RNA–Protein interactions for RNA: ENST00000509692.5

SKP2-205, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-205ENST00000509692 VSIG10Q8N0Z9 540 aa21.47■■□□□ 1.03
SKP2-205ENST00000509692 CYP19A1P11511 503 aaPredicted RBP21.47■■□□□ 1.03
SKP2-205ENST00000509692 ARHGEF1Q92888 912 aaKnown RBP21.47■■□□□ 1.03
SKP2-205ENST00000509692 SYT17Q9BSW7 474 aa21.46■■□□□ 1.03
SKP2-205ENST00000509692 THUMPD2Q9BTF0 503 aaKnown RBP21.46■■□□□ 1.03
SKP2-205ENST00000509692 HEG1Q9ULI3 1381 aa21.45■■□□□ 1.02
SKP2-205ENST00000509692 ADRA2BP18089 450 aa21.44■■□□□ 1.02
SKP2-205ENST00000509692 NCBP3Q53F19 620 aaKnown RBP21.44■■□□□ 1.02
SKP2-205ENST00000509692 CCDC87Q9NVE4 849 aa21.44■■□□□ 1.02
SKP2-205ENST00000509692 SALL2Q9Y467 1007 aaPredicted RBP21.44■■□□□ 1.02
SKP2-205ENST00000509692 C4AP0C0L4 1744 aa21.44■■□□□ 1.02
SKP2-205ENST00000509692 TAF7Q15545 349 aaPredicted RBP21.43■■□□□ 1.02
SKP2-205ENST00000509692 CCDC27Q2M243 656 aa21.43■■□□□ 1.02
SKP2-205ENST00000509692 FMNL2Q96PY5 1086 aa21.43■■□□□ 1.02
SKP2-205ENST00000509692 NGEFQ8N5V2 710 aa21.42■■□□□ 1.02
SKP2-205ENST00000509692 MIS18AQ9NYP9 233 aa21.42■■□□□ 1.02
SKP2-205ENST00000509692 ZBTB1Q9Y2K1 713 aa21.42■■□□□ 1.02
SKP2-205ENST00000509692 RFC4P35249 363 aa21.41■■□□□ 1.02
SKP2-205ENST00000509692 WWC1Q8IX03 1113 aa21.4■■□□□ 1.02
SKP2-205ENST00000509692 SOS1Q07889 1333 aaPredicted RBP21.4■■□□□ 1.02
SKP2-205ENST00000509692 KLHL34Q8N239 644 aa21.4■■□□□ 1.02
SKP2-205ENST00000509692 STARD3NLO95772 234 aa21.39■■□□□ 1.01
SKP2-205ENST00000509692 GYS1P13807 737 aa21.39■■□□□ 1.01
SKP2-205ENST00000509692 SRP68Q9UHB9 627 aaKnown RBP21.39■■□□□ 1.01
SKP2-205ENST00000509692 PRAMEF22A3QJZ6 481 aa21.38■■□□□ 1.01
SKP2-205ENST00000509692 TEX13AQ9BXU3 409 aaPredicted RBP21.38■■□□□ 1.01
SKP2-205ENST00000509692 CANXP27824 592 aaKnown RBP21.37■■□□□ 1.01
SKP2-205ENST00000509692 CALD1Q05682 793 aaKnown RBP21.37■■□□□ 1.01
SKP2-205ENST00000509692 KDM3BQ7LBC6 1761 aa21.37■■□□□ 1.01
SKP2-205ENST00000509692 USP42Q9H9J4 1324 aaKnown RBP21.37■■□□□ 1.01
SKP2-205ENST00000509692 USP16Q9Y5T5 823 aa21.37■■□□□ 1.01
SKP2-205ENST00000509692 MMP10P09238 476 aa21.36■■□□□ 1.01
SKP2-205ENST00000509692 HNRNPUQ00839 825 aaKnown RBP eCLIP21.36■■□□□ 1.01
SKP2-205ENST00000509692 NLGN1Q8N2Q7 840 aa21.36■■□□□ 1.01
SKP2-205ENST00000509692 NLGN2Q8NFZ4 835 aa21.36■■□□□ 1.01
SKP2-205ENST00000509692 A1BGP04217 495 aa21.35■■□□□ 1.01
SKP2-205ENST00000509692 LAS1LQ9Y4W2 734 aaKnown RBP21.35■■□□□ 1.01
SKP2-205ENST00000509692 COL15A1P39059 1388 aa21.35■■□□□ 1.01
SKP2-205ENST00000509692 SNRPA1P09661 255 aaKnown RBP21.34■■□□□ 1.01
SKP2-205ENST00000509692 EIF5P55010 431 aaKnown RBP21.34■■□□□ 1.01
SKP2-205ENST00000509692 FKBP8Q14318 412 aa21.34■■□□□ 1.01
SKP2-205ENST00000509692 WDR63Q8IWG1 891 aa21.34■■□□□ 1.01
SKP2-205ENST00000509692 BABAM1Q9NWV8 329 aa21.33■■□□□ 1.01
SKP2-205ENST00000509692 USPL1Q5W0Q7 1092 aa21.33■■□□□ 1
SKP2-205ENST00000509692 CFAP44Q96MT7 982 aa21.33■■□□□ 1
SKP2-205ENST00000509692 TSPYL4Q9UJ04 414 aa21.33■■□□□ 1
SKP2-205ENST00000509692 ZNF521Q96K83 1311 aa21.32■■□□□ 1
SKP2-205ENST00000509692 CHL1O00533 1208 aa21.32■■□□□ 1
SKP2-205ENST00000509692 GNAI1P63096 354 aa21.32■■□□□ 1
SKP2-205ENST00000509692 IFT57Q9NWB7 429 aa21.32■■□□□ 1
SKP2-205ENST00000509692 NARFQ9UHQ1 456 aa21.32■■□□□ 1
SKP2-205ENST00000509692 IL16Q14005 1332 aa21.31■■□□□ 1
SKP2-205ENST00000509692 ZPR1O75312 459 aa21.31■■□□□ 1
SKP2-205ENST00000509692 EIF4A1P60842 406 aaKnown RBP21.31■■□□□ 1
SKP2-205ENST00000509692 CD2APQ9Y5K6 639 aa21.31■■□□□ 1
SKP2-205ENST00000509692 ZNF853P0CG23 659 aa21.3■■□□□ 1
SKP2-205ENST00000509692 IL6STP40189 918 aaPredicted RBP21.3■■□□□ 1
SKP2-205ENST00000509692 PIP4K2AP48426 406 aaPredicted RBP21.3■■□□□ 1
SKP2-205ENST00000509692 BCL2L12Q9HB09 334 aa21.29■■□□□ 1
SKP2-205ENST00000509692 GIGYF1O75420 1035 aaPredicted RBP21.29■■□□□ 1
SKP2-205ENST00000509692 ZNF330Q9Y3S2 320 aaPredicted RBP21.29■■□□□ 1
SKP2-205ENST00000509692 MBIPQ9NS73 344 aa21.28■■□□□ 1
SKP2-205ENST00000509692 LAMB4A4D0S4 1761 aa21.28■■□□□ 1
SKP2-205ENST00000509692 DCAF8L1A6NGE4 600 aa21.27■■□□□ 1
SKP2-205ENST00000509692 TM4SF1P30408 202 aa21.27■■□□□ 1
SKP2-205ENST00000509692 DDR1Q08345 913 aa21.27■■□□□ 1
SKP2-205ENST00000509692 TBC1D2BQ9UPU7 963 aa21.27■■□□□ 1
SKP2-205ENST00000509692 A0A087WZG4 1122 aa21.26■□□□□ 0.99
SKP2-205ENST00000509692 NBPF26B4DH59 902 aa21.26■□□□□ 0.99
SKP2-205ENST00000509692 GOLGA2Q08379 1002 aa21.26■□□□□ 0.99
SKP2-205ENST00000509692 NBPF10Q6P3W6 841 aaKnown RBP21.26■□□□□ 0.99
SKP2-205ENST00000509692 NBPF15Q8N660 670 aa21.26■□□□□ 0.99
SKP2-205ENST00000509692 PARP3Q9Y6F1 533 aa21.26■□□□□ 0.99
SKP2-205ENST00000509692 KIF13BQ9NQT8 1826 aa21.26■□□□□ 0.99
SKP2-205ENST00000509692 SPINK5Q9NQ38 1064 aaPredicted RBP21.26■□□□□ 0.99
SKP2-205ENST00000509692 TSR2Q969E8 191 aaKnown RBP21.25■□□□□ 0.99
SKP2-205ENST00000509692 POLRMTO00411 1230 aaKnown RBP21.24■□□□□ 0.99
SKP2-205ENST00000509692 NFIXQ14938 502 aa21.24■□□□□ 0.99
SKP2-205ENST00000509692 ZBED9Q6R2W3 1325 aa21.24■□□□□ 0.99
SKP2-205ENST00000509692 SCN7AQ01118 1682 aa21.23■□□□□ 0.99
SKP2-205ENST00000509692 C10orf71Q711Q0 1435 aa21.23■□□□□ 0.99
SKP2-205ENST00000509692 GPR162Q16538 588 aa21.22■□□□□ 0.99
SKP2-205ENST00000509692 MYH16Q9H6N6 1097 aa21.22■□□□□ 0.99
SKP2-205ENST00000509692 KIAA1551Q9HCM1 1747 aa21.22■□□□□ 0.99
SKP2-205ENST00000509692 AFDNP55196 1824 aaKnown RBP21.22■□□□□ 0.99
SKP2-205ENST00000509692 CAMTA2O94983 1202 aa21.22■□□□□ 0.99
SKP2-205ENST00000509692 NPM2Q86SE8 214 aaKnown RBP21.22■□□□□ 0.99
SKP2-205ENST00000509692 DZIP3Q86Y13 1208 aaKnown RBP21.22■□□□□ 0.99
SKP2-205ENST00000509692 PELP1Q8IZL8 1130 aaKnown RBP21.22■□□□□ 0.99
SKP2-205ENST00000509692 FANCIQ9NVI1 1328 aa21.22■□□□□ 0.99
SKP2-205ENST00000509692 E9PSI1 815 aa21.21■□□□□ 0.99
SKP2-205ENST00000509692 YBX3P16989 372 aaKnown RBP eCLIP21.21■□□□□ 0.992e-8■■□□□ 12.2
SKP2-205ENST00000509692 CDCA7LQ96GN5 454 aa21.21■□□□□ 0.99
SKP2-205ENST00000509692 YTHDC1Q96MU7 727 aaKnown RBP21.21■□□□□ 0.99
SKP2-205ENST00000509692 BCORQ6W2J9 1755 aa21.2■□□□□ 0.98
SKP2-205ENST00000509692 N4BP2Q86UW6 1770 aaPredicted RBP21.2■□□□□ 0.98
SKP2-205ENST00000509692 SLFN5Q08AF3 891 aa21.2■□□□□ 0.98
SKP2-205ENST00000509692 TBC1D9BQ66K14 1250 aa21.2■□□□□ 0.98
SKP2-205ENST00000509692 KRT24Q2M2I5 525 aa21.19■□□□□ 0.98
SKP2-205ENST00000509692 BICDL1Q6ZP65 573 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms