RNA–Protein interactions for RNA: ENST00000511949.5

SH3TC2-210, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 4

Gene SH3TC2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-210ENST00000511949 ZNF330Q9Y3S2 320 aaPredicted RBP16.19■□□□□ 0.18
SH3TC2-210ENST00000511949 IFT57Q9NWB7 429 aa16.18■□□□□ 0.18
SH3TC2-210ENST00000511949 KCPQ6ZWJ8 1503 aa16.18■□□□□ 0.18
SH3TC2-210ENST00000511949 DLG5Q8TDM6 1919 aa16.17■□□□□ 0.18
SH3TC2-210ENST00000511949 TAF1LQ8IZX4 1826 aa16.17■□□□□ 0.18
SH3TC2-210ENST00000511949 KCNQ3O43525 872 aa16.17■□□□□ 0.18
SH3TC2-210ENST00000511949 EIF4A1P60842 406 aaKnown RBP16.17■□□□□ 0.18
SH3TC2-210ENST00000511949 ARHGEF1Q92888 912 aaKnown RBP16.17■□□□□ 0.18
SH3TC2-210ENST00000511949 QSER1Q2KHR3 1735 aa16.16■□□□□ 0.18
SH3TC2-210ENST00000511949 CHL1O00533 1208 aa16.16■□□□□ 0.18
SH3TC2-210ENST00000511949 IL6STP40189 918 aaPredicted RBP16.16■□□□□ 0.18
SH3TC2-210ENST00000511949 INTS5Q6P9B9 1019 aaKnown RBP16.16■□□□□ 0.18
SH3TC2-210ENST00000511949 PDGFDQ9GZP0 370 aaPredicted RBP16.16■□□□□ 0.18
SH3TC2-210ENST00000511949 GIGYF1O75420 1035 aaPredicted RBP16.15■□□□□ 0.18
SH3TC2-210ENST00000511949 ZBTB1Q9Y2K1 713 aa16.15■□□□□ 0.18
SH3TC2-210ENST00000511949 SALL2Q9Y467 1007 aaPredicted RBP16.15■□□□□ 0.18
SH3TC2-210ENST00000511949 USP16Q9Y5T5 823 aa16.15■□□□□ 0.18
SH3TC2-210ENST00000511949 SIPA1L3O60292 1781 aaPredicted RBP16.15■□□□□ 0.18
SH3TC2-210ENST00000511949 MSL1Q68DK7 614 aa16.14■□□□□ 0.17
SH3TC2-210ENST00000511949 SOS1Q07889 1333 aaPredicted RBP16.14■□□□□ 0.17
SH3TC2-210ENST00000511949 COL15A1P39059 1388 aa16.13■□□□□ 0.17
SH3TC2-210ENST00000511949 EIF2S2P20042 333 aaKnown RBP16.13■□□□□ 0.17
SH3TC2-210ENST00000511949 WDR63Q8IWG1 891 aa16.13■□□□□ 0.17
SH3TC2-210ENST00000511949 WWC1Q8IX03 1113 aa16.13■□□□□ 0.17
SH3TC2-210ENST00000511949 KLHL34Q8N239 644 aa16.13■□□□□ 0.17
SH3TC2-210ENST00000511949 ZNF652Q9Y2D9 606 aa16.13■□□□□ 0.17
SH3TC2-210ENST00000511949 PARP3Q9Y6F1 533 aa16.13■□□□□ 0.17
SH3TC2-210ENST00000511949 UBR2Q8IWV8 1755 aa16.13■□□□□ 0.17
SH3TC2-210ENST00000511949 LRP5O75197 1615 aa16.12■□□□□ 0.17
SH3TC2-210ENST00000511949 CICQ96RK0 1608 aaPredicted RBP16.12■□□□□ 0.17
SH3TC2-210ENST00000511949 A1BGP04217 495 aa16.12■□□□□ 0.17
SH3TC2-210ENST00000511949 HOXB7P09629 217 aa16.12■□□□□ 0.17
SH3TC2-210ENST00000511949 NARFQ9UHQ1 456 aa16.12■□□□□ 0.17
SH3TC2-210ENST00000511949 CASZ1Q86V15 1759 aa16.12■□□□□ 0.17
SH3TC2-210ENST00000511949 IL16Q14005 1332 aa16.12■□□□□ 0.17
SH3TC2-210ENST00000511949 ERBB4Q15303 1308 aa16.12■□□□□ 0.17
SH3TC2-210ENST00000511949 COL5A3P25940 1745 aaPredicted RBP16.11■□□□□ 0.17
SH3TC2-210ENST00000511949 EIF5P55010 431 aaKnown RBP16.11■□□□□ 0.17
SH3TC2-210ENST00000511949 KIF6Q6ZMV9 814 aa16.11■□□□□ 0.17
SH3TC2-210ENST00000511949 MYH16Q9H6N6 1097 aa16.11■□□□□ 0.17
SH3TC2-210ENST00000511949 USP42Q9H9J4 1324 aaKnown RBP16.11■□□□□ 0.17
SH3TC2-210ENST00000511949 TJP1Q07157 1748 aa16.11■□□□□ 0.17
SH3TC2-210ENST00000511949 NPHP1O15259 732 aa16.1■□□□□ 0.17
SH3TC2-210ENST00000511949 PTGER2P43116 358 aa16.1■□□□□ 0.17
SH3TC2-210ENST00000511949 USPL1Q5W0Q7 1092 aa16.1■□□□□ 0.17
SH3TC2-210ENST00000511949 DZIP3Q86Y13 1208 aaKnown RBP16.1■□□□□ 0.17
SH3TC2-210ENST00000511949 MIER1Q8N108 512 aa16.1■□□□□ 0.17
SH3TC2-210ENST00000511949 MBIPQ9NS73 344 aa16.1■□□□□ 0.17
SH3TC2-210ENST00000511949 UBR3Q6ZT12 1888 aa16.1■□□□□ 0.17
SH3TC2-210ENST00000511949 GYS1P13807 737 aa16.09■□□□□ 0.17
SH3TC2-210ENST00000511949 SMIM5Q71RC9 77 aa16.09■□□□□ 0.17
SH3TC2-210ENST00000511949 PRAMEF22A3QJZ6 481 aa16.08■□□□□ 0.16
SH3TC2-210ENST00000511949 MMP10P09238 476 aa16.08■□□□□ 0.16
SH3TC2-210ENST00000511949 ZNF853P0CG23 659 aa16.08■□□□□ 0.16
SH3TC2-210ENST00000511949 MYL6BP14649 208 aa16.08■□□□□ 0.16
SH3TC2-210ENST00000511949 GOLGA2Q08379 1002 aa16.08■□□□□ 0.16
SH3TC2-210ENST00000511949 HDGFL1Q5TGJ6 251 aa16.08■□□□□ 0.16
SH3TC2-210ENST00000511949 AMIGO3Q86WK7 504 aa16.08■□□□□ 0.16
SH3TC2-210ENST00000511949 TBC1D2BQ9UPU7 963 aa16.08■□□□□ 0.16
SH3TC2-210ENST00000511949 DUSP27Q5VZP5 1158 aa16.07■□□□□ 0.16
SH3TC2-210ENST00000511949 CLEC4GQ6UXB4 293 aa16.07■□□□□ 0.16
SH3TC2-210ENST00000511949 SRP68Q9UHB9 627 aaKnown RBP16.07■□□□□ 0.16
SH3TC2-210ENST00000511949 KDM3BQ7LBC6 1761 aa16.07■□□□□ 0.16
SH3TC2-210ENST00000511949 TUBGCP6Q96RT7 1819 aa16.07■□□□□ 0.16
SH3TC2-210ENST00000511949 SENP3-EIF4A1A0A087X0R7 540 aa16.06■□□□□ 0.16
SH3TC2-210ENST00000511949 RGL2O15211 777 aa16.06■□□□□ 0.16
SH3TC2-210ENST00000511949 CCDC30Q5VVM6 783 aa16.06■□□□□ 0.16
SH3TC2-210ENST00000511949 SETDB2Q96T68 719 aa16.06■□□□□ 0.16
SH3TC2-210ENST00000511949 SGIP1Q9BQI5 828 aa16.06■□□□□ 0.16
SH3TC2-210ENST00000511949 FHDC1Q9C0D6 1143 aaPredicted RBP16.06■□□□□ 0.16
SH3TC2-210ENST00000511949 DBF4Q9UBU7 674 aaPredicted RBP16.06■□□□□ 0.16
SH3TC2-210ENST00000511949 CD2APQ9Y5K6 639 aa16.06■□□□□ 0.16
SH3TC2-210ENST00000511949 SRCAPQ6ZRS2 3230 aa16.06■□□□□ 0.16
SH3TC2-210ENST00000511949 NECTIN2Q92692 538 aa16.05■□□□□ 0.16
SH3TC2-210ENST00000511949 STK31Q9BXU1 1019 aa16.05■□□□□ 0.16
SH3TC2-210ENST00000511949 MYH14Q7Z406 1995 aaKnown RBP16.04■□□□□ 0.16
SH3TC2-210ENST00000511949 PIP4K2AP48426 406 aaPredicted RBP16.04■□□□□ 0.16
SH3TC2-210ENST00000511949 FKBP8Q14318 412 aa16.04■□□□□ 0.16
SH3TC2-210ENST00000511949 SYT17Q9BSW7 474 aa16.04■□□□□ 0.16
SH3TC2-210ENST00000511949 DDX21Q9NR30 783 aaKnown RBP eCLIP16.04■□□□□ 0.16
SH3TC2-210ENST00000511949 HYPKQ9NX55 129 aa16.04■□□□□ 0.16
SH3TC2-210ENST00000511949 ERVV-1B6SEH8 477 aa16.03■□□□□ 0.16
SH3TC2-210ENST00000511949 ELL2O00472 640 aaPredicted RBP16.03■□□□□ 0.16
SH3TC2-210ENST00000511949 BICDL1Q6ZP65 573 aa16.03■□□□□ 0.16
SH3TC2-210ENST00000511949 NBPF26B4DH59 902 aa16.02■□□□□ 0.16
SH3TC2-210ENST00000511949 E9PSI1 815 aa16.02■□□□□ 0.16
SH3TC2-210ENST00000511949 GTF2E1P29083 439 aaPredicted RBP16.02■□□□□ 0.16
SH3TC2-210ENST00000511949 TWISTNBQ3B726 338 aaPredicted RBP16.02■□□□□ 0.16
SH3TC2-210ENST00000511949 HSP90AB3PQ58FF7 597 aa16.02■□□□□ 0.16
SH3TC2-210ENST00000511949 NBPF10Q6P3W6 841 aaKnown RBP16.02■□□□□ 0.16
SH3TC2-210ENST00000511949 NBPF15Q8N660 670 aa16.02■□□□□ 0.16
SH3TC2-210ENST00000511949 TSR2Q969E8 191 aaKnown RBP16.02■□□□□ 0.16
SH3TC2-210ENST00000511949 LAMB4A4D0S4 1761 aa16.01■□□□□ 0.15
SH3TC2-210ENST00000511949 CAMTA2O94983 1202 aa16.01■□□□□ 0.15
SH3TC2-210ENST00000511949 DDX58O95786 925 aaKnown RBP16.01■□□□□ 0.15
SH3TC2-210ENST00000511949 ST5P78524 1137 aa16.01■□□□□ 0.15
SH3TC2-210ENST00000511949 AIMP1Q12904 312 aaKnown RBP16.01■□□□□ 0.15
SH3TC2-210ENST00000511949 CARMIL3Q8ND23 1372 aa16■□□□□ 0.15
SH3TC2-210ENST00000511949 MAP3K15Q6ZN16 1313 aa16■□□□□ 0.15
SH3TC2-210ENST00000511949 SERPINB2P05120 415 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms