RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 COL5A2P05997 1499 aaPredicted RBP11.79□□□□□ -0.52
NR1I3-230ENST00000511944 ZC3H6P61129 1189 aaKnown RBP11.79□□□□□ -0.52
NR1I3-230ENST00000511944 NEUROD2Q15784 382 aa11.79□□□□□ -0.52
NR1I3-230ENST00000511944 NBPF6Q5VWK0 638 aa11.79□□□□□ -0.52
NR1I3-230ENST00000511944 NBPF4Q96M43 638 aa11.79□□□□□ -0.52
NR1I3-230ENST00000511944 HS3ST6Q96QI5 342 aa11.79□□□□□ -0.52
NR1I3-230ENST00000511944 AXIN2Q9Y2T1 843 aa11.79□□□□□ -0.52
NR1I3-230ENST00000511944 SUPT16HQ9Y5B9 1047 aaKnown RBP11.79□□□□□ -0.52
NR1I3-230ENST00000511944 WDR17Q8IZU2 1322 aa11.79□□□□□ -0.52
NR1I3-230ENST00000511944 MAP3K5Q99683 1374 aa11.79□□□□□ -0.52
NR1I3-230ENST00000511944 ZNF853P0CG23 659 aa11.78□□□□□ -0.52
NR1I3-230ENST00000511944 RBM26Q5T8P6 1007 aaKnown RBP11.78□□□□□ -0.52
NR1I3-230ENST00000511944 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.78□□□□□ -0.52
NR1I3-230ENST00000511944 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.78□□□□□ -0.52
NR1I3-230ENST00000511944 ADAM33Q9BZ11 813 aa11.78□□□□□ -0.52
NR1I3-230ENST00000511944 SOS1Q07889 1333 aaPredicted RBP11.78□□□□□ -0.52
NR1I3-230ENST00000511944 GNAT3A8MTJ3 354 aa11.77□□□□□ -0.53
NR1I3-230ENST00000511944 PLEKHO1Q53GL0 409 aaPredicted RBP11.77□□□□□ -0.53
NR1I3-230ENST00000511944 TYW1BQ6NUM6 668 aa11.77□□□□□ -0.53
NR1I3-230ENST00000511944 POTEEQ6S8J3 1075 aa11.77□□□□□ -0.53
NR1I3-230ENST00000511944 CERKQ8TCT0 537 aa11.77□□□□□ -0.53
NR1I3-230ENST00000511944 RTF1Q92541 710 aaKnown RBP11.77□□□□□ -0.53
NR1I3-230ENST00000511944 DLG5Q8TDM6 1919 aa11.77□□□□□ -0.53
NR1I3-230ENST00000511944 FANCIQ9NVI1 1328 aa11.77□□□□□ -0.53
NR1I3-230ENST00000511944 CEMIPQ8WUJ3 1361 aa11.77□□□□□ -0.53
NR1I3-230ENST00000511944 ADAMTS7Q9UKP4 1686 aa11.76□□□□□ -0.53
NR1I3-230ENST00000511944 UBAP1LF5GYI3 381 aa11.76□□□□□ -0.53
NR1I3-230ENST00000511944 RRP1P56182 461 aaKnown RBP11.76□□□□□ -0.53
NR1I3-230ENST00000511944 MTHFSDQ2M296 383 aaKnown RBP11.76□□□□□ -0.53
NR1I3-230ENST00000511944 CABLES1Q8TDN4 633 aa11.76□□□□□ -0.53
NR1I3-230ENST00000511944 ZDHHC16Q969W1 377 aa11.76□□□□□ -0.53
NR1I3-230ENST00000511944 EPAS1Q99814 870 aa11.76□□□□□ -0.53
NR1I3-230ENST00000511944 CRB1P82279 1406 aa11.76□□□□□ -0.53
NR1I3-230ENST00000511944 PKD1L3Q7Z443 1732 aa11.75□□□□□ -0.53
NR1I3-230ENST00000511944 AKAP4Q5JQC9 854 aa11.75□□□□□ -0.53
NR1I3-230ENST00000511944 RAPGEF4Q8WZA2 1011 aa11.75□□□□□ -0.53
NR1I3-230ENST00000511944 LTV1Q96GA3 475 aaPredicted RBP11.75□□□□□ -0.53
NR1I3-230ENST00000511944 CARD10Q9BWT7 1032 aa11.75□□□□□ -0.53
NR1I3-230ENST00000511944 JCADQ9P266 1359 aa11.75□□□□□ -0.53
NR1I3-230ENST00000511944 PARP4Q9UKK3 1724 aaKnown RBP11.74□□□□□ -0.53
NR1I3-230ENST00000511944 RGPD5Q99666 1765 aa11.74□□□□□ -0.53
NR1I3-230ENST00000511944 ZBTB7CA1YPR0 619 aa11.74□□□□□ -0.53
NR1I3-230ENST00000511944 CHL1O00533 1208 aa11.74□□□□□ -0.53
NR1I3-230ENST00000511944 BRPF1P55201 1214 aaPredicted RBP11.74□□□□□ -0.53
NR1I3-230ENST00000511944 EN1Q05925 392 aaPredicted RBP11.74□□□□□ -0.53
NR1I3-230ENST00000511944 TSR1Q2NL82 804 aaKnown RBP11.74□□□□□ -0.53
NR1I3-230ENST00000511944 PPP4R3BQ5MIZ7 849 aa11.74□□□□□ -0.53
NR1I3-230ENST00000511944 PLCH1Q4KWH8 1693 aa11.74□□□□□ -0.53
NR1I3-230ENST00000511944 SENP3-EIF4A1A0A087X0R7 540 aa11.73□□□□□ -0.53
NR1I3-230ENST00000511944 TATP17735 454 aaPredicted RBP11.73□□□□□ -0.53
NR1I3-230ENST00000511944 ALDH1L2Q3SY69 923 aa11.73□□□□□ -0.53
NR1I3-230ENST00000511944 SPATA31A6Q5VVP1 1343 aa11.73□□□□□ -0.53
NR1I3-230ENST00000511944 CHMP4AQ9BY43 222 aa11.73□□□□□ -0.53
NR1I3-230ENST00000511944 NLRP2Q9NX02 1062 aa11.73□□□□□ -0.53
NR1I3-230ENST00000511944 NWD2Q9ULI1 1742 aa11.73□□□□□ -0.53
NR1I3-230ENST00000511944 SPG7Q9UQ90 795 aa11.73□□□□□ -0.53
NR1I3-230ENST00000511944 RGPD2P0DJD1 1756 aa11.72□□□□□ -0.53
NR1I3-230ENST00000511944 PSDA5PKW4 1024 aaPredicted RBP11.72□□□□□ -0.53
NR1I3-230ENST00000511944 HSP90AB1P08238 724 aaKnown RBP11.72□□□□□ -0.53
NR1I3-230ENST00000511944 CSB-PGBD3P0DP91 1061 aa11.72□□□□□ -0.53
NR1I3-230ENST00000511944 CHRNA2Q15822 529 aa11.72□□□□□ -0.53
NR1I3-230ENST00000511944 C1orf141Q5JVX7 400 aa11.72□□□□□ -0.53
NR1I3-230ENST00000511944 SMYD5Q6GMV2 418 aa11.72□□□□□ -0.53
NR1I3-230ENST00000511944 POTEGQ6S5H5 508 aa11.72□□□□□ -0.53
NR1I3-230ENST00000511944 CDHR5Q9HBB8 845 aa11.72□□□□□ -0.53
NR1I3-230ENST00000511944 MEGF6O75095 1541 aa11.71□□□□□ -0.53
NR1I3-230ENST00000511944 MRC1P22897 1456 aa11.71□□□□□ -0.53
NR1I3-230ENST00000511944 FAM83GA6ND36 823 aa11.71□□□□□ -0.53
NR1I3-230ENST00000511944 POTEMA6NI47 508 aa11.71□□□□□ -0.53
NR1I3-230ENST00000511944 RARSP54136 660 aaKnown RBP11.71□□□□□ -0.53
NR1I3-230ENST00000511944 AAMPQ13685 434 aa11.71□□□□□ -0.53
NR1I3-230ENST00000511944 ZNF530Q6P9A1 599 aaPredicted RBP11.71□□□□□ -0.53
NR1I3-230ENST00000511944 USHBP1Q8N6Y0 703 aa11.71□□□□□ -0.53
NR1I3-230ENST00000511944 FBXW7Q969H0 707 aa11.71□□□□□ -0.53
NR1I3-230ENST00000511944 KIF16BQ96L93 1317 aa11.7□□□□□ -0.54
NR1I3-230ENST00000511944 MS4A1P11836 297 aa11.7□□□□□ -0.54
NR1I3-230ENST00000511944 PDE3AQ14432 1141 aa11.7□□□□□ -0.54
NR1I3-230ENST00000511944 C6orf132Q5T0Z8 1188 aa11.7□□□□□ -0.54
NR1I3-230ENST00000511944 ZNF687Q8N1G0 1237 aa11.7□□□□□ -0.54
NR1I3-230ENST00000511944 CDCA7Q9BWT1 371 aaPredicted RBP11.7□□□□□ -0.54
NR1I3-230ENST00000511944 BCL2L12Q9HB09 334 aa11.7□□□□□ -0.54
NR1I3-230ENST00000511944 MBIPQ9NS73 344 aa11.7□□□□□ -0.54
NR1I3-230ENST00000511944 SLIT2O94813 1529 aa11.7□□□□□ -0.54
NR1I3-230ENST00000511944 PCDH11XQ9BZA7 1347 aa11.69□□□□□ -0.54
NR1I3-230ENST00000511944 PCDH11YQ9BZA8 1340 aa11.69□□□□□ -0.54
NR1I3-230ENST00000511944 MAP3K7O43318 606 aa11.69□□□□□ -0.54
NR1I3-230ENST00000511944 HOXB7P09629 217 aa11.69□□□□□ -0.54
NR1I3-230ENST00000511944 PIP4K2BP78356 416 aa11.69□□□□□ -0.54
NR1I3-230ENST00000511944 EXOSC9Q06265 439 aaKnown RBP11.69□□□□□ -0.54
NR1I3-230ENST00000511944 TAF7Q15545 349 aaPredicted RBP11.69□□□□□ -0.54
NR1I3-230ENST00000511944 TOM1L2Q6ZVM7 507 aa11.69□□□□□ -0.54
NR1I3-230ENST00000511944 TSR2Q969E8 191 aaKnown RBP11.69□□□□□ -0.54
NR1I3-230ENST00000511944 THRAP3Q9Y2W1 955 aaKnown RBP11.69□□□□□ -0.54
NR1I3-230ENST00000511944 DISP2A7MBM2 1401 aa11.69□□□□□ -0.54
NR1I3-230ENST00000511944 MCM10Q7L590 875 aa11.68□□□□□ -0.54
NR1I3-230ENST00000511944 IFNL2Q8IZJ0 200 aa11.68□□□□□ -0.54
NR1I3-230ENST00000511944 IL17REQ8NFR9 667 aa11.68□□□□□ -0.54
NR1I3-230ENST00000511944 NPDC1Q9NQX5 325 aaPredicted RBP11.68□□□□□ -0.54
NR1I3-230ENST00000511944 NRAPQ86VF7 1730 aa11.68□□□□□ -0.54
NR1I3-230ENST00000511944 GPR37O15354 613 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms