RNA–Protein interactions for RNA: ENST00000507902.5

PTPN13-206, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 4

Gene PTPN13, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-206ENST00000507902 LAMB4A4D0S4 1761 aa18.14■□□□□ 0.5
PTPN13-206ENST00000507902 INTS5Q6P9B9 1019 aaKnown RBP18.14■□□□□ 0.49
PTPN13-206ENST00000507902 THUMPD2Q9BTF0 503 aaKnown RBP18.14■□□□□ 0.49
PTPN13-206ENST00000507902 CCDC184Q52MB2 194 aa18.13■□□□□ 0.49
PTPN13-206ENST00000507902 AMIGO3Q86WK7 504 aa18.13■□□□□ 0.49
PTPN13-206ENST00000507902 TSPYL4Q9UJ04 414 aa18.13■□□□□ 0.49
PTPN13-206ENST00000507902 SOS1Q07889 1333 aaPredicted RBP18.13■□□□□ 0.49
PTPN13-206ENST00000507902 COL15A1P39059 1388 aa18.13■□□□□ 0.49
PTPN13-206ENST00000507902 A0A087WZG4 1122 aa18.12■□□□□ 0.49
PTPN13-206ENST00000507902 APAF1O14727 1248 aa18.12■□□□□ 0.49
PTPN13-206ENST00000507902 NLGN1Q8N2Q7 840 aa18.12■□□□□ 0.49
PTPN13-206ENST00000507902 ARHGEF1Q92888 912 aaKnown RBP18.12■□□□□ 0.49
PTPN13-206ENST00000507902 KCNQ3O43525 872 aa18.11■□□□□ 0.49
PTPN13-206ENST00000507902 ZPR1O75312 459 aa18.11■□□□□ 0.49
PTPN13-206ENST00000507902 MSL1Q68DK7 614 aa18.11■□□□□ 0.49
PTPN13-206ENST00000507902 TRIM35Q9UPQ4 493 aa18.11■□□□□ 0.49
PTPN13-206ENST00000507902 ZBTB1Q9Y2K1 713 aa18.11■□□□□ 0.49
PTPN13-206ENST00000507902 USP42Q9H9J4 1324 aaKnown RBP18.1■□□□□ 0.49
PTPN13-206ENST00000507902 IL6STP40189 918 aaPredicted RBP18.1■□□□□ 0.49
PTPN13-206ENST00000507902 NCBP3Q53F19 620 aaKnown RBP18.1■□□□□ 0.49
PTPN13-206ENST00000507902 MIS18AQ9NYP9 233 aa18.1■□□□□ 0.49
PTPN13-206ENST00000507902 CANXP27824 592 aaKnown RBP18.09■□□□□ 0.49
PTPN13-206ENST00000507902 EIF4A1P60842 406 aaKnown RBP18.09■□□□□ 0.49
PTPN13-206ENST00000507902 DCAF8L1A6NGE4 600 aa18.08■□□□□ 0.48
PTPN13-206ENST00000507902 GIGYF1O75420 1035 aaPredicted RBP18.07■□□□□ 0.48
PTPN13-206ENST00000507902 CCDC27Q2M243 656 aa18.07■□□□□ 0.48
PTPN13-206ENST00000507902 SMIM5Q71RC9 77 aa18.07■□□□□ 0.48
PTPN13-206ENST00000507902 NGEFQ8N5V2 710 aa18.07■□□□□ 0.48
PTPN13-206ENST00000507902 CFAP44Q96MT7 982 aa18.07■□□□□ 0.48
PTPN13-206ENST00000507902 FHDC1Q9C0D6 1143 aaPredicted RBP18.07■□□□□ 0.48
PTPN13-206ENST00000507902 NARFQ9UHQ1 456 aa18.07■□□□□ 0.48
PTPN13-206ENST00000507902 CHL1O00533 1208 aa18.06■□□□□ 0.48
PTPN13-206ENST00000507902 GYS1P13807 737 aa18.06■□□□□ 0.48
PTPN13-206ENST00000507902 EIF5P55010 431 aaKnown RBP18.06■□□□□ 0.48
PTPN13-206ENST00000507902 USP16Q9Y5T5 823 aa18.06■□□□□ 0.48
PTPN13-206ENST00000507902 SCN7AQ01118 1682 aa18.06■□□□□ 0.48
PTPN13-206ENST00000507902 ERBB4Q15303 1308 aa18.05■□□□□ 0.48
PTPN13-206ENST00000507902 CCER2I3L3R5 266 aa18.05■□□□□ 0.48
PTPN13-206ENST00000507902 MMP10P09238 476 aa18.05■□□□□ 0.48
PTPN13-206ENST00000507902 GNAI1P63096 354 aa18.05■□□□□ 0.48
PTPN13-206ENST00000507902 KLHL34Q8N239 644 aa18.05■□□□□ 0.48
PTPN13-206ENST00000507902 IFT57Q9NWB7 429 aa18.05■□□□□ 0.48
PTPN13-206ENST00000507902 ZNF330Q9Y3S2 320 aaPredicted RBP18.05■□□□□ 0.48
PTPN13-206ENST00000507902 LAS1LQ9Y4W2 734 aaKnown RBP18.05■□□□□ 0.48
PTPN13-206ENST00000507902 A1BGP04217 495 aa18.04■□□□□ 0.48
PTPN13-206ENST00000507902 FAM9BQ8IZU0 186 aa18.04■□□□□ 0.48
PTPN13-206ENST00000507902 SYT17Q9BSW7 474 aa18.04■□□□□ 0.48
PTPN13-206ENST00000507902 CD2APQ9Y5K6 639 aa18.04■□□□□ 0.48
PTPN13-206ENST00000507902 HOXB7P09629 217 aa18.03■□□□□ 0.48
PTPN13-206ENST00000507902 USPL1Q5W0Q7 1092 aa18.03■□□□□ 0.48
PTPN13-206ENST00000507902 PARP3Q9Y6F1 533 aa18.03■□□□□ 0.48
PTPN13-206ENST00000507902 PRAMEF22A3QJZ6 481 aa18.02■□□□□ 0.48
PTPN13-206ENST00000507902 RGL2O15211 777 aa18.02■□□□□ 0.48
PTPN13-206ENST00000507902 DIEXFQ68CQ4 756 aaKnown RBP18.02■□□□□ 0.48
PTPN13-206ENST00000507902 CHMP4AQ9BY43 222 aa18.02■□□□□ 0.48
PTPN13-206ENST00000507902 SRP68Q9UHB9 627 aaKnown RBP18.02■□□□□ 0.48
PTPN13-206ENST00000507902 ZNF652Q9Y2D9 606 aa18.02■□□□□ 0.48
PTPN13-206ENST00000507902 BCORQ6W2J9 1755 aa18.02■□□□□ 0.47
PTPN13-206ENST00000507902 FKBP8Q14318 412 aa18■□□□□ 0.47
PTPN13-206ENST00000507902 DZIP3Q86Y13 1208 aaKnown RBP18■□□□□ 0.47
PTPN13-206ENST00000507902 WWC1Q8IX03 1113 aa18■□□□□ 0.47
PTPN13-206ENST00000507902 IL16Q14005 1332 aa17.99■□□□□ 0.47
PTPN13-206ENST00000507902 ZNF853P0CG23 659 aa17.99■□□□□ 0.47
PTPN13-206ENST00000507902 MBIPQ9NS73 344 aa17.99■□□□□ 0.47
PTPN13-206ENST00000507902 CLEC4GQ6UXB4 293 aa17.98■□□□□ 0.47
PTPN13-206ENST00000507902 KIF6Q6ZMV9 814 aa17.98■□□□□ 0.47
PTPN13-206ENST00000507902 TBC1D2BQ9UPU7 963 aa17.98■□□□□ 0.47
PTPN13-206ENST00000507902 KIF13BQ9NQT8 1826 aa17.98■□□□□ 0.47
PTPN13-206ENST00000507902 C10orf71Q711Q0 1435 aa17.98■□□□□ 0.47
PTPN13-206ENST00000507902 NBPF26B4DH59 902 aa17.97■□□□□ 0.47
PTPN13-206ENST00000507902 NBPF10Q6P3W6 841 aaKnown RBP17.97■□□□□ 0.47
PTPN13-206ENST00000507902 NBPF15Q8N660 670 aa17.97■□□□□ 0.47
PTPN13-206ENST00000507902 CARMIL3Q8ND23 1372 aa17.96■□□□□ 0.47
PTPN13-206ENST00000507902 EIF2S2P20042 333 aaKnown RBP17.96■□□□□ 0.47
PTPN13-206ENST00000507902 PIP4K2AP48426 406 aaPredicted RBP17.96■□□□□ 0.47
PTPN13-206ENST00000507902 WDR63Q8IWG1 891 aa17.96■□□□□ 0.47
PTPN13-206ENST00000507902 POLRMTO00411 1230 aaKnown RBP17.95■□□□□ 0.46
PTPN13-206ENST00000507902 CAMTA2O94983 1202 aa17.95■□□□□ 0.46
PTPN13-206ENST00000507902 TM4SF1P30408 202 aa17.95■□□□□ 0.46
PTPN13-206ENST00000507902 NFIXQ14938 502 aa17.95■□□□□ 0.46
PTPN13-206ENST00000507902 HDGFL1Q5TGJ6 251 aa17.95■□□□□ 0.46
PTPN13-206ENST00000507902 MYL6BP14649 208 aa17.94■□□□□ 0.46
PTPN13-206ENST00000507902 TGFB2P61812 414 aa17.94■□□□□ 0.46
PTPN13-206ENST00000507902 DDR1Q08345 913 aa17.94■□□□□ 0.46
PTPN13-206ENST00000507902 SETDB2Q96T68 719 aa17.94■□□□□ 0.46
PTPN13-206ENST00000507902 BCL2L12Q9HB09 334 aa17.94■□□□□ 0.46
PTPN13-206ENST00000507902 NRXN2Q9P2S2 1712 aa17.93■□□□□ 0.46
PTPN13-206ENST00000507902 ERVV-1B6SEH8 477 aa17.93■□□□□ 0.46
PTPN13-206ENST00000507902 DUSP27Q5VZP5 1158 aa17.93■□□□□ 0.46
PTPN13-206ENST00000507902 DBF4Q9UBU7 674 aaPredicted RBP17.93■□□□□ 0.46
PTPN13-206ENST00000507902 NPHP1O15259 732 aa17.92■□□□□ 0.46
PTPN13-206ENST00000507902 NLGN2Q8NFZ4 835 aa17.92■□□□□ 0.46
PTPN13-206ENST00000507902 DDX21Q9NR30 783 aaKnown RBP eCLIP17.92■□□□□ 0.46
PTPN13-206ENST00000507902 MAP3K15Q6ZN16 1313 aa17.92■□□□□ 0.46
PTPN13-206ENST00000507902 AFDNP55196 1824 aaKnown RBP17.91■□□□□ 0.46
PTPN13-206ENST00000507902 SERPINB2P05120 415 aa17.91■□□□□ 0.46
PTPN13-206ENST00000507902 TBC1D9BQ66K14 1250 aa17.91■□□□□ 0.46
PTPN13-206ENST00000507902 BICDL1Q6ZP65 573 aa17.91■□□□□ 0.46
PTPN13-206ENST00000507902 MYH16Q9H6N6 1097 aa17.91■□□□□ 0.46
PTPN13-206ENST00000507902 SALL2Q9Y467 1007 aaPredicted RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms