RNA–Protein interactions for RNA: ENST00000511255.1

SMAD1-210, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-210ENST00000511255 NME9Q86XW9 330 aa10.67□□□□□ -0.7
SMAD1-210ENST00000511255 WBP1LQ9NX94 342 aa10.67□□□□□ -0.7
SMAD1-210ENST00000511255 NRKQ7Z2Y5 1582 aa10.67□□□□□ -0.7
SMAD1-210ENST00000511255 CD163L1Q9NR16 1453 aa10.67□□□□□ -0.7
SMAD1-210ENST00000511255 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.67□□□□□ -0.7
SMAD1-210ENST00000511255 EDC4Q6P2E9 1401 aaKnown RBP10.67□□□□□ -0.7
SMAD1-210ENST00000511255 PIK3C2AO00443 1686 aa10.66□□□□□ -0.7
SMAD1-210ENST00000511255 RCCD1A6NED2 376 aa10.66□□□□□ -0.7
SMAD1-210ENST00000511255 OATP04181 439 aa10.66□□□□□ -0.7
SMAD1-210ENST00000511255 SWT1Q5T5J6 900 aaKnown RBP10.66□□□□□ -0.7
SMAD1-210ENST00000511255 METTL3Q86U44 580 aaKnown RBP10.66□□□□□ -0.7
SMAD1-210ENST00000511255 KCNH5Q8NCM2 988 aa10.66□□□□□ -0.7
SMAD1-210ENST00000511255 ZC3H15Q8WU90 426 aaKnown RBP10.66□□□□□ -0.7
SMAD1-210ENST00000511255 PHOX2BQ99453 314 aa10.66□□□□□ -0.7
SMAD1-210ENST00000511255 NWD2Q9ULI1 1742 aa10.66□□□□□ -0.7
SMAD1-210ENST00000511255 MON2Q7Z3U7 1717 aa10.65□□□□□ -0.7
SMAD1-210ENST00000511255 USP35Q9P2H5 1018 aa10.65□□□□□ -0.7
SMAD1-210ENST00000511255 CPDO75976 1380 aa10.65□□□□□ -0.71
SMAD1-210ENST00000511255 ANKRD36BQ8N2N9 1353 aa10.65□□□□□ -0.71
SMAD1-210ENST00000511255 LCE2BO14633 110 aa10.64□□□□□ -0.71
SMAD1-210ENST00000511255 SEPT12Q8IYM1 358 aa10.64□□□□□ -0.71
SMAD1-210ENST00000511255 TMEM134Q9H6X4 195 aa10.64□□□□□ -0.71
SMAD1-210ENST00000511255 TSR3Q9UJK0 312 aaKnown RBP10.64□□□□□ -0.71
SMAD1-210ENST00000511255 HPS5Q9UPZ3 1129 aa10.64□□□□□ -0.71
SMAD1-210ENST00000511255 GLI3P10071 1580 aa10.64□□□□□ -0.71
SMAD1-210ENST00000511255 NRAPQ86VF7 1730 aa10.64□□□□□ -0.71
SMAD1-210ENST00000511255 SLIT3O75094 1523 aa10.63□□□□□ -0.71
SMAD1-210ENST00000511255 IRF6O14896 467 aa10.63□□□□□ -0.71
SMAD1-210ENST00000511255 DNAJB2P25686 324 aa10.63□□□□□ -0.71
SMAD1-210ENST00000511255 MAP2K5Q13163 448 aa10.63□□□□□ -0.71
SMAD1-210ENST00000511255 COG3Q96JB2 828 aa10.63□□□□□ -0.71
SMAD1-210ENST00000511255 SPATA31A5Q5VU36 1347 aa10.62□□□□□ -0.71
SMAD1-210ENST00000511255 SPATA31A7Q8IWB4 1347 aa10.62□□□□□ -0.71
SMAD1-210ENST00000511255 ZMYND10O75800 440 aa10.62□□□□□ -0.71
SMAD1-210ENST00000511255 CSB-PGBD3P0DP91 1061 aa10.62□□□□□ -0.71
SMAD1-210ENST00000511255 LARP1Q6PKG0 1096 aaKnown RBP10.62□□□□□ -0.71
SMAD1-210ENST00000511255 USP31Q70CQ4 1352 aa10.62□□□□□ -0.71
SMAD1-210ENST00000511255 CAMTA1Q9Y6Y1 1673 aa10.61□□□□□ -0.71
SMAD1-210ENST00000511255 PPP4CP60510 307 aa10.61□□□□□ -0.71
SMAD1-210ENST00000511255 ARHGEF25Q86VW2 580 aa10.61□□□□□ -0.71
SMAD1-210ENST00000511255 NLRP7Q8WX94 980 aa10.61□□□□□ -0.71
SMAD1-210ENST00000511255 AATKQ6ZMQ8 1374 aa10.61□□□□□ -0.71
SMAD1-210ENST00000511255 SPATA31A1Q5TZJ5 1347 aa10.6□□□□□ -0.71
SMAD1-210ENST00000511255 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.6□□□□□ -0.71
SMAD1-210ENST00000511255 BARGINQ6ZT62 677 aa10.6□□□□□ -0.71
SMAD1-210ENST00000511255 TOM1L2Q6ZVM7 507 aa10.6□□□□□ -0.71
SMAD1-210ENST00000511255 GGNBP2Q9H3C7 697 aa10.6□□□□□ -0.71
SMAD1-210ENST00000511255 OVOS2A0A0J9YW53 1432 aa10.59□□□□□ -0.71
SMAD1-210ENST00000511255 OVOS2Q6IE36 1432 aa10.59□□□□□ -0.71
SMAD1-210ENST00000511255 NSD3Q9BZ95 1437 aa10.59□□□□□ -0.71
SMAD1-210ENST00000511255 NFAT5O94916 1531 aa10.59□□□□□ -0.71
SMAD1-210ENST00000511255 KRT27Q7Z3Y8 459 aa10.59□□□□□ -0.71
SMAD1-210ENST00000511255 TCP11L2Q8N4U5 519 aa10.59□□□□□ -0.71
SMAD1-210ENST00000511255 COL5A2P05997 1499 aaPredicted RBP10.59□□□□□ -0.71
SMAD1-210ENST00000511255 LMO7Q8WWI1 1683 aa10.59□□□□□ -0.71
SMAD1-210ENST00000511255 FYB1O15117 783 aa10.58□□□□□ -0.72
SMAD1-210ENST00000511255 MYOM1P52179 1685 aa10.57□□□□□ -0.72
SMAD1-210ENST00000511255 AMPHP49418 695 aa10.57□□□□□ -0.72
SMAD1-210ENST00000511255 SLF2Q8IX21 1173 aa10.57□□□□□ -0.72
SMAD1-210ENST00000511255 CARD14Q9BXL6 1004 aa10.57□□□□□ -0.72
SMAD1-210ENST00000511255 CRB1P82279 1406 aa10.57□□□□□ -0.72
SMAD1-210ENST00000511255 WDR17Q8IZU2 1322 aa10.57□□□□□ -0.72
SMAD1-210ENST00000511255 USP54Q70EL1 1684 aa10.57□□□□□ -0.72
SMAD1-210ENST00000511255 RNF40O75150 1001 aa10.56□□□□□ -0.72
SMAD1-210ENST00000511255 FBLN1P23142 703 aa10.56□□□□□ -0.72
SMAD1-210ENST00000511255 PDE3BQ13370 1112 aa10.56□□□□□ -0.72
SMAD1-210ENST00000511255 FAM182BQ5T319 152 aa10.56□□□□□ -0.72
SMAD1-210ENST00000511255 NYAP1Q6ZVC0 841 aa10.56□□□□□ -0.72
SMAD1-210ENST00000511255 CCDC102AQ96A19 550 aa10.56□□□□□ -0.72
SMAD1-210ENST00000511255 LTV1Q96GA3 475 aaPredicted RBP10.56□□□□□ -0.72
SMAD1-210ENST00000511255 NLRP2Q9NX02 1062 aa10.56□□□□□ -0.72
SMAD1-210ENST00000511255 THRAP3Q9Y2W1 955 aaKnown RBP10.56□□□□□ -0.72
SMAD1-210ENST00000511255 CGNL1Q0VF96 1302 aa10.56□□□□□ -0.72
SMAD1-210ENST00000511255 C11orf95C9JLR9 678 aaPredicted RBP10.55□□□□□ -0.72
SMAD1-210ENST00000511255 SLC10A3P09131 477 aa10.55□□□□□ -0.72
SMAD1-210ENST00000511255 APLP1P51693 650 aa10.55□□□□□ -0.72
SMAD1-210ENST00000511255 SF3B2Q13435 895 aaKnown RBP10.55□□□□□ -0.72
SMAD1-210ENST00000511255 RRS1Q15050 365 aaKnown RBP10.55□□□□□ -0.72
SMAD1-210ENST00000511255 ANKRD24Q8TF21 1146 aa10.55□□□□□ -0.72
SMAD1-210ENST00000511255 PANK3Q9H999 370 aa10.55□□□□□ -0.72
SMAD1-210ENST00000511255 BRWD3Q6RI45 1802 aa10.55□□□□□ -0.72
SMAD1-210ENST00000511255 MAP3K19Q56UN5 1328 aa10.55□□□□□ -0.72
SMAD1-210ENST00000511255 COL18A1P39060 1754 aa10.54□□□□□ -0.72
SMAD1-210ENST00000511255 DAXXQ9UER7 740 aaPredicted RBP10.54□□□□□ -0.72
SMAD1-210ENST00000511255 LTN1O94822 1766 aa10.54□□□□□ -0.72
SMAD1-210ENST00000511255 KIF7Q2M1P5 1343 aa10.54□□□□□ -0.72
SMAD1-210ENST00000511255 THSD7AQ9UPZ6 1657 aa10.53□□□□□ -0.72
SMAD1-210ENST00000511255 ABCC6O95255 1503 aa10.53□□□□□ -0.72
SMAD1-210ENST00000511255 RGPD5Q99666 1765 aa10.53□□□□□ -0.72
SMAD1-210ENST00000511255 IP6K1Q92551 441 aa10.53□□□□□ -0.72
SMAD1-210ENST00000511255 CARD10Q9BWT7 1032 aa10.53□□□□□ -0.72
SMAD1-210ENST00000511255 KIF20BQ96Q89 1820 aa10.53□□□□□ -0.72
SMAD1-210ENST00000511255 BLMP54132 1417 aaPredicted RBP10.52□□□□□ -0.73
SMAD1-210ENST00000511255 PPM1GO15355 546 aaPredicted RBP10.52□□□□□ -0.73
SMAD1-210ENST00000511255 HOXC9P31274 260 aa10.52□□□□□ -0.73
SMAD1-210ENST00000511255 TNNT2P45379 298 aaPredicted RBP10.52□□□□□ -0.73
SMAD1-210ENST00000511255 DDB1Q16531 1140 aa10.52□□□□□ -0.73
SMAD1-210ENST00000511255 TRAF7Q6Q0C0 670 aa10.52□□□□□ -0.73
SMAD1-210ENST00000511255 CCDC125Q86Z20 511 aa10.52□□□□□ -0.73
SMAD1-210ENST00000511255 KRI1Q8N9T8 703 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms