RNA–Protein interactions for RNA: ENST00000510108.1

NEK1-205, Transcript of NIMA related kinase 1, humanhuman

TSL 5

Gene NEK1, Length 1,304 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-205ENST00000510108 TWISTNBQ3B726 338 aaPredicted RBP13.13□□□□□ -0.31
NEK1-205ENST00000510108 ZNF467Q7Z7K2 595 aaPredicted RBP13.13□□□□□ -0.31
NEK1-205ENST00000510108 SLC52A2Q9HAB3 445 aa13.13□□□□□ -0.31
NEK1-205ENST00000510108 PCDHB8Q9UN66 801 aa13.13□□□□□ -0.31
NEK1-205ENST00000510108 HEG1Q9ULI3 1381 aa13.13□□□□□ -0.31
NEK1-205ENST00000510108 GALR2O43603 387 aaPredicted RBP13.13□□□□□ -0.31
NEK1-205ENST00000510108 HOXB7P09629 217 aa13.13□□□□□ -0.31
NEK1-205ENST00000510108 TSPYL6Q8N831 410 aa13.13□□□□□ -0.31
NEK1-205ENST00000510108 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.13□□□□□ -0.31
NEK1-205ENST00000510108 C8orf58Q8NAV2 365 aa13.13□□□□□ -0.31
NEK1-205ENST00000510108 GJD4Q96KN9 370 aaPredicted RBP13.13□□□□□ -0.31
NEK1-205ENST00000510108 DOT1LQ8TEK3 1739 aa13.12□□□□□ -0.31
NEK1-205ENST00000510108 LAMB4A4D0S4 1761 aa13.12□□□□□ -0.31
NEK1-205ENST00000510108 ITGB4P16144 1822 aa13.12□□□□□ -0.31
NEK1-205ENST00000510108 ERVV-2B6SEH9 535 aa13.12□□□□□ -0.31
NEK1-205ENST00000510108 RIOK3O14730 519 aaKnown RBP13.12□□□□□ -0.31
NEK1-205ENST00000510108 BCAR3O75815 825 aa13.12□□□□□ -0.31
NEK1-205ENST00000510108 CACNA1FO60840 1977 aa13.11□□□□□ -0.31
NEK1-205ENST00000510108 BTBD11A6QL63 1104 aa13.11□□□□□ -0.31
NEK1-205ENST00000510108 EIF4A1P60842 406 aaKnown RBP13.11□□□□□ -0.31
NEK1-205ENST00000510108 SSH1Q8WYL5 1049 aa13.11□□□□□ -0.31
NEK1-205ENST00000510108 C5P01031 1676 aa13.1□□□□□ -0.31
NEK1-205ENST00000510108 KIF16BQ96L93 1317 aa13.1□□□□□ -0.31
NEK1-205ENST00000510108 KCPQ6ZWJ8 1503 aa13.1□□□□□ -0.31
NEK1-205ENST00000510108 EXOC5O00471 708 aa13.1□□□□□ -0.31
NEK1-205ENST00000510108 MIS18AQ9NYP9 233 aa13.1□□□□□ -0.31
NEK1-205ENST00000510108 CICQ96RK0 1608 aaPredicted RBP13.09□□□□□ -0.31
NEK1-205ENST00000510108 KRT24Q2M2I5 525 aa13.09□□□□□ -0.31
NEK1-205ENST00000510108 SMC4Q9NTJ3 1288 aa13.09□□□□□ -0.31
NEK1-205ENST00000510108 BCL9O00512 1426 aa13.08□□□□□ -0.32
NEK1-205ENST00000510108 N4BP2Q86UW6 1770 aaPredicted RBP13.08□□□□□ -0.32
NEK1-205ENST00000510108 PDE3AQ14432 1141 aa13.08□□□□□ -0.32
NEK1-205ENST00000510108 DDB1Q16531 1140 aa13.08□□□□□ -0.32
NEK1-205ENST00000510108 FAM98CQ17RN3 349 aaKnown RBP13.08□□□□□ -0.32
NEK1-205ENST00000510108 MRPL50Q8N5N7 158 aaKnown RBP13.08□□□□□ -0.32
NEK1-205ENST00000510108 PLIN1O60240 522 aa13.07□□□□□ -0.32
NEK1-205ENST00000510108 ONECUT3O60422 494 aaPredicted RBP13.07□□□□□ -0.32
NEK1-205ENST00000510108 CABP4P57796 275 aa13.07□□□□□ -0.32
NEK1-205ENST00000510108 ZNF790Q6PG37 636 aa13.07□□□□□ -0.32
NEK1-205ENST00000510108 NFATC2IPQ8NCF5 419 aa13.07□□□□□ -0.32
NEK1-205ENST00000510108 DDX54Q8TDD1 881 aaKnown RBP13.07□□□□□ -0.32
NEK1-205ENST00000510108 ARHGAP45Q92619 1136 aa13.07□□□□□ -0.32
NEK1-205ENST00000510108 CHMP4AQ9BY43 222 aa13.07□□□□□ -0.32
NEK1-205ENST00000510108 KCNQ3O43525 872 aa13.06□□□□□ -0.32
NEK1-205ENST00000510108 ZKSCAN2Q63HK3 967 aa13.06□□□□□ -0.32
NEK1-205ENST00000510108 NHSQ6T4R5 1651 aa13.05□□□□□ -0.32
NEK1-205ENST00000510108 ELL2O00472 640 aaPredicted RBP13.05□□□□□ -0.32
NEK1-205ENST00000510108 IRX6P78412 446 aaPredicted RBP13.05□□□□□ -0.32
NEK1-205ENST00000510108 POTEAQ6S8J7 498 aa13.05□□□□□ -0.32
NEK1-205ENST00000510108 BCL2L13Q9BXK5 485 aa13.05□□□□□ -0.32
NEK1-205ENST00000510108 TRPC6Q9Y210 931 aa13.05□□□□□ -0.32
NEK1-205ENST00000510108 ZNF831Q5JPB2 1677 aa13.05□□□□□ -0.32
NEK1-205ENST00000510108 RGS12O14924 1447 aa13.04□□□□□ -0.32
NEK1-205ENST00000510108 GIGYF1O75420 1035 aaPredicted RBP13.04□□□□□ -0.32
NEK1-205ENST00000510108 MS4A1P11836 297 aa13.04□□□□□ -0.32
NEK1-205ENST00000510108 C20orf194Q5TEA3 1177 aa13.04□□□□□ -0.32
NEK1-205ENST00000510108 CCDC30Q5VVM6 783 aa13.04□□□□□ -0.32
NEK1-205ENST00000510108 ATF7IPQ6VMQ6 1270 aa13.04□□□□□ -0.32
NEK1-205ENST00000510108 MARCH10Q8NA82 808 aaPredicted RBP13.04□□□□□ -0.32
NEK1-205ENST00000510108 IPO8O15397 1037 aaKnown RBP13.03□□□□□ -0.32
NEK1-205ENST00000510108 TRIM27P14373 513 aa13.03□□□□□ -0.32
NEK1-205ENST00000510108 SEPT12Q8IYM1 358 aa13.03□□□□□ -0.32
NEK1-205ENST00000510108 TTC5Q8N0Z6 440 aa13.03□□□□□ -0.32
NEK1-205ENST00000510108 TMOD3Q9NYL9 352 aa13.03□□□□□ -0.32
NEK1-205ENST00000510108 RGS17Q9UGC6 210 aaPredicted RBP13.03□□□□□ -0.32
NEK1-205ENST00000510108 PTPRCP08575 1304 aa13.03□□□□□ -0.32
NEK1-205ENST00000510108 CANXP27824 592 aaKnown RBP13.02□□□□□ -0.33
NEK1-205ENST00000510108 SLC39A6Q13433 755 aa13.02□□□□□ -0.33
NEK1-205ENST00000510108 PDAP1Q13442 181 aaKnown RBP13.02□□□□□ -0.33
NEK1-205ENST00000510108 HDGFL1Q5TGJ6 251 aa13.02□□□□□ -0.33
NEK1-205ENST00000510108 FRAT1Q92837 279 aaPredicted RBP13.02□□□□□ -0.33
NEK1-205ENST00000510108 ZNF496Q96IT1 587 aaPredicted RBP13.02□□□□□ -0.33
NEK1-205ENST00000510108 FMNL2Q96PY5 1086 aa13.02□□□□□ -0.33
NEK1-205ENST00000510108 TAOK2Q9UL54 1235 aa13.02□□□□□ -0.33
NEK1-205ENST00000510108 NOB1Q9ULX3 412 aaKnown RBP13.02□□□□□ -0.33
NEK1-205ENST00000510108 ABCC4O15439 1325 aa13.02□□□□□ -0.33
NEK1-205ENST00000510108 PXDNLA1KZ92 1463 aa13.02□□□□□ -0.33
NEK1-205ENST00000510108 TJP1Q07157 1748 aa13.02□□□□□ -0.33
NEK1-205ENST00000510108 CRBNQ96SW2 442 aa13.01□□□□□ -0.33
NEK1-205ENST00000510108 SBF2Q86WG5 1849 aa13.01□□□□□ -0.33
NEK1-205ENST00000510108 ERBB4Q15303 1308 aa13□□□□□ -0.33
NEK1-205ENST00000510108 RLBP1P12271 317 aa13□□□□□ -0.33
NEK1-205ENST00000510108 PSEN1P49768 467 aa13□□□□□ -0.33
NEK1-205ENST00000510108 AAMPQ13685 434 aa13□□□□□ -0.33
NEK1-205ENST00000510108 KRT27Q7Z3Y8 459 aa13□□□□□ -0.33
NEK1-205ENST00000510108 DZIP1LQ8IYY4 767 aaKnown RBP13□□□□□ -0.33
NEK1-205ENST00000510108 EXOC6Q8TAG9 804 aa13□□□□□ -0.33
NEK1-205ENST00000510108 PIGBQ92521 554 aa13□□□□□ -0.33
NEK1-205ENST00000510108 STK31Q9BXU1 1019 aa13□□□□□ -0.33
NEK1-205ENST00000510108 API5Q9BZZ5 524 aaKnown RBP13□□□□□ -0.33
NEK1-205ENST00000510108 PPP4R2Q9NY27 417 aa13□□□□□ -0.33
NEK1-205ENST00000510108 BRWD3Q6RI45 1802 aa12.99□□□□□ -0.33
NEK1-205ENST00000510108 RREB1Q92766 1687 aa12.99□□□□□ -0.33
NEK1-205ENST00000510108 SNRPA1P09661 255 aaKnown RBP12.99□□□□□ -0.33
NEK1-205ENST00000510108 VSIG10Q8N0Z9 540 aa12.99□□□□□ -0.33
NEK1-205ENST00000510108 TNNQ9UQP3 1299 aa12.99□□□□□ -0.33
NEK1-205ENST00000510108 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.98□□□□□ -0.33
NEK1-205ENST00000510108 TIE1P35590 1138 aa12.98□□□□□ -0.33
NEK1-205ENST00000510108 MVPQ14764 893 aaKnown RBP12.98□□□□□ -0.33
NEK1-205ENST00000510108 PANK1Q8TE04 598 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms