RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 SND1Q7KZF4 910 aaKnown RBP eCLIP3.2□□□□□ -1.9
SMN2-208ENST00000508258 TXNDC2Q86VQ3 553 aa3.2□□□□□ -1.9
SMN2-208ENST00000508258 WHAMMQ8TF30 809 aa3.2□□□□□ -1.9
SMN2-208ENST00000508258 XAGE2Q96GT9 111 aa3.2□□□□□ -1.9
SMN2-208ENST00000508258 GMCL1Q96IK5 515 aa3.2□□□□□ -1.9
SMN2-208ENST00000508258 RUBCNLQ9H714 662 aa3.2□□□□□ -1.9
SMN2-208ENST00000508258 MBIPQ9NS73 344 aa3.2□□□□□ -1.9
SMN2-208ENST00000508258 SLAIN2Q9P270 581 aa3.2□□□□□ -1.9
SMN2-208ENST00000508258 MKRN1Q9UHC7 482 aaKnown RBP3.2□□□□□ -1.9
SMN2-208ENST00000508258 NOVA2Q9UNW9 492 aaKnown RBP3.2□□□□□ -1.9
SMN2-208ENST00000508258 NSFL1CQ9UNZ2 370 aaKnown RBP3.2□□□□□ -1.9
SMN2-208ENST00000508258 ADAMTS8Q9UP79 889 aa3.2□□□□□ -1.9
SMN2-208ENST00000508258 USP17L15C9J2P7 530 aa3.19□□□□□ -1.9
SMN2-208ENST00000508258 USP17L10C9JJH3 530 aa3.19□□□□□ -1.9
SMN2-208ENST00000508258 USP17L13C9JLJ4 530 aa3.19□□□□□ -1.9
SMN2-208ENST00000508258 USP17L12C9JPN9 530 aa3.19□□□□□ -1.9
SMN2-208ENST00000508258 USP17L11C9JVI0 530 aa3.19□□□□□ -1.9
SMN2-208ENST00000508258 USP17L21D6R901 530 aa3.19□□□□□ -1.9
SMN2-208ENST00000508258 USP17L18D6R9N7 530 aa3.19□□□□□ -1.9
SMN2-208ENST00000508258 USP17L22D6RA61 530 aa3.19□□□□□ -1.9
SMN2-208ENST00000508258 USP17L17D6RBQ6 530 aa3.19□□□□□ -1.9
SMN2-208ENST00000508258 USP17L19D6RCP7 530 aa3.19□□□□□ -1.9
SMN2-208ENST00000508258 USP17L20D6RJB6 530 aa3.19□□□□□ -1.9
SMN2-208ENST00000508258 DKK1O94907 266 aa3.19□□□□□ -1.9
SMN2-208ENST00000508258 INHAP05111 366 aa3.19□□□□□ -1.9
SMN2-208ENST00000508258 SLURP2P0DP57 97 aa3.19□□□□□ -1.9
SMN2-208ENST00000508258 SSFA2P28290 1259 aa3.19□□□□□ -1.9
SMN2-208ENST00000508258 SRSF11Q05519 484 aaKnown RBP3.19□□□□□ -1.9
SMN2-208ENST00000508258 USP17L24Q0WX57 530 aa3.19□□□□□ -1.9
SMN2-208ENST00000508258 NCOA4Q13772 614 aa3.19□□□□□ -1.9
SMN2-208ENST00000508258 C4orf17Q53FE4 359 aa3.19□□□□□ -1.9
SMN2-208ENST00000508258 WDR44Q5JSH3 913 aa3.19□□□□□ -1.9
SMN2-208ENST00000508258 EFHC2Q5JST6 749 aa3.19□□□□□ -1.9
SMN2-208ENST00000508258 B4GALNT3Q6L9W6 998 aa3.19□□□□□ -1.9
SMN2-208ENST00000508258 LYPD4Q6UWN0 246 aa3.19□□□□□ -1.9
SMN2-208ENST00000508258 DEPDC4Q8N2C3 294 aa3.19□□□□□ -1.9
SMN2-208ENST00000508258 NEDD1Q8NHV4 660 aa3.19□□□□□ -1.9
SMN2-208ENST00000508258 RHBDD1Q8TEB9 315 aa3.19□□□□□ -1.9
SMN2-208ENST00000508258 CLP1Q92989 425 aaKnown RBP3.19□□□□□ -1.9
SMN2-208ENST00000508258 FHDC1Q9C0D6 1143 aaPredicted RBP3.19□□□□□ -1.9
SMN2-208ENST00000508258 ENAMQ9NRM1 1142 aa3.19□□□□□ -1.9
SMN2-208ENST00000508258 NOD1Q9Y239 953 aa3.19□□□□□ -1.9
SMN2-208ENST00000508258 IGF1RP08069 1367 aa3.19□□□□□ -1.9
SMN2-208ENST00000508258 GDF11O95390 407 aa3.18□□□□□ -1.9
SMN2-208ENST00000508258 RASA1P20936 1047 aa3.18□□□□□ -1.9
SMN2-208ENST00000508258 MSX1P28360 303 aa3.18□□□□□ -1.9
SMN2-208ENST00000508258 IRS1P35568 1242 aa3.18□□□□□ -1.9
SMN2-208ENST00000508258 GTF2IP78347 998 aa3.18□□□□□ -1.9
SMN2-208ENST00000508258 CLDN10P78369 228 aa3.18□□□□□ -1.9
SMN2-208ENST00000508258 CCDC27Q2M243 656 aa3.18□□□□□ -1.9
SMN2-208ENST00000508258 ARSJQ5FYB0 599 aaPredicted RBP3.18□□□□□ -1.9
SMN2-208ENST00000508258 LARP1Q6PKG0 1096 aaKnown RBP3.18□□□□□ -1.9
SMN2-208ENST00000508258 PPARGC1BQ86YN6 1023 aaKnown RBP3.18□□□□□ -1.9
SMN2-208ENST00000508258 ANKMY2Q8IV38 441 aa3.18□□□□□ -1.9
SMN2-208ENST00000508258 TMEM151AQ8N4L1 468 aa3.18□□□□□ -1.9
SMN2-208ENST00000508258 FAM200AQ8TCP9 573 aa3.18□□□□□ -1.9
SMN2-208ENST00000508258 FOXD4L4Q8WXT5 416 aaPredicted RBP3.18□□□□□ -1.9
SMN2-208ENST00000508258 NIFKQ9BYG3 293 aaKnown RBP3.18□□□□□ -1.9
SMN2-208ENST00000508258 PHF24Q9UPV7 400 aa3.18□□□□□ -1.9
SMN2-208ENST00000508258 AMOTL2Q9Y2J4 779 aa3.18□□□□□ -1.9
SMN2-208ENST00000508258 GJA3Q9Y6H8 435 aa3.18□□□□□ -1.9
SMN2-208ENST00000508258 ZBTB7BO15156 539 aaPredicted RBP3.17□□□□□ -1.9
SMN2-208ENST00000508258 CELA2BP08218 269 aaPredicted RBP3.17□□□□□ -1.9
SMN2-208ENST00000508258 BCRP11274 1271 aa3.17□□□□□ -1.9
SMN2-208ENST00000508258 BMP4P12644 408 aa3.17□□□□□ -1.9
SMN2-208ENST00000508258 SCNN1DP51172 638 aa3.17□□□□□ -1.9
SMN2-208ENST00000508258 SMTNP53814 917 aa3.17□□□□□ -1.9
SMN2-208ENST00000508258 SWI5Q1ZZU3 235 aa3.17□□□□□ -1.9
SMN2-208ENST00000508258 NBPF1Q3BBV0 1214 aa3.17□□□□□ -1.9
SMN2-208ENST00000508258 BICDL1Q6ZP65 573 aa3.17□□□□□ -1.9
SMN2-208ENST00000508258 PODNQ7Z5L7 613 aa3.17□□□□□ -1.9
SMN2-208ENST00000508258 SIX5Q8N196 739 aa3.17□□□□□ -1.9
SMN2-208ENST00000508258 LARGE2Q8N3Y3 721 aa3.17□□□□□ -1.9
SMN2-208ENST00000508258 OGFOD1Q8N543 542 aa3.17□□□□□ -1.9
SMN2-208ENST00000508258 CCER1Q8TC90 406 aaPredicted RBP3.17□□□□□ -1.9
SMN2-208ENST00000508258 SCARF2Q96GP6 870 aaPredicted RBP3.17□□□□□ -1.9
SMN2-208ENST00000508258 RRAGCQ9HB90 399 aa3.17□□□□□ -1.9
SMN2-208ENST00000508258 CABP1Q9NZU7 370 aa3.17□□□□□ -1.9
SMN2-208ENST00000508258 DCDC2BA2VCK2 349 aa3.16□□□□□ -1.9
SMN2-208ENST00000508258 A6NJY4 79 aa3.16□□□□□ -1.9
SMN2-208ENST00000508258 BACH1O14867 736 aa3.16□□□□□ -1.9
SMN2-208ENST00000508258 ARHGEF15O94989 841 aa3.16□□□□□ -1.9
SMN2-208ENST00000508258 TATP17735 454 aaPredicted RBP3.16□□□□□ -1.9
SMN2-208ENST00000508258 AMPD1P23109 780 aa3.16□□□□□ -1.9
SMN2-208ENST00000508258 ARID4AP29374 1257 aaPredicted RBP3.16□□□□□ -1.9
SMN2-208ENST00000508258 MAP2K3P46734 347 aa3.16□□□□□ -1.9
SMN2-208ENST00000508258 ATP1A2P50993 1020 aa3.16□□□□□ -1.9
SMN2-208ENST00000508258 RASSF7Q02833 373 aa3.16□□□□□ -1.9
SMN2-208ENST00000508258 KCNMA1Q12791 1236 aa3.16□□□□□ -1.9
SMN2-208ENST00000508258 DPYDQ12882 1025 aa3.16□□□□□ -1.9
SMN2-208ENST00000508258 FIGNL1Q6PIW4 674 aa3.16□□□□□ -1.9
SMN2-208ENST00000508258 TRIM50Q86XT4 487 aa3.16□□□□□ -1.9
SMN2-208ENST00000508258 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.16□□□□□ -1.9
SMN2-208ENST00000508258 C1orf216Q8TAB5 229 aa3.16□□□□□ -1.9
SMN2-208ENST00000508258 ZNF428Q96B54 188 aa3.16□□□□□ -1.9
SMN2-208ENST00000508258 ABHD17AQ96GS6 310 aa3.16□□□□□ -1.9
SMN2-208ENST00000508258 CFHR5Q9BXR6 569 aa3.16□□□□□ -1.9
SMN2-208ENST00000508258 NEUROD4Q9HD90 331 aa3.16□□□□□ -1.9
SMN2-208ENST00000508258 DNAAF2Q9NVR5 837 aaKnown RBP3.16□□□□□ -1.9
SMN2-208ENST00000508258 ZNF232Q9UNY5 417 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms