RNA–Protein interactions for RNA: ENST00000508504.1

TRIM60-203, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM60, Length 1,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-203ENST00000508504 UPF1Q92900 1129 aaKnown RBP eCLIP22.49■■□□□ 1.19
TRIM60-203ENST00000508504 CAMKK2Q96RR4 588 aa22.49■■□□□ 1.19
TRIM60-203ENST00000508504 CHPF2Q9P2E5 772 aa22.49■■□□□ 1.19
TRIM60-203ENST00000508504 TAF1LQ8IZX4 1826 aa22.48■■□□□ 1.19
TRIM60-203ENST00000508504 COL5A3P25940 1745 aaPredicted RBP22.48■■□□□ 1.19
TRIM60-203ENST00000508504 CICQ96RK0 1608 aaPredicted RBP22.48■■□□□ 1.19
TRIM60-203ENST00000508504 RCAN3Q9UKA8 241 aa22.48■■□□□ 1.19
TRIM60-203ENST00000508504 NBPF26B4DH59 902 aa22.47■■□□□ 1.19
TRIM60-203ENST00000508504 CT47B1P0C2W7 299 aaPredicted RBP22.47■■□□□ 1.19
TRIM60-203ENST00000508504 SF3B2Q13435 895 aaKnown RBP22.47■■□□□ 1.19
TRIM60-203ENST00000508504 PDIA6Q15084 440 aa22.47■■□□□ 1.19
TRIM60-203ENST00000508504 NBPF14Q5TI25 921 aa22.47■■□□□ 1.19
TRIM60-203ENST00000508504 NBPF10Q6P3W6 841 aaKnown RBP22.47■■□□□ 1.19
TRIM60-203ENST00000508504 NBPF15Q8N660 670 aa22.47■■□□□ 1.19
TRIM60-203ENST00000508504 SOS1Q07889 1333 aaPredicted RBP22.46■■□□□ 1.19
TRIM60-203ENST00000508504 STARD3NLO95772 234 aa22.46■■□□□ 1.19
TRIM60-203ENST00000508504 CRKLP46109 303 aaKnown RBP22.46■■□□□ 1.19
TRIM60-203ENST00000508504 CCDC30Q5VVM6 783 aa22.46■■□□□ 1.19
TRIM60-203ENST00000508504 TEX13AQ9BXU3 409 aaPredicted RBP22.46■■□□□ 1.19
TRIM60-203ENST00000508504 ZBTB1Q9Y2K1 713 aa22.46■■□□□ 1.19
TRIM60-203ENST00000508504 RGPD3A6NKT7 1758 aaPredicted RBP22.45■■□□□ 1.18
TRIM60-203ENST00000508504 RGPD4Q7Z3J3 1758 aa22.45■■□□□ 1.18
TRIM60-203ENST00000508504 SLC27A3Q5K4L6 730 aa22.45■■□□□ 1.18
TRIM60-203ENST00000508504 INTS5Q6P9B9 1019 aaKnown RBP22.45■■□□□ 1.18
TRIM60-203ENST00000508504 SMIM5Q71RC9 77 aa22.45■■□□□ 1.18
TRIM60-203ENST00000508504 SLC4A2P04920 1241 aa22.44■■□□□ 1.18
TRIM60-203ENST00000508504 MYL6BP14649 208 aa22.44■■□□□ 1.18
TRIM60-203ENST00000508504 SMC4Q9NTJ3 1288 aa22.44■■□□□ 1.18
TRIM60-203ENST00000508504 BAG6P46379 1132 aa22.43■■□□□ 1.18
TRIM60-203ENST00000508504 G2E3Q7L622 706 aa22.43■■□□□ 1.18
TRIM60-203ENST00000508504 LRP10Q7Z4F1 713 aa22.43■■□□□ 1.18
TRIM60-203ENST00000508504 AMIGO3Q86WK7 504 aa22.43■■□□□ 1.18
TRIM60-203ENST00000508504 CCDC125Q86Z20 511 aa22.43■■□□□ 1.18
TRIM60-203ENST00000508504 CANXP27824 592 aaKnown RBP22.42■■□□□ 1.18
TRIM60-203ENST00000508504 MRPL50Q8N5N7 158 aaKnown RBP22.42■■□□□ 1.18
TRIM60-203ENST00000508504 PHAXQ9H814 394 aaKnown RBP22.42■■□□□ 1.18
TRIM60-203ENST00000508504 CENPBP07199 599 aaPredicted RBP22.42■■□□□ 1.18
TRIM60-203ENST00000508504 ALDH1L2Q3SY69 923 aa22.42■■□□□ 1.18
TRIM60-203ENST00000508504 ZNF428Q96B54 188 aa22.42■■□□□ 1.18
TRIM60-203ENST00000508504 DBF4Q9UBU7 674 aaPredicted RBP22.42■■□□□ 1.18
TRIM60-203ENST00000508504 C4BP0C0L5 1744 aa22.41■■□□□ 1.18
TRIM60-203ENST00000508504 STK31Q9BXU1 1019 aa22.41■■□□□ 1.18
TRIM60-203ENST00000508504 DDX21Q9NR30 783 aaKnown RBP eCLIP22.41■■□□□ 1.18
TRIM60-203ENST00000508504 CCDC87Q9NVE4 849 aa22.41■■□□□ 1.18
TRIM60-203ENST00000508504 RREB1Q92766 1687 aa22.39■■□□□ 1.18
TRIM60-203ENST00000508504 ZNF330Q9Y3S2 320 aaPredicted RBP22.39■■□□□ 1.18
TRIM60-203ENST00000508504 CNTNAP4Q9C0A0 1308 aa22.39■■□□□ 1.18
TRIM60-203ENST00000508504 ZNF827Q17R98 1081 aa22.38■■□□□ 1.17
TRIM60-203ENST00000508504 GNPATO15228 680 aa22.37■■□□□ 1.17
TRIM60-203ENST00000508504 PLIN1O60240 522 aa22.37■■□□□ 1.17
TRIM60-203ENST00000508504 ANO8Q9HCE9 1232 aaPredicted RBP22.37■■□□□ 1.17
TRIM60-203ENST00000508504 ERBB4Q15303 1308 aa22.37■■□□□ 1.17
TRIM60-203ENST00000508504 AIMP1Q12904 312 aaKnown RBP22.36■■□□□ 1.17
TRIM60-203ENST00000508504 FRAT1Q92837 279 aaPredicted RBP22.36■■□□□ 1.17
TRIM60-203ENST00000508504 NOB1Q9ULX3 412 aaKnown RBP22.36■■□□□ 1.17
TRIM60-203ENST00000508504 SUPT16HQ9Y5B9 1047 aaKnown RBP22.36■■□□□ 1.17
TRIM60-203ENST00000508504 CACNA1FO60840 1977 aa22.36■■□□□ 1.17
TRIM60-203ENST00000508504 NUP188Q5SRE5 1749 aa22.36■■□□□ 1.17
TRIM60-203ENST00000508504 FLIIQ13045 1269 aa22.36■■□□□ 1.17
TRIM60-203ENST00000508504 RC3H1Q5TC82 1133 aaKnown RBP22.36■■□□□ 1.17
TRIM60-203ENST00000508504 XAGE3Q8WTP9 111 aa22.36■■□□□ 1.17
TRIM60-203ENST00000508504 TNNQ9UQP3 1299 aa22.36■■□□□ 1.17
TRIM60-203ENST00000508504 EIF5P55010 431 aaKnown RBP22.35■■□□□ 1.17
TRIM60-203ENST00000508504 TTLL7Q6ZT98 887 aa22.35■■□□□ 1.17
TRIM60-203ENST00000508504 COPS6Q7L5N1 327 aa22.35■■□□□ 1.17
TRIM60-203ENST00000508504 HYPKQ9NX55 129 aa22.35■■□□□ 1.17
TRIM60-203ENST00000508504 BRPF1P55201 1214 aaPredicted RBP22.34■■□□□ 1.17
TRIM60-203ENST00000508504 AKT1S1Q96B36 256 aa22.34■■□□□ 1.17
TRIM60-203ENST00000508504 AK7Q96M32 723 aa22.34■■□□□ 1.17
TRIM60-203ENST00000508504 CHMP4AQ9BY43 222 aa22.34■■□□□ 1.17
TRIM60-203ENST00000508504 UBR3Q6ZT12 1888 aa22.34■■□□□ 1.17
TRIM60-203ENST00000508504 IL6STP40189 918 aaPredicted RBP22.33■■□□□ 1.17
TRIM60-203ENST00000508504 PHF14O94880 888 aa22.33■■□□□ 1.16
TRIM60-203ENST00000508504 RPS6KA4O75676 772 aa22.32■■□□□ 1.16
TRIM60-203ENST00000508504 TUBGCP6Q96RT7 1819 aa22.31■■□□□ 1.16
TRIM60-203ENST00000508504 FKBP5Q13451 457 aaPredicted RBP22.31■■□□□ 1.16
TRIM60-203ENST00000508504 ARXQ96QS3 562 aa22.31■■□□□ 1.16
TRIM60-203ENST00000508504 TBC1D2BQ9UPU7 963 aa22.31■■□□□ 1.16
TRIM60-203ENST00000508504 COL15A1P39059 1388 aa22.3■■□□□ 1.16
TRIM60-203ENST00000508504 KIF16BQ96L93 1317 aa22.3■■□□□ 1.16
TRIM60-203ENST00000508504 F6X3S4 739 aa22.3■■□□□ 1.16
TRIM60-203ENST00000508504 RTCBQ9Y3I0 505 aaKnown RBP22.3■■□□□ 1.16
TRIM60-203ENST00000508504 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.3■■□□□ 1.16
TRIM60-203ENST00000508504 TRIM27P14373 513 aa22.3■■□□□ 1.16
TRIM60-203ENST00000508504 TFCP2L1Q9NZI6 479 aa22.3■■□□□ 1.16
TRIM60-203ENST00000508504 ADCY9O60503 1353 aa22.29■■□□□ 1.16
TRIM60-203ENST00000508504 PI4KAP2A4QPH2 592 aa22.29■■□□□ 1.16
TRIM60-203ENST00000508504 RRP1P56182 461 aaKnown RBP22.29■■□□□ 1.16
TRIM60-203ENST00000508504 C20orf194Q5TEA3 1177 aa22.29■■□□□ 1.16
TRIM60-203ENST00000508504 PI4KAP1Q8N8J0 262 aa22.29■■□□□ 1.16
TRIM60-203ENST00000508504 ARHGEF1Q92888 912 aaKnown RBP22.29■■□□□ 1.16
TRIM60-203ENST00000508504 CLUAP1Q96AJ1 413 aa22.29■■□□□ 1.16
TRIM60-203ENST00000508504 RNF123Q5XPI4 1314 aa22.28■■□□□ 1.16
TRIM60-203ENST00000508504 ZBTB3Q9H5J0 574 aa22.28■■□□□ 1.16
TRIM60-203ENST00000508504 DZIP3Q86Y13 1208 aaKnown RBP22.27■■□□□ 1.16
TRIM60-203ENST00000508504 C4AP0C0L4 1744 aa22.27■■□□□ 1.16
TRIM60-203ENST00000508504 RLBP1P12271 317 aa22.26■■□□□ 1.15
TRIM60-203ENST00000508504 SLC15A2Q16348 729 aa22.26■■□□□ 1.15
TRIM60-203ENST00000508504 ZKSCAN2Q63HK3 967 aa22.26■■□□□ 1.15
TRIM60-203ENST00000508504 ATF7IPQ6VMQ6 1270 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms