RNA–Protein interactions for RNA: ENST00000510557.5

LIN54-209, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 2 BASIC

Gene LIN54, Length 2,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-209ENST00000510557 NEK4P51957 841 aa23.21■■□□□ 1.31
LIN54-209ENST00000510557 TMEM63CQ9P1W3 806 aa23.21■■□□□ 1.31
LIN54-209ENST00000510557 PKP1Q13835 747 aa23.2■■□□□ 1.3
LIN54-209ENST00000510557 THEMISQ8N1K5 641 aaPredicted RBP23.2■■□□□ 1.3
LIN54-209ENST00000510557 PRIMPOLQ96LW4 560 aa23.2■■□□□ 1.3
LIN54-209ENST00000510557 GTPBP4Q9BZE4 634 aaKnown RBP23.2■■□□□ 1.3
LIN54-209ENST00000510557 DNTTIP2Q5QJE6 756 aaKnown RBP23.2■■□□□ 1.3
LIN54-209ENST00000510557 ZGPATQ8N5A5 531 aaKnown RBP23.2■■□□□ 1.3
LIN54-209ENST00000510557 RGPD8O14715 1765 aaPredicted RBP23.19■■□□□ 1.3
LIN54-209ENST00000510557 USP54Q70EL1 1684 aa23.19■■□□□ 1.3
LIN54-209ENST00000510557 PNMA6EA0A0J9YXQ4 647 aa23.19■■□□□ 1.3
LIN54-209ENST00000510557 HMGN5P82970 282 aaKnown RBP23.19■■□□□ 1.3
LIN54-209ENST00000510557 IL17RAQ96F46 866 aa23.19■■□□□ 1.3
LIN54-209ENST00000510557 TRIM6-TRIM34B2RNG4 842 aa23.18■■□□□ 1.3
LIN54-209ENST00000510557 RAB11FIP3O75154 756 aa23.18■■□□□ 1.3
LIN54-209ENST00000510557 UBTFL1P0CB47 393 aaPredicted RBP23.18■■□□□ 1.3
LIN54-209ENST00000510557 CHMLP26374 656 aa23.18■■□□□ 1.3
LIN54-209ENST00000510557 FGD1P98174 961 aa23.18■■□□□ 1.3
LIN54-209ENST00000510557 TUBGCP6Q96RT7 1819 aa23.18■■□□□ 1.3
LIN54-209ENST00000510557 MBD3O95983 291 aa23.17■■□□□ 1.3
LIN54-209ENST00000510557 IL17REQ8NFR9 667 aa23.17■■□□□ 1.3
LIN54-209ENST00000510557 INTS4Q96HW7 963 aaKnown RBP23.17■■□□□ 1.3
LIN54-209ENST00000510557 TMX3Q96JJ7 454 aa23.17■■□□□ 1.3
LIN54-209ENST00000510557 LRRFIP2Q9Y608 721 aaKnown RBP23.17■■□□□ 1.3
LIN54-209ENST00000510557 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.17■■□□□ 1.3
LIN54-209ENST00000510557 RILPL2Q969X0 211 aa23.16■■□□□ 1.3
LIN54-209ENST00000510557 CUL4AQ13619 759 aa23.16■■□□□ 1.3
LIN54-209ENST00000510557 KIF20AO95235 890 aa23.15■■□□□ 1.3
LIN54-209ENST00000510557 GTF2F1P35269 517 aaKnown RBP eCLIP23.15■■□□□ 1.35e-7■■■■■ 29.3
LIN54-209ENST00000510557 SSH3Q8TE77 659 aa23.15■■□□□ 1.3
LIN54-209ENST00000510557 USP44Q9H0E7 712 aa23.15■■□□□ 1.3
LIN54-209ENST00000510557 ZDHHC9Q9Y397 364 aa23.15■■□□□ 1.3
LIN54-209ENST00000510557 NWD1Q149M9 1564 aa23.15■■□□□ 1.3
LIN54-209ENST00000510557 CEBPAP49715 358 aaPredicted RBP23.15■■□□□ 1.3
LIN54-209ENST00000510557 RNF214Q8ND24 703 aa23.15■■□□□ 1.3
LIN54-209ENST00000510557 ANO2Q9NQ90 1003 aa23.15■■□□□ 1.3
LIN54-209ENST00000510557 HDGFL1Q5TGJ6 251 aa23.14■■□□□ 1.29
LIN54-209ENST00000510557 ZNF710Q8N1W2 664 aa23.14■■□□□ 1.29
LIN54-209ENST00000510557 ABTB2Q8N961 1025 aa23.14■■□□□ 1.29
LIN54-209ENST00000510557 NECTIN2Q92692 538 aa23.13■■□□□ 1.29
LIN54-209ENST00000510557 TSPY26PQ9H489 355 aa23.13■■□□□ 1.29
LIN54-209ENST00000510557 LETM1O95202 739 aaPredicted RBP23.12■■□□□ 1.29
LIN54-209ENST00000510557 HOXB7P09629 217 aa23.12■■□□□ 1.29
LIN54-209ENST00000510557 TSHZ3Q63HK5 1081 aa23.12■■□□□ 1.29
LIN54-209ENST00000510557 CBX1P83916 185 aa23.12■■□□□ 1.29
LIN54-209ENST00000510557 PLPPR3Q6T4P5 718 aa23.12■■□□□ 1.29
LIN54-209ENST00000510557 NSFL1CQ9UNZ2 370 aaKnown RBP23.11■■□□□ 1.29
LIN54-209ENST00000510557 PIBF1Q8WXW3 757 aa23.11■■□□□ 1.29
LIN54-209ENST00000510557 MARF1Q9Y4F3 1742 aaKnown RBP23.1■■□□□ 1.29
LIN54-209ENST00000510557 BRD1O95696 1058 aa23.1■■□□□ 1.29
LIN54-209ENST00000510557 POLA2Q14181 598 aa23.09■■□□□ 1.29
LIN54-209ENST00000510557 HSP90AB4PQ58FF6 505 aa23.09■■□□□ 1.29
LIN54-209ENST00000510557 SYAP1Q96A49 352 aaPredicted RBP23.09■■□□□ 1.29
LIN54-209ENST00000510557 PPP4R3BQ5MIZ7 849 aa23.08■■□□□ 1.29
LIN54-209ENST00000510557 CEMIPQ8WUJ3 1361 aa23.08■■□□□ 1.29
LIN54-209ENST00000510557 KIF1BPQ96EK5 621 aa23.08■■□□□ 1.29
LIN54-209ENST00000510557 LTV1Q96GA3 475 aaPredicted RBP23.08■■□□□ 1.29
LIN54-209ENST00000510557 PALD1Q9ULE6 856 aa23.08■■□□□ 1.29
LIN54-209ENST00000510557 KIF3AQ9Y496 699 aa23.08■■□□□ 1.29
LIN54-209ENST00000510557 SURF6O75683 361 aaKnown RBP23.07■■□□□ 1.28
LIN54-209ENST00000510557 NOLC1Q14978 699 aaKnown RBP eCLIP23.07■■□□□ 1.28
LIN54-209ENST00000510557 NUTM2GQ5VZR2 741 aa23.07■■□□□ 1.28
LIN54-209ENST00000510557 TSC1Q92574 1164 aa23.07■■□□□ 1.28
LIN54-209ENST00000510557 JARID2Q92833 1246 aaPredicted RBP23.07■■□□□ 1.28
LIN54-209ENST00000510557 PPP1R42Q7Z4L9 355 aa23.07■■□□□ 1.28
LIN54-209ENST00000510557 ZBTB7CA1YPR0 619 aa23.06■■□□□ 1.28
LIN54-209ENST00000510557 HSPA4P34932 840 aa23.06■■□□□ 1.28
LIN54-209ENST00000510557 IP6K1Q92551 441 aa23.06■■□□□ 1.28
LIN54-209ENST00000510557 RHPN1Q8TCX5 695 aa23.06■■□□□ 1.28
LIN54-209ENST00000510557 PHAXQ9H814 394 aaKnown RBP23.06■■□□□ 1.28
LIN54-209ENST00000510557 KCNA6P17658 529 aa23.05■■□□□ 1.28
LIN54-209ENST00000510557 PHF14O94880 888 aa23.05■■□□□ 1.28
LIN54-209ENST00000510557 ATP2B3Q16720 1220 aa23.05■■□□□ 1.28
LIN54-209ENST00000510557 CNTROBQ8N137 903 aa23.05■■□□□ 1.28
LIN54-209ENST00000510557 IL1RAPL2Q9NP60 686 aa23.05■■□□□ 1.28
LIN54-209ENST00000510557 EIF4A1P60842 406 aaKnown RBP23.04■■□□□ 1.28
LIN54-209ENST00000510557 CHAMP1Q96JM3 812 aa23.04■■□□□ 1.28
LIN54-209ENST00000510557 SRGAP3O43295 1099 aa23.03■■□□□ 1.28
LIN54-209ENST00000510557 UNC5CLQ8IV45 518 aa23.03■■□□□ 1.28
LIN54-209ENST00000510557 UVSSAQ2YD98 709 aa23.03■■□□□ 1.28
LIN54-209ENST00000510557 DNAAF4Q8WXU2 420 aa23.03■■□□□ 1.28
LIN54-209ENST00000510557 HDAC5Q9UQL6 1122 aa23.03■■□□□ 1.28
LIN54-209ENST00000510557 WDR33Q9C0J8 1336 aaKnown RBP23.03■■□□□ 1.28
LIN54-209ENST00000510557 C14orf37Q86TY3 774 aa23.02■■□□□ 1.28
LIN54-209ENST00000510557 NUTM1Q86Y26 1132 aa23.02■■□□□ 1.28
LIN54-209ENST00000510557 FAM184AQ8NB25 1140 aa23.02■■□□□ 1.28
LIN54-209ENST00000510557 MED1Q15648 1581 aaPredicted RBP23.02■■□□□ 1.28
LIN54-209ENST00000510557 PI4K2BQ8TCG2 481 aa23.02■■□□□ 1.28
LIN54-209ENST00000510557 PHF8Q9UPP1 1060 aa23.02■■□□□ 1.28
LIN54-209ENST00000510557 EIF2S2P20042 333 aaKnown RBP23.01■■□□□ 1.27
LIN54-209ENST00000510557 LTN1O94822 1766 aa23.01■■□□□ 1.27
LIN54-209ENST00000510557 ADGRL3Q9HAR2 1447 aa23.01■■□□□ 1.27
LIN54-209ENST00000510557 RAD50Q92878 1312 aa23.01■■□□□ 1.27
LIN54-209ENST00000510557 SGSM2O43147 1006 aa23.01■■□□□ 1.27
LIN54-209ENST00000510557 BEND3Q5T5X7 828 aa23.01■■□□□ 1.27
LIN54-209ENST00000510557 PDCL2Q8N4E4 241 aa23.01■■□□□ 1.27
LIN54-209ENST00000510557 KCNH5Q8NCM2 988 aa23.01■■□□□ 1.27
LIN54-209ENST00000510557 BCL2L12Q9HB09 334 aa23.01■■□□□ 1.27
LIN54-209ENST00000510557 SPTLC3Q9NUV7 552 aa23.01■■□□□ 1.27
LIN54-209ENST00000510557 FER1L4A9Z1Z3 1794 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms