RNA–Protein interactions for RNA: ENST00000509854.5

SPOCK3-213, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 5

Gene SPOCK3, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-213ENST00000509854 COL24A1Q17RW2 1714 aa31.38■■■□□ 2.61
SPOCK3-213ENST00000509854 UBR2Q8IWV8 1755 aa31.38■■■□□ 2.61
SPOCK3-213ENST00000509854 NEUROD2Q15784 382 aa31.37■■■□□ 2.61
SPOCK3-213ENST00000509854 PNISRQ8TF01 805 aaKnown RBP31.37■■■□□ 2.61
SPOCK3-213ENST00000509854 GYS1P13807 737 aa31.36■■■□□ 2.61
SPOCK3-213ENST00000509854 CANXP27824 592 aaKnown RBP31.36■■■□□ 2.61
SPOCK3-213ENST00000509854 LMOD3Q0VAK6 560 aa31.36■■■□□ 2.61
SPOCK3-213ENST00000509854 NLGN1Q8N2Q7 840 aa31.36■■■□□ 2.61
SPOCK3-213ENST00000509854 SRP68Q9UHB9 627 aaKnown RBP31.36■■■□□ 2.61
SPOCK3-213ENST00000509854 MYH14Q7Z406 1995 aaKnown RBP31.35■■■□□ 2.61
SPOCK3-213ENST00000509854 USP42Q9H9J4 1324 aaKnown RBP31.33■■■□□ 2.61
SPOCK3-213ENST00000509854 PRAMEF22A3QJZ6 481 aa31.33■■■□□ 2.61
SPOCK3-213ENST00000509854 MMP10P09238 476 aa31.33■■■□□ 2.61
SPOCK3-213ENST00000509854 SNRPA1P09661 255 aaKnown RBP31.33■■■□□ 2.61
SPOCK3-213ENST00000509854 USP16Q9Y5T5 823 aa31.33■■■□□ 2.61
SPOCK3-213ENST00000509854 COL15A1P39059 1388 aa31.31■■■□□ 2.6
SPOCK3-213ENST00000509854 A1BGP04217 495 aa31.31■■■□□ 2.6
SPOCK3-213ENST00000509854 ZPR1O75312 459 aa31.3■■■□□ 2.6
SPOCK3-213ENST00000509854 DCAF8L1A6NGE4 600 aa31.29■■■□□ 2.6
SPOCK3-213ENST00000509854 EIF5P55010 431 aaKnown RBP31.29■■■□□ 2.6
SPOCK3-213ENST00000509854 USPL1Q5W0Q7 1092 aa31.29■■■□□ 2.6
SPOCK3-213ENST00000509854 NLGN2Q8NFZ4 835 aa31.29■■■□□ 2.6
SPOCK3-213ENST00000509854 MRS2Q9HD23 443 aa31.29■■■□□ 2.6
SPOCK3-213ENST00000509854 TRIM35Q9UPQ4 493 aa31.29■■■□□ 2.6
SPOCK3-213ENST00000509854 FKBP8Q14318 412 aa31.28■■■□□ 2.6
SPOCK3-213ENST00000509854 DLG5Q8TDM6 1919 aa31.28■■■□□ 2.6
SPOCK3-213ENST00000509854 EIF4A1P60842 406 aaKnown RBP31.27■■■□□ 2.6
SPOCK3-213ENST00000509854 NARFQ9UHQ1 456 aa31.27■■■□□ 2.6
SPOCK3-213ENST00000509854 TSPYL4Q9UJ04 414 aa31.27■■■□□ 2.6
SPOCK3-213ENST00000509854 CD2APQ9Y5K6 639 aa31.27■■■□□ 2.6
SPOCK3-213ENST00000509854 APAF1O14727 1248 aa31.26■■■□□ 2.59
SPOCK3-213ENST00000509854 ZNF330Q9Y3S2 320 aaPredicted RBP31.26■■■□□ 2.59
SPOCK3-213ENST00000509854 A0A087WZG4 1122 aa31.25■■■□□ 2.59
SPOCK3-213ENST00000509854 IL6STP40189 918 aaPredicted RBP31.25■■■□□ 2.59
SPOCK3-213ENST00000509854 PIP4K2AP48426 406 aaPredicted RBP31.23■■■□□ 2.59
SPOCK3-213ENST00000509854 PARP3Q9Y6F1 533 aa31.23■■■□□ 2.59
SPOCK3-213ENST00000509854 C4AP0C0L4 1744 aa31.22■■■□□ 2.59
SPOCK3-213ENST00000509854 GIGYF1O75420 1035 aaPredicted RBP31.22■■■□□ 2.59
SPOCK3-213ENST00000509854 BABAM1Q9NWV8 329 aa31.22■■■□□ 2.59
SPOCK3-213ENST00000509854 NPM2Q86SE8 214 aaKnown RBP31.21■■■□□ 2.59
SPOCK3-213ENST00000509854 BCL2L12Q9HB09 334 aa31.21■■■□□ 2.59
SPOCK3-213ENST00000509854 TM4SF1P30408 202 aa31.19■■■□□ 2.58
SPOCK3-213ENST00000509854 DDR1Q08345 913 aa31.19■■■□□ 2.58
SPOCK3-213ENST00000509854 TBC1D2BQ9UPU7 963 aa31.19■■■□□ 2.58
SPOCK3-213ENST00000509854 LAS1LQ9Y4W2 734 aaKnown RBP31.18■■■□□ 2.58
SPOCK3-213ENST00000509854 NBPF26B4DH59 902 aa31.17■■■□□ 2.58
SPOCK3-213ENST00000509854 NBPF10Q6P3W6 841 aaKnown RBP31.17■■■□□ 2.58
SPOCK3-213ENST00000509854 NBPF15Q8N660 670 aa31.17■■■□□ 2.58
SPOCK3-213ENST00000509854 CHL1O00533 1208 aa31.16■■■□□ 2.58
SPOCK3-213ENST00000509854 GPR162Q16538 588 aa31.16■■■□□ 2.58
SPOCK3-213ENST00000509854 PELP1Q8IZL8 1130 aaKnown RBP31.16■■■□□ 2.58
SPOCK3-213ENST00000509854 KDM3BQ7LBC6 1761 aa31.15■■■□□ 2.58
SPOCK3-213ENST00000509854 POLRMTO00411 1230 aaKnown RBP31.15■■■□□ 2.58
SPOCK3-213ENST00000509854 NFIXQ14938 502 aa31.15■■■□□ 2.58
SPOCK3-213ENST00000509854 DZIP3Q86Y13 1208 aaKnown RBP31.14■■■□□ 2.58
SPOCK3-213ENST00000509854 CAMTA2O94983 1202 aa31.12■■■□□ 2.57
SPOCK3-213ENST00000509854 BICDL1Q6ZP65 573 aa31.11■■■□□ 2.57
SPOCK3-213ENST00000509854 C10orf71Q711Q0 1435 aa31.11■■■□□ 2.57
SPOCK3-213ENST00000509854 SENP3-EIF4A1A0A087X0R7 540 aa31.1■■■□□ 2.57
SPOCK3-213ENST00000509854 CFAP44Q96MT7 982 aa31.1■■■□□ 2.57
SPOCK3-213ENST00000509854 TBC1D9BQ66K14 1250 aa31.09■■■□□ 2.57
SPOCK3-213ENST00000509854 YBX3P16989 372 aaKnown RBP eCLIP31.07■■■□□ 2.56
SPOCK3-213ENST00000509854 EIF2S2P20042 333 aaKnown RBP31.07■■■□□ 2.56
SPOCK3-213ENST00000509854 TGFB2P61812 414 aa31.07■■■□□ 2.56
SPOCK3-213ENST00000509854 CALD1Q05682 793 aaKnown RBP31.07■■■□□ 2.56
SPOCK3-213ENST00000509854 NGEFQ8N5V2 710 aa31.07■■■□□ 2.56
SPOCK3-213ENST00000509854 SERPINB2P05120 415 aa31.06■■■□□ 2.56
SPOCK3-213ENST00000509854 KRT24Q2M2I5 525 aa31.06■■■□□ 2.56
SPOCK3-213ENST00000509854 WWC3Q9ULE0 1092 aa31.06■■■□□ 2.56
SPOCK3-213ENST00000509854 ZNF853P0CG23 659 aa31.05■■■□□ 2.56
SPOCK3-213ENST00000509854 MYL6BP14649 208 aa31.05■■■□□ 2.56
SPOCK3-213ENST00000509854 MBIPQ9NS73 344 aa31.05■■■□□ 2.56
SPOCK3-213ENST00000509854 PXDNLA1KZ92 1463 aa31.04■■■□□ 2.56
SPOCK3-213ENST00000509854 A0A0G2JLW4 131 aa31.04■■■□□ 2.56
SPOCK3-213ENST00000509854 FAM9BQ8IZU0 186 aa31.04■■■□□ 2.56
SPOCK3-213ENST00000509854 IFT57Q9NWB7 429 aa31.04■■■□□ 2.56
SPOCK3-213ENST00000509854 ERBB4Q15303 1308 aa31.03■■■□□ 2.56
SPOCK3-213ENST00000509854 DPEP1P16444 411 aa31.02■■■□□ 2.56
SPOCK3-213ENST00000509854 GNAI1P63096 354 aa31.02■■■□□ 2.56
SPOCK3-213ENST00000509854 CLEC4GQ6UXB4 293 aa31.02■■■□□ 2.56
SPOCK3-213ENST00000509854 CCDC27Q2M243 656 aa31.01■■■□□ 2.55
SPOCK3-213ENST00000509854 NECTIN2Q92692 538 aa31.01■■■□□ 2.55
SPOCK3-213ENST00000509854 SETDB2Q96T68 719 aa31.01■■■□□ 2.55
SPOCK3-213ENST00000509854 ZNF652Q9Y2D9 606 aa31.01■■■□□ 2.55
SPOCK3-213ENST00000509854 LAMB4A4D0S4 1761 aa31■■■□□ 2.55
SPOCK3-213ENST00000509854 GRIN3BO60391 1043 aa31■■■□□ 2.55
SPOCK3-213ENST00000509854 SCN7AQ01118 1682 aa31■■■□□ 2.55
SPOCK3-213ENST00000509854 PDIA6Q15084 440 aa30.99■■■□□ 2.55
SPOCK3-213ENST00000509854 WWC1Q8IX03 1113 aa30.99■■■□□ 2.55
SPOCK3-213ENST00000509854 CARMIL3Q8ND23 1372 aa30.98■■■□□ 2.55
SPOCK3-213ENST00000509854 YY1P25490 414 aa30.98■■■□□ 2.55
SPOCK3-213ENST00000509854 HLFQ16534 295 aa30.98■■■□□ 2.55
SPOCK3-213ENST00000509854 TTLL7Q6ZT98 887 aa30.98■■■□□ 2.55
SPOCK3-213ENST00000509854 UTRNP46939 3433 aa30.98■■■□□ 2.55
SPOCK3-213ENST00000509854 RGL2O15211 777 aa30.97■■■□□ 2.55
SPOCK3-213ENST00000509854 PROSER3Q2NL68 480 aa30.97■■■□□ 2.55
SPOCK3-213ENST00000509854 NCBP3Q53F19 620 aaKnown RBP30.97■■■□□ 2.55
SPOCK3-213ENST00000509854 KIF6Q6ZMV9 814 aa30.97■■■□□ 2.55
SPOCK3-213ENST00000509854 ANXA1P04083 346 aa30.96■■■□□ 2.55
SPOCK3-213ENST00000509854 HOXB7P09629 217 aa30.96■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms