RNA–Protein interactions for RNA: ENST00000507185.1

PFDN1-202, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-202ENST00000507185 CHIC2Q9UKJ5 165 aa12.59□□□□□ -0.39
PFDN1-202ENST00000507185 DYRK1BQ9Y463 629 aa12.59□□□□□ -0.39
PFDN1-202ENST00000507185 UGGT2Q9NYU1 1516 aa12.58□□□□□ -0.4
PFDN1-202ENST00000507185 SPATA31C2B4DYI2 1134 aa12.58□□□□□ -0.4
PFDN1-202ENST00000507185 RAD21O60216 631 aa12.58□□□□□ -0.4
PFDN1-202ENST00000507185 GAS2L1Q99501 681 aaPredicted RBP12.58□□□□□ -0.4
PFDN1-202ENST00000507185 KIAA0556O60303 1618 aa12.58□□□□□ -0.4
PFDN1-202ENST00000507185 FLIIQ13045 1269 aa12.57□□□□□ -0.4
PFDN1-202ENST00000507185 MAP7D1Q3KQU3 841 aa12.57□□□□□ -0.4
PFDN1-202ENST00000507185 WDR44Q5JSH3 913 aa12.57□□□□□ -0.4
PFDN1-202ENST00000507185 TAS1R3Q7RTX0 852 aa12.57□□□□□ -0.4
PFDN1-202ENST00000507185 XAGE2Q96GT9 111 aa12.57□□□□□ -0.4
PFDN1-202ENST00000507185 GMCL1Q96IK5 515 aa12.57□□□□□ -0.4
PFDN1-202ENST00000507185 WASLO00401 505 aaPredicted RBP12.56□□□□□ -0.4
PFDN1-202ENST00000507185 GTF2E1P29083 439 aaPredicted RBP12.56□□□□□ -0.4
PFDN1-202ENST00000507185 TRIM22Q8IYM9 498 aa12.56□□□□□ -0.4
PFDN1-202ENST00000507185 PLPP7Q8NBV4 271 aa12.56□□□□□ -0.4
PFDN1-202ENST00000507185 ZSCAN10Q96SZ4 725 aaPredicted RBP12.56□□□□□ -0.4
PFDN1-202ENST00000507185 TIMMDC1Q9NPL8 285 aa12.56□□□□□ -0.4
PFDN1-202ENST00000507185 POM121Q96HA1 1249 aa12.55□□□□□ -0.4
PFDN1-202ENST00000507185 MAGI3Q5TCQ9 1506 aa12.54□□□□□ -0.4
PFDN1-202ENST00000507185 FOXR1Q6PIV2 292 aa12.54□□□□□ -0.4
PFDN1-202ENST00000507185 H7C1W4 665 aa12.53□□□□□ -0.4
PFDN1-202ENST00000507185 RAPGEF3O95398 923 aa12.53□□□□□ -0.4
PFDN1-202ENST00000507185 UBTFP17480 764 aaKnown RBP12.53□□□□□ -0.4
PFDN1-202ENST00000507185 DBN1Q16643 649 aa12.53□□□□□ -0.4
PFDN1-202ENST00000507185 TMEM214Q6NUQ4 689 aaKnown RBP12.53□□□□□ -0.4
PFDN1-202ENST00000507185 ZNF837Q96EG3 531 aaPredicted RBP12.53□□□□□ -0.4
PFDN1-202ENST00000507185 HRH3Q9Y5N1 445 aa12.53□□□□□ -0.4
PFDN1-202ENST00000507185 GOLGA3Q08378 1498 aa12.53□□□□□ -0.4
PFDN1-202ENST00000507185 RANGAP1P46060 587 aaPredicted RBP12.52□□□□□ -0.41
PFDN1-202ENST00000507185 GNASQ5JWF2 1037 aa12.52□□□□□ -0.41
PFDN1-202ENST00000507185 ETNK1Q9HBU6 452 aa12.52□□□□□ -0.41
PFDN1-202ENST00000507185 STAU1O95793 577 aaKnown RBP12.51□□□□□ -0.41
PFDN1-202ENST00000507185 PHKA2P46019 1235 aa12.51□□□□□ -0.41
PFDN1-202ENST00000507185 FHDC1Q9C0D6 1143 aaPredicted RBP12.51□□□□□ -0.41
PFDN1-202ENST00000507185 KIF21BO75037 1637 aa12.51□□□□□ -0.41
PFDN1-202ENST00000507185 F11P03951 625 aa12.5□□□□□ -0.41
PFDN1-202ENST00000507185 ALG2Q9H553 416 aa12.5□□□□□ -0.41
PFDN1-202ENST00000507185 SLURP2P0DP57 97 aa12.49□□□□□ -0.41
PFDN1-202ENST00000507185 PTPRMP28827 1452 aa12.48□□□□□ -0.41
PFDN1-202ENST00000507185 GPR25O00155 361 aa12.48□□□□□ -0.41
PFDN1-202ENST00000507185 PIK3CDO00329 1044 aa12.48□□□□□ -0.41
PFDN1-202ENST00000507185 TLR1Q15399 786 aa12.48□□□□□ -0.41
PFDN1-202ENST00000507185 GTPBP3Q969Y2 492 aaKnown RBP12.48□□□□□ -0.41
PFDN1-202ENST00000507185 GDF10P55107 478 aa12.47□□□□□ -0.41
PFDN1-202ENST00000507185 GAS6Q14393 721 aa12.47□□□□□ -0.41
PFDN1-202ENST00000507185 SVOPQ8N4V2 548 aa12.47□□□□□ -0.41
PFDN1-202ENST00000507185 TRERF1Q96PN7 1200 aa12.47□□□□□ -0.41
PFDN1-202ENST00000507185 ABCA8O94911 1581 aa12.47□□□□□ -0.41
PFDN1-202ENST00000507185 CFAP43Q8NDM7 1665 aa12.46□□□□□ -0.41
PFDN1-202ENST00000507185 A0A1B0GTH6 734 aa12.46□□□□□ -0.41
PFDN1-202ENST00000507185 ADAMTS2O95450 1211 aa12.46□□□□□ -0.41
PFDN1-202ENST00000507185 INHAP05111 366 aa12.46□□□□□ -0.41
PFDN1-202ENST00000507185 SKIP12755 728 aa12.46□□□□□ -0.41
PFDN1-202ENST00000507185 HSPA2P54652 639 aa12.46□□□□□ -0.41
PFDN1-202ENST00000507185 SRSF11Q05519 484 aaKnown RBP12.46□□□□□ -0.41
PFDN1-202ENST00000507185 C4orf17Q53FE4 359 aa12.46□□□□□ -0.41
PFDN1-202ENST00000507185 NUCKS1Q9H1E3 243 aaKnown RBP12.46□□□□□ -0.41
PFDN1-202ENST00000507185 GPAMQ9HCL2 828 aa12.46□□□□□ -0.41
PFDN1-202ENST00000507185 SCNN1DP51172 638 aa12.45□□□□□ -0.42
PFDN1-202ENST00000507185 EML3Q32P44 896 aa12.45□□□□□ -0.42
PFDN1-202ENST00000507185 ZNF385CQ66K41 422 aaPredicted RBP12.45□□□□□ -0.42
PFDN1-202ENST00000507185 PPARGC1BQ86YN6 1023 aaKnown RBP12.45□□□□□ -0.42
PFDN1-202ENST00000507185 RHBDD1Q8TEB9 315 aa12.45□□□□□ -0.42
PFDN1-202ENST00000507185 ARAP3Q8WWN8 1544 aa12.43□□□□□ -0.42
PFDN1-202ENST00000507185 MLECQ14165 292 aa12.43□□□□□ -0.42
PFDN1-202ENST00000507185 NFATC2IPQ8NCF5 419 aa12.43□□□□□ -0.42
PFDN1-202ENST00000507185 WHAMMQ8TF30 809 aa12.43□□□□□ -0.42
PFDN1-202ENST00000507185 MBIPQ9NS73 344 aa12.43□□□□□ -0.42
PFDN1-202ENST00000507185 ATP10BO94823 1461 aa12.42□□□□□ -0.42
PFDN1-202ENST00000507185 LZTS3O60299 673 aaPredicted RBP12.42□□□□□ -0.42
PFDN1-202ENST00000507185 ADAMTS8Q9UP79 889 aa12.42□□□□□ -0.42
PFDN1-202ENST00000507185 NOD1Q9Y239 953 aa12.42□□□□□ -0.42
PFDN1-202ENST00000507185 POM121CA8CG34 1229 aa12.41□□□□□ -0.42
PFDN1-202ENST00000507185 CSB-PGBD3P0DP91 1061 aa12.41□□□□□ -0.42
PFDN1-202ENST00000507185 PGBD3Q8N328 593 aa12.41□□□□□ -0.42
PFDN1-202ENST00000507185 SERTAD1Q9UHV2 236 aa12.41□□□□□ -0.42
PFDN1-202ENST00000507185 PHLDB1Q86UU1 1377 aa12.41□□□□□ -0.42
PFDN1-202ENST00000507185 SMTNP53814 917 aa12.4□□□□□ -0.42
PFDN1-202ENST00000507185 PCDHGA11Q9Y5H2 935 aa12.4□□□□□ -0.42
PFDN1-202ENST00000507185 PCF11O94913 1555 aaKnown RBP12.39□□□□□ -0.43
PFDN1-202ENST00000507185 MSX1P28360 303 aa12.39□□□□□ -0.43
PFDN1-202ENST00000507185 NCOA4Q13772 614 aa12.39□□□□□ -0.43
PFDN1-202ENST00000507185 LMTK3Q96Q04 1460 aa12.39□□□□□ -0.43
PFDN1-202ENST00000507185 TMEM229AB2RXF0 380 aa12.38□□□□□ -0.43
PFDN1-202ENST00000507185 MAP3K10Q02779 954 aa12.38□□□□□ -0.43
PFDN1-202ENST00000507185 HDGFL1Q5TGJ6 251 aa12.38□□□□□ -0.43
PFDN1-202ENST00000507185 LYPD4Q6UWN0 246 aa12.38□□□□□ -0.43
PFDN1-202ENST00000507185 RUBCNLQ9H714 662 aa12.38□□□□□ -0.43
PFDN1-202ENST00000507185 CTTNBP2Q8WZ74 1663 aa12.38□□□□□ -0.43
PFDN1-202ENST00000507185 USP17L5A8MUK1 530 aa12.37□□□□□ -0.43
PFDN1-202ENST00000507185 MX2P20592 715 aa12.37□□□□□ -0.43
PFDN1-202ENST00000507185 PLA2G4AP47712 749 aa12.37□□□□□ -0.43
PFDN1-202ENST00000507185 GTF2IP78347 998 aa12.37□□□□□ -0.43
PFDN1-202ENST00000507185 PSME1Q06323 249 aa12.37□□□□□ -0.43
PFDN1-202ENST00000507185 DEPDC4Q8N2C3 294 aa12.37□□□□□ -0.43
PFDN1-202ENST00000507185 NIFKQ9BYG3 293 aaKnown RBP12.37□□□□□ -0.43
PFDN1-202ENST00000507185 NSFL1CQ9UNZ2 370 aaKnown RBP12.37□□□□□ -0.43
PFDN1-202ENST00000507185 NEO1Q92859 1461 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms