RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 TTC21AQ8NDW8 1320 aa2.37□□□□□ -2.03
TRAPPC13-211ENST00000512009 LRRC59Q96AG4 307 aaKnown RBP2.37□□□□□ -2.03
TRAPPC13-211ENST00000512009 ZNF318Q5VUA4 2279 aa2.36□□□□□ -2.03
TRAPPC13-211ENST00000512009 CEBPAP49715 358 aaPredicted RBP2.36□□□□□ -2.03
TRAPPC13-211ENST00000512009 UBE2Q1Q7Z7E8 422 aa2.36□□□□□ -2.03
TRAPPC13-211ENST00000512009 ZNF710Q8N1W2 664 aa2.36□□□□□ -2.03
TRAPPC13-211ENST00000512009 HIRIP3Q9BW71 556 aaPredicted RBP2.36□□□□□ -2.03
TRAPPC13-211ENST00000512009 IGSF1Q8N6C5 1336 aa2.36□□□□□ -2.03
TRAPPC13-211ENST00000512009 IRS2Q9Y4H2 1338 aa2.36□□□□□ -2.03
TRAPPC13-211ENST00000512009 PTPRSQ13332 1948 aa2.36□□□□□ -2.03
TRAPPC13-211ENST00000512009 NAV1Q8NEY1 1877 aa2.36□□□□□ -2.03
TRAPPC13-211ENST00000512009 LYSTQ99698 3801 aa2.36□□□□□ -2.03
TRAPPC13-211ENST00000512009 MYH8P13535 1937 aa2.36□□□□□ -2.03
TRAPPC13-211ENST00000512009 ERICH6Q7L0X2 663 aa2.36□□□□□ -2.03
TRAPPC13-211ENST00000512009 SHISA4Q96DD7 197 aa2.36□□□□□ -2.03
TRAPPC13-211ENST00000512009 ANK3Q12955 4377 aaKnown RBP2.36□□□□□ -2.03
TRAPPC13-211ENST00000512009 PASKQ96RG2 1323 aa2.36□□□□□ -2.03
TRAPPC13-211ENST00000512009 ZBTB48P10074 688 aaPredicted RBP2.36□□□□□ -2.03
TRAPPC13-211ENST00000512009 CCDC27Q2M243 656 aa2.36□□□□□ -2.03
TRAPPC13-211ENST00000512009 ARHGEF25Q86VW2 580 aa2.35□□□□□ -2.03
TRAPPC13-211ENST00000512009 KCNB2Q92953 911 aa2.35□□□□□ -2.03
TRAPPC13-211ENST00000512009 KIAA1549LQ6ZVL6 1849 aa2.35□□□□□ -2.03
TRAPPC13-211ENST00000512009 PLXNA4Q9HCM2 1894 aa2.35□□□□□ -2.03
TRAPPC13-211ENST00000512009 PLEKHG5O94827 1062 aa2.35□□□□□ -2.03
TRAPPC13-211ENST00000512009 SLFN5Q08AF3 891 aa2.35□□□□□ -2.03
TRAPPC13-211ENST00000512009 GJD4Q96KN9 370 aaPredicted RBP2.35□□□□□ -2.03
TRAPPC13-211ENST00000512009 ATG3Q9NT62 314 aa2.35□□□□□ -2.03
TRAPPC13-211ENST00000512009 KAZALD1Q96I82 304 aa2.35□□□□□ -2.03
TRAPPC13-211ENST00000512009 CFDP1Q9UEE9 299 aaPredicted RBP2.35□□□□□ -2.03
TRAPPC13-211ENST00000512009 SALL2Q9Y467 1007 aaPredicted RBP2.35□□□□□ -2.03
TRAPPC13-211ENST00000512009 NECTIN2Q92692 538 aa2.35□□□□□ -2.03
TRAPPC13-211ENST00000512009 CDCA7Q9BWT1 371 aaPredicted RBP2.35□□□□□ -2.03
TRAPPC13-211ENST00000512009 PLXND1Q9Y4D7 1925 aa2.34□□□□□ -2.03
TRAPPC13-211ENST00000512009 RFX7Q2KHR2 1363 aa2.34□□□□□ -2.03
TRAPPC13-211ENST00000512009 CARMIL3Q8ND23 1372 aa2.34□□□□□ -2.03
TRAPPC13-211ENST00000512009 UNC5CLQ8IV45 518 aa2.34□□□□□ -2.03
TRAPPC13-211ENST00000512009 C7orf43Q8WVR3 580 aa2.34□□□□□ -2.03
TRAPPC13-211ENST00000512009 ARXQ96QS3 562 aa2.34□□□□□ -2.03
TRAPPC13-211ENST00000512009 USP35Q9P2H5 1018 aa2.34□□□□□ -2.03
TRAPPC13-211ENST00000512009 WDR17Q8IZU2 1322 aa2.34□□□□□ -2.04
TRAPPC13-211ENST00000512009 L3MBTL3Q96JM7 780 aaPredicted RBP2.34□□□□□ -2.04
TRAPPC13-211ENST00000512009 TRPC5Q9UL62 973 aaPredicted RBP2.34□□□□□ -2.04
TRAPPC13-211ENST00000512009 ABCC4O15439 1325 aa2.34□□□□□ -2.04
TRAPPC13-211ENST00000512009 BHMG1C9JSJ3 638 aaPredicted RBP2.34□□□□□ -2.04
TRAPPC13-211ENST00000512009 SENP3Q9H4L4 574 aaPredicted RBP2.34□□□□□ -2.04
TRAPPC13-211ENST00000512009 CNTNAP1P78357 1384 aa2.33□□□□□ -2.04
TRAPPC13-211ENST00000512009 MED15Q96RN5 788 aa2.33□□□□□ -2.04
TRAPPC13-211ENST00000512009 ROBO3Q96MS0 1386 aa2.33□□□□□ -2.04
TRAPPC13-211ENST00000512009 ANK2Q01484 3957 aa2.33□□□□□ -2.04
TRAPPC13-211ENST00000512009 MYPNQ86TC9 1320 aa2.33□□□□□ -2.04
TRAPPC13-211ENST00000512009 INHBEP58166 350 aa2.33□□□□□ -2.04
TRAPPC13-211ENST00000512009 IL16Q14005 1332 aa2.33□□□□□ -2.04
TRAPPC13-211ENST00000512009 SMC5Q8IY18 1101 aa2.33□□□□□ -2.04
TRAPPC13-211ENST00000512009 BAZ2AQ9UIF9 1905 aaKnown RBP2.33□□□□□ -2.04
TRAPPC13-211ENST00000512009 SLC4A2P04920 1241 aa2.33□□□□□ -2.04
TRAPPC13-211ENST00000512009 ZSWIM8A7E2V4 1837 aa2.33□□□□□ -2.04
TRAPPC13-211ENST00000512009 RAD50Q92878 1312 aa2.32□□□□□ -2.04
TRAPPC13-211ENST00000512009 UNCXA6NJT0 531 aa2.32□□□□□ -2.04
TRAPPC13-211ENST00000512009 NSFL1CQ9UNZ2 370 aaKnown RBP2.32□□□□□ -2.04
TRAPPC13-211ENST00000512009 RTL9Q8NET4 1388 aa2.32□□□□□ -2.04
TRAPPC13-211ENST00000512009 CENPJQ9HC77 1338 aaPredicted RBP2.32□□□□□ -2.04
TRAPPC13-211ENST00000512009 KIF3CO14782 793 aa2.32□□□□□ -2.04
TRAPPC13-211ENST00000512009 RALGAPA2Q2PPJ7 1873 aa2.32□□□□□ -2.04
TRAPPC13-211ENST00000512009 GPR153Q6NV75 609 aa2.32□□□□□ -2.04
TRAPPC13-211ENST00000512009 CARD10Q9BWT7 1032 aa2.32□□□□□ -2.04
TRAPPC13-211ENST00000512009 NID2Q14112 1375 aa2.32□□□□□ -2.04
TRAPPC13-211ENST00000512009 PLXNA3P51805 1871 aa2.32□□□□□ -2.04
TRAPPC13-211ENST00000512009 ST20-MTHFSA0A0A6YYL1 179 aa2.32□□□□□ -2.04
TRAPPC13-211ENST00000512009 RBM25P49756 843 aaKnown RBP2.32□□□□□ -2.04
TRAPPC13-211ENST00000512009 AFF2P51816 1311 aa2.32□□□□□ -2.04
TRAPPC13-211ENST00000512009 CDHR2Q9BYE9 1310 aa2.32□□□□□ -2.04
TRAPPC13-211ENST00000512009 POTECB2RU33 542 aa2.32□□□□□ -2.04
TRAPPC13-211ENST00000512009 GSPT1P15170 499 aaKnown RBP2.32□□□□□ -2.04
TRAPPC13-211ENST00000512009 PRAM1Q96QH2 718 aa2.32□□□□□ -2.04
TRAPPC13-211ENST00000512009 SAGE1Q9NXZ1 904 aa2.32□□□□□ -2.04
TRAPPC13-211ENST00000512009 PRRC2CQ9Y520 2896 aaKnown RBP2.31□□□□□ -2.04
TRAPPC13-211ENST00000512009 C7P10643 843 aa2.31□□□□□ -2.04
TRAPPC13-211ENST00000512009 KCNA3P22001 575 aa2.31□□□□□ -2.04
TRAPPC13-211ENST00000512009 HNRNPMP52272 730 aaKnown RBP eCLIP2.31□□□□□ -2.04
TRAPPC13-211ENST00000512009 ECM1Q16610 540 aa2.31□□□□□ -2.04
TRAPPC13-211ENST00000512009 IGSF3O75054 1194 aa2.31□□□□□ -2.04
TRAPPC13-211ENST00000512009 CNTNAP4Q9C0A0 1308 aa2.31□□□□□ -2.04
TRAPPC13-211ENST00000512009 RC3H1Q5TC82 1133 aaKnown RBP2.31□□□□□ -2.04
TRAPPC13-211ENST00000512009 WDR33Q9C0J8 1336 aaKnown RBP2.31□□□□□ -2.04
TRAPPC13-211ENST00000512009 DHX30Q7L2E3 1194 aaKnown RBP eCLIP2.31□□□□□ -2.04
TRAPPC13-211ENST00000512009 DAXXQ9UER7 740 aaPredicted RBP2.31□□□□□ -2.04
TRAPPC13-211ENST00000512009 NUDCQ9Y266 331 aa2.31□□□□□ -2.04
TRAPPC13-211ENST00000512009 GBF1Q92538 1859 aa2.31□□□□□ -2.04
TRAPPC13-211ENST00000512009 EDIL3O43854 480 aa2.3□□□□□ -2.04
TRAPPC13-211ENST00000512009 ITGBL1O95965 494 aaPredicted RBP2.3□□□□□ -2.04
TRAPPC13-211ENST00000512009 ADD1P35611 737 aaKnown RBP2.3□□□□□ -2.04
TRAPPC13-211ENST00000512009 NBPF6Q5VWK0 638 aa2.3□□□□□ -2.04
TRAPPC13-211ENST00000512009 NBPF4Q96M43 638 aa2.3□□□□□ -2.04
TRAPPC13-211ENST00000512009 TBC1D32Q96NH3 1257 aa2.3□□□□□ -2.04
TRAPPC13-211ENST00000512009 ZBTB40Q9NUA8 1239 aa2.3□□□□□ -2.04
TRAPPC13-211ENST00000512009 TACC3Q9Y6A5 838 aa2.3□□□□□ -2.04
TRAPPC13-211ENST00000512009 ZSCAN20P17040 1043 aaPredicted RBP2.3□□□□□ -2.04
TRAPPC13-211ENST00000512009 LRBAP50851 2863 aa2.3□□□□□ -2.04
TRAPPC13-211ENST00000512009 AKAP13Q12802 2813 aa2.3□□□□□ -2.04
TRAPPC13-211ENST00000512009 DCAF8L1A6NGE4 600 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms