RNA–Protein interactions for RNA: ENST00000508006.1

SNCB-204, Transcript of synuclein beta, humanhuman

TSL 2

Gene SNCB, Length 969 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-204ENST00000508006 ATG3Q9NT62 314 aa29.24■■■□□ 2.27
SNCB-204ENST00000508006 CEP350Q5VT06 3117 aa29.24■■■□□ 2.27
SNCB-204ENST00000508006 UBR2Q8IWV8 1755 aa29.24■■■□□ 2.27
SNCB-204ENST00000508006 TRAPPC3LQ5T215 181 aa29.23■■■□□ 2.27
SNCB-204ENST00000508006 RBM42Q9BTD8 480 aaKnown RBP29.22■■■□□ 2.27
SNCB-204ENST00000508006 RTCBQ9Y3I0 505 aaKnown RBP29.22■■■□□ 2.27
SNCB-204ENST00000508006 KDM3BQ7LBC6 1761 aa29.21■■■□□ 2.27
SNCB-204ENST00000508006 MMP10P09238 476 aa29.21■■■□□ 2.27
SNCB-204ENST00000508006 WWC1Q8IX03 1113 aa29.21■■■□□ 2.27
SNCB-204ENST00000508006 BTBD11A6QL63 1104 aa29.2■■■□□ 2.26
SNCB-204ENST00000508006 THUMPD2Q9BTF0 503 aaKnown RBP29.19■■■□□ 2.26
SNCB-204ENST00000508006 CICQ96RK0 1608 aaPredicted RBP29.19■■■□□ 2.26
SNCB-204ENST00000508006 ADCY9O60503 1353 aa29.18■■■□□ 2.26
SNCB-204ENST00000508006 NLGN1Q8N2Q7 840 aa29.18■■■□□ 2.26
SNCB-204ENST00000508006 ZNF790Q6PG37 636 aa29.17■■■□□ 2.26
SNCB-204ENST00000508006 WDR63Q8IWG1 891 aa29.17■■■□□ 2.26
SNCB-204ENST00000508006 TTC5Q8N0Z6 440 aa29.17■■■□□ 2.26
SNCB-204ENST00000508006 IL16Q14005 1332 aa29.17■■■□□ 2.26
SNCB-204ENST00000508006 HSPA6P17066 643 aa29.16■■■□□ 2.26
SNCB-204ENST00000508006 CFAP44Q96MT7 982 aa29.15■■■□□ 2.26
SNCB-204ENST00000508006 KCPQ6ZWJ8 1503 aa29.15■■■□□ 2.26
SNCB-204ENST00000508006 TGFB2P61812 414 aa29.14■■■□□ 2.26
SNCB-204ENST00000508006 IFT57Q9NWB7 429 aa29.14■■■□□ 2.26
SNCB-204ENST00000508006 BCS1LQ9Y276 419 aa29.14■■■□□ 2.26
SNCB-204ENST00000508006 RFC4P35249 363 aa29.13■■■□□ 2.25
SNCB-204ENST00000508006 GNAI1P63096 354 aa29.13■■■□□ 2.25
SNCB-204ENST00000508006 IFFO2Q5TF58 517 aa29.13■■■□□ 2.25
SNCB-204ENST00000508006 CHL1O00533 1208 aa29.12■■■□□ 2.25
SNCB-204ENST00000508006 SLC39A6Q13433 755 aa29.12■■■□□ 2.25
SNCB-204ENST00000508006 VSIG10Q8N0Z9 540 aa29.12■■■□□ 2.25
SNCB-204ENST00000508006 ARHGEF1Q92888 912 aaKnown RBP29.12■■■□□ 2.25
SNCB-204ENST00000508006 ZNF521Q96K83 1311 aa29.12■■■□□ 2.25
SNCB-204ENST00000508006 A0A0G2JLW4 131 aa29.11■■■□□ 2.25
SNCB-204ENST00000508006 ZNF853P0CG23 659 aa29.11■■■□□ 2.25
SNCB-204ENST00000508006 ADRA2BP18089 450 aa29.11■■■□□ 2.25
SNCB-204ENST00000508006 RC3H1Q5TC82 1133 aaKnown RBP29.11■■■□□ 2.25
SNCB-204ENST00000508006 CCDC87Q9NVE4 849 aa29.11■■■□□ 2.25
SNCB-204ENST00000508006 SLC4A9Q96Q91 983 aa29.1■■■□□ 2.25
SNCB-204ENST00000508006 TSPYL4Q9UJ04 414 aa29.1■■■□□ 2.25
SNCB-204ENST00000508006 SALL2Q9Y467 1007 aaPredicted RBP29.1■■■□□ 2.25
SNCB-204ENST00000508006 PARP3Q9Y6F1 533 aa29.1■■■□□ 2.25
SNCB-204ENST00000508006 ARHGAP27Q6ZUM4 889 aa29.09■■■□□ 2.25
SNCB-204ENST00000508006 FMNL2Q96PY5 1086 aa29.09■■■□□ 2.25
SNCB-204ENST00000508006 RPS6KA4O75676 772 aa29.08■■■□□ 2.25
SNCB-204ENST00000508006 PTCD1O75127 700 aaKnown RBP29.07■■■□□ 2.24
SNCB-204ENST00000508006 COL5A3P25940 1745 aaPredicted RBP29.07■■■□□ 2.24
SNCB-204ENST00000508006 TJP1Q07157 1748 aa29.07■■■□□ 2.24
SNCB-204ENST00000508006 PXDNLA1KZ92 1463 aa29.06■■■□□ 2.24
SNCB-204ENST00000508006 HEG1Q9ULI3 1381 aa29.06■■■□□ 2.24
SNCB-204ENST00000508006 CNTNAP4Q9C0A0 1308 aa29.06■■■□□ 2.24
SNCB-204ENST00000508006 ZNF496Q96IT1 587 aaPredicted RBP29.06■■■□□ 2.24
SNCB-204ENST00000508006 MIS18AQ9NYP9 233 aa29.06■■■□□ 2.24
SNCB-204ENST00000508006 N4BP2Q86UW6 1770 aaPredicted RBP29.06■■■□□ 2.24
SNCB-204ENST00000508006 KIF3CO14782 793 aa29.05■■■□□ 2.24
SNCB-204ENST00000508006 GYS1P13807 737 aa29.05■■■□□ 2.24
SNCB-204ENST00000508006 HNRNPUQ00839 825 aaKnown RBP eCLIP29.05■■■□□ 2.24
SNCB-204ENST00000508006 TEX13AQ9BXU3 409 aaPredicted RBP29.05■■■□□ 2.24
SNCB-204ENST00000508006 LAS1LQ9Y4W2 734 aaKnown RBP29.05■■■□□ 2.24
SNCB-204ENST00000508006 DPEP1P16444 411 aa29.04■■■□□ 2.24
SNCB-204ENST00000508006 KCNQ3O43525 872 aa29.03■■■□□ 2.24
SNCB-204ENST00000508006 EIF4A1P60842 406 aaKnown RBP29.03■■■□□ 2.24
SNCB-204ENST00000508006 KIF13BQ9NQT8 1826 aa29.02■■■□□ 2.24
SNCB-204ENST00000508006 GOLGA2Q08379 1002 aa29.02■■■□□ 2.24
SNCB-204ENST00000508006 MBIPQ9NS73 344 aa29.02■■■□□ 2.24
SNCB-204ENST00000508006 LAMB4A4D0S4 1761 aa29.02■■■□□ 2.24
SNCB-204ENST00000508006 SNRPA1P09661 255 aaKnown RBP29.01■■■□□ 2.23
SNCB-204ENST00000508006 MYH16Q9H6N6 1097 aa29■■■□□ 2.23
SNCB-204ENST00000508006 C10orf71Q711Q0 1435 aa28.99■■■□□ 2.23
SNCB-204ENST00000508006 ZBED9Q6R2W3 1325 aa28.98■■■□□ 2.23
SNCB-204ENST00000508006 CRKLP46109 303 aaKnown RBP28.98■■■□□ 2.23
SNCB-204ENST00000508006 E9PSI1 815 aa28.97■■■□□ 2.23
SNCB-204ENST00000508006 TOMM70O94826 608 aa28.97■■■□□ 2.23
SNCB-204ENST00000508006 PIM2Q9P1W9 311 aa28.97■■■□□ 2.23
SNCB-204ENST00000508006 C4AP0C0L4 1744 aa28.97■■■□□ 2.23
SNCB-204ENST00000508006 SOS1Q07889 1333 aaPredicted RBP28.96■■■□□ 2.23
SNCB-204ENST00000508006 STARD3NLO95772 234 aa28.96■■■□□ 2.23
SNCB-204ENST00000508006 HOXB7P09629 217 aa28.96■■■□□ 2.23
SNCB-204ENST00000508006 APLP1P51693 650 aa28.96■■■□□ 2.23
SNCB-204ENST00000508006 MYH14Q7Z406 1995 aaKnown RBP28.95■■■□□ 2.23
SNCB-204ENST00000508006 KIAA1551Q9HCM1 1747 aa28.94■■■□□ 2.22
SNCB-204ENST00000508006 DNAJC10Q8IXB1 793 aa28.94■■■□□ 2.22
SNCB-204ENST00000508006 SRP68Q9UHB9 627 aaKnown RBP28.94■■■□□ 2.22
SNCB-204ENST00000508006 FANCIQ9NVI1 1328 aa28.94■■■□□ 2.22
SNCB-204ENST00000508006 CYP19A1P11511 503 aaPredicted RBP28.93■■■□□ 2.22
SNCB-204ENST00000508006 CHMP4AQ9BY43 222 aa28.93■■■□□ 2.22
SNCB-204ENST00000508006 KCNA3P22001 575 aa28.92■■■□□ 2.22
SNCB-204ENST00000508006 SLFN5Q08AF3 891 aa28.92■■■□□ 2.22
SNCB-204ENST00000508006 FKBP8Q14318 412 aa28.92■■■□□ 2.22
SNCB-204ENST00000508006 DALRD3Q5D0E6 543 aaKnown RBP28.92■■■□□ 2.22
SNCB-204ENST00000508006 C9orf131Q5VYM1 1079 aa28.92■■■□□ 2.22
SNCB-204ENST00000508006 C16orf71Q8IYS4 520 aaPredicted RBP28.92■■■□□ 2.22
SNCB-204ENST00000508006 TSR2Q969E8 191 aaKnown RBP28.92■■■□□ 2.22
SNCB-204ENST00000508006 SPINK5Q9NQ38 1064 aaPredicted RBP28.92■■■□□ 2.22
SNCB-204ENST00000508006 NMRK2Q9NPI5 230 aa28.91■■■□□ 2.22
SNCB-204ENST00000508006 ZPR1O75312 459 aa28.9■■■□□ 2.22
SNCB-204ENST00000508006 TRMT2AQ8IZ69 625 aaKnown RBP28.9■■■□□ 2.22
SNCB-204ENST00000508006 USP42Q9H9J4 1324 aaKnown RBP28.9■■■□□ 2.22
SNCB-204ENST00000508006 USP16Q9Y5T5 823 aa28.89■■■□□ 2.22
SNCB-204ENST00000508006 DUSP27Q5VZP5 1158 aa28.87■■■□□ 2.21
SNCB-204ENST00000508006 ERBB4Q15303 1308 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms