 PRAMEF22A3QJZ6 481 aa21.71■■□□□ 1.07
SERF1A-207ENST00000512649 DDR1Q08345 913 aa21.71■■□□□ 1.07
SERF1A-207ENST00000512649 DLG5Q8TDM6 1919 aa21.7■■□□□ 1.07
SERF1A-207ENST00000512649 A0A0G2JLW4 131 aa21.7■■□□□ 1.06
SERF1A-207ENST00000512649 POLRMTO00411 1230 aaKnown RBP21.7■■□□□ 1.06
SERF1A-207ENST00000512649 NFIXQ14938 502 aa21.7■■□□□ 1.06
SERF1A-207ENST00000512649 RRP7AQ9Y3A4 280 aaKnown RBP21.7■■□□□ 1.06
SERF1A-207ENST00000512649 BICDL1Q6ZP65 573 aa21.69■■□□□ 1.06
SERF1A-207ENST00000512649 TSPYL4Q9UJ04 414 aa21.69■■□□□ 1.06
SERF1A-207ENST00000512649 PIP4K2AP48426 406 aaPredicted RBP21.68■■□□□ 1.06
SERF1A-207ENST00000512649 BCL2L12Q9HB09 334 aa21.68■■□□□ 1.06
SERF1A-207ENST00000512649 C10orf71Q711Q0 1435 aa21.67■■□□□ 1.06
SERF1A-207ENST00000512649 DPEP1P16444 411 aa21.67■■□□□ 1.06
SERF1A-207ENST00000512649 DZIP3Q86Y13 1208 aaKnown RBP21.67■■□□□ 1.06
SERF1A-207ENST00000512649 SERPINB2P05120 415 aa21.66■■□□□ 1.06
SERF1A-207ENST00000512649 EIF4A1P60842 406 aaKnown RBP21.66■■□□□ 1.06
SERF1A-207ENST00000512649 BCS1LQ9Y276 419 aa21.66■■□□□ 1.06
SERF1A-207ENST00000512649 CHD4Q14839 1912 aa21.66■■□□□ 1.06
SERF1A-207ENST00000512649 ANP32CO43423 234 aa21.65■■□□□ 1.06
SERF1A-207ENST00000512649 GIGYF1O75420 1035 aaPredicted RBP21.65■■□□□ 1.06
SERF1A-207ENST00000512649 PXDNLA1KZ92 1463 aa21.64■■□□□ 1.06
SERF1A-207ENST00000512649 TBC1D9BQ66K14 1250 aa21.64■■□□□ 1.05
SERF1A-207ENST00000512649 SETDB2Q96T68 719 aa21.64■■□□□ 1.05
SERF1A-207ENST00000512649 BABAM1Q9NWV8 329 aa21.64■■□□□ 1.05
SERF1A-207ENST00000512649 NPHP1O15259 732 aa21.63■■□□□ 1.05
SERF1A-207ENST00000512649 PIM2Q9P1W9 311 aa21.63■■□□□ 1.05
SERF1A-207ENST00000512649 ZNF652Q9Y2D9 606 aa21.63■■□□□ 1.05
SERF1A-207ENST00000512649 LAS1LQ9Y4W2 734 aaKnown RBP21.63■■□□□ 1.05
SERF1A-207ENST00000512649 CAMTA2O94983 1202 aa21.62■■□□□ 1.05
SERF1A-207ENST00000512649 NBPF26B4DH59 902 aa21.61■■□□□ 1.05
SERF1A-207ENST00000512649 NBPF10Q6P3W6 841 aaKnown RBP21.61■■□□□ 1.05
SERF1A-207ENST00000512649 NGEFQ8N5V2 710 aa21.61■■□□□ 1.05
SERF1A-207ENST00000512649 NBPF15Q8N660 670 aa21.61■■□□□ 1.05
SERF1A-207ENST00000512649 ZNF784Q8NCA9 323 aaPredicted RBP21.61■■□□□ 1.05
SERF1A-207ENST00000512649 KIF13BQ9NQT8 1826 aa21.61■■□□□ 1.05
SERF1A-207ENST00000512649 CHRNA5P30532 468 aa21.6■■□□□ 1.05
SERF1A-207ENST00000512649 N4BP2Q86UW6 1770 aaPredicted RBP21.6■■□□□ 1.05
SERF1A-207ENST00000512649 KCNA3P22001 575 aa21.59■■□□□ 1.05
SERF1A-207ENST00000512649 DALRD3Q5D0E6 543 aaKnown RBP21.59■■□□□ 1.05
SERF1A-207ENST00000512649 CLEC4GQ6UXB4 293 aa21.59■■□□□ 1.05
SERF1A-207ENST00000512649 TRIM35Q9UPQ4 493 aa21.59■■□□□ 1.05
SERF1A-207ENST00000512649 APAF1O14727 1248 aa21.58■■□□□ 1.05
SERF1A-207ENST00000512649 EIF2S2P20042 333 aaKnown RBP21.58■■□□□ 1.05
SERF1A-207ENST00000512649 ARHGAP27Q6ZUM4 889 aa21.58■■□□□ 1.05
SERF1A-207ENST00000512649 KDM3BQ7LBC6 1761 aa21.58■■□□□ 1.04
SERF1A-207ENST00000512649 CARMIL3Q8ND23 1372 aa21.58■■□□□ 1.04
SERF1A-207ENST00000512649 H0YIN7 160 aa21.57■■□□□ 1.04
SERF1A-207ENST00000512649 MYL6BP14649 208 aa21.57■■□□□ 1.04
SERF1A-207ENST00000512649 ST5P78524 1137 aa21.56■■□□□ 1.04
SERF1A-207ENST00000512649 KIF6Q6ZMV9 814 aa21.56■■□□□ 1.04
SERF1A-207ENST00000512649 C2CD5Q86YS7 1000 aa21.56■■□□□ 1.04
SERF1A-207ENST00000512649 CHL1O00533 1208 aa21.55■■□□□ 1.04
SERF1A-207ENST00000512649 PDE6BP35913 854 aa21.55■■□□□ 1.04
SERF1A-207ENST00000512649 CNBD1Q8NA66 436 aa21.55■■□□□ 1.04
SERF1A-207ENST00000512649 BRIP1Q9BX63 1249 aa21.55■■□□□ 1.04
SERF1A-207ENST00000512649 CALD1Q05682 793 aaKnown RBP21.54■■□□□ 1.04
SERF1A-207ENST00000512649 CCDC184Q52MB2 194 aa21.54■■□□□ 1.04
SERF1A-207ENST00000512649 PRR5LQ6MZQ0 368 aa21.54■■□□□ 1.04
SERF1A-207ENST00000512649 NBPF5PQ86XG9 351 aaPredicted RBP21.54■■□□□ 1.04
SERF1A-207ENST00000512649 CCDC24Q8N4L8 307 aa21.54■■□□□ 1.04
SERF1A-207ENST00000512649 MRS2Q9HD23 443 aa21.54■■□□□ 1.04
SERF1A-207ENST00000512649 PDZRN3Q9UPQ7 1066 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms