RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 THUMPD2Q9BTF0 503 aaKnown RBP26.06■■□□□ 1.76
SNX25-204ENST00000506896 CYP19A1P11511 503 aaPredicted RBP26.05■■□□□ 1.76
SNX25-204ENST00000506896 HEG1Q9ULI3 1381 aa26.05■■□□□ 1.76
SNX25-204ENST00000506896 TEX13AQ9BXU3 409 aaPredicted RBP26.04■■□□□ 1.76
SNX25-204ENST00000506896 BABAM1Q9NWV8 329 aa26.04■■□□□ 1.76
SNX25-204ENST00000506896 TRIM35Q9UPQ4 493 aa26.04■■□□□ 1.76
SNX25-204ENST00000506896 C4AP0C0L4 1744 aa26.03■■□□□ 1.76
SNX25-204ENST00000506896 CCER2I3L3R5 266 aa26.03■■□□□ 1.76
SNX25-204ENST00000506896 KLHL34Q8N239 644 aa26.03■■□□□ 1.76
SNX25-204ENST00000506896 NLGN2Q8NFZ4 835 aa26.03■■□□□ 1.76
SNX25-204ENST00000506896 RFC4P35249 363 aa26.02■■□□□ 1.76
SNX25-204ENST00000506896 CCDC87Q9NVE4 849 aa26.02■■□□□ 1.76
SNX25-204ENST00000506896 KCNQ3O43525 872 aa26.01■■□□□ 1.75
SNX25-204ENST00000506896 STARD3NLO95772 234 aa26.01■■□□□ 1.75
SNX25-204ENST00000506896 GYS1P13807 737 aa26.01■■□□□ 1.75
SNX25-204ENST00000506896 NLGN1Q8N2Q7 840 aa26.01■■□□□ 1.75
SNX25-204ENST00000506896 CD2APQ9Y5K6 639 aa26.01■■□□□ 1.75
SNX25-204ENST00000506896 FAM9BQ8IZU0 186 aa26■■□□□ 1.75
SNX25-204ENST00000506896 GOLGB1Q14789 3259 aaKnown RBP25.99■■□□□ 1.75
SNX25-204ENST00000506896 NCBP3Q53F19 620 aaKnown RBP25.99■■□□□ 1.75
SNX25-204ENST00000506896 MIS18AQ9NYP9 233 aa25.99■■□□□ 1.75
SNX25-204ENST00000506896 KDM3BQ7LBC6 1761 aa25.99■■□□□ 1.75
SNX25-204ENST00000506896 SOS1Q07889 1333 aaPredicted RBP25.98■■□□□ 1.75
SNX25-204ENST00000506896 SNRPA1P09661 255 aaKnown RBP25.98■■□□□ 1.75
SNX25-204ENST00000506896 CALD1Q05682 793 aaKnown RBP25.98■■□□□ 1.75
SNX25-204ENST00000506896 TSPYL4Q9UJ04 414 aa25.98■■□□□ 1.75
SNX25-204ENST00000506896 MMP10P09238 476 aa25.96■■□□□ 1.75
SNX25-204ENST00000506896 CCDC27Q2M243 656 aa25.96■■□□□ 1.75
SNX25-204ENST00000506896 ZBTB1Q9Y2K1 713 aa25.96■■□□□ 1.75
SNX25-204ENST00000506896 USP42Q9H9J4 1324 aaKnown RBP25.95■■□□□ 1.75
SNX25-204ENST00000506896 SRP68Q9UHB9 627 aaKnown RBP25.95■■□□□ 1.74
SNX25-204ENST00000506896 EIF4A1P60842 406 aaKnown RBP25.94■■□□□ 1.74
SNX25-204ENST00000506896 CHL1O00533 1208 aa25.93■■□□□ 1.74
SNX25-204ENST00000506896 GPR162Q16538 588 aa25.92■■□□□ 1.74
SNX25-204ENST00000506896 NGEFQ8N5V2 710 aa25.92■■□□□ 1.74
SNX25-204ENST00000506896 CFAP44Q96MT7 982 aa25.92■■□□□ 1.74
SNX25-204ENST00000506896 KIF13BQ9NQT8 1826 aa25.92■■□□□ 1.74
SNX25-204ENST00000506896 CHD4Q14839 1912 aa25.92■■□□□ 1.74
SNX25-204ENST00000506896 EIF5P55010 431 aaKnown RBP25.91■■□□□ 1.74
SNX25-204ENST00000506896 FKBP8Q14318 412 aa25.91■■□□□ 1.74
SNX25-204ENST00000506896 GIGYF1O75420 1035 aaPredicted RBP25.9■■□□□ 1.74
SNX25-204ENST00000506896 NARFQ9UHQ1 456 aa25.9■■□□□ 1.74
SNX25-204ENST00000506896 LAS1LQ9Y4W2 734 aaKnown RBP25.9■■□□□ 1.74
SNX25-204ENST00000506896 USP16Q9Y5T5 823 aa25.9■■□□□ 1.74
SNX25-204ENST00000506896 COL15A1P39059 1388 aa25.9■■□□□ 1.74
SNX25-204ENST00000506896 YY1P25490 414 aa25.89■■□□□ 1.74
SNX25-204ENST00000506896 CANXP27824 592 aaKnown RBP25.89■■□□□ 1.74
SNX25-204ENST00000506896 TM4SF1P30408 202 aa25.89■■□□□ 1.74
SNX25-204ENST00000506896 USPL1Q5W0Q7 1092 aa25.89■■□□□ 1.74
SNX25-204ENST00000506896 IFT57Q9NWB7 429 aa25.89■■□□□ 1.74
SNX25-204ENST00000506896 ZPR1O75312 459 aa25.88■■□□□ 1.73
SNX25-204ENST00000506896 GNAI1P63096 354 aa25.88■■□□□ 1.73
SNX25-204ENST00000506896 WWC1Q8IX03 1113 aa25.88■■□□□ 1.73
SNX25-204ENST00000506896 PRAMEF22A3QJZ6 481 aa25.87■■□□□ 1.73
SNX25-204ENST00000506896 YBX3P16989 372 aaKnown RBP eCLIP25.87■■□□□ 1.73
SNX25-204ENST00000506896 MIER1Q8N108 512 aa25.87■■□□□ 1.73
SNX25-204ENST00000506896 PARP3Q9Y6F1 533 aa25.87■■□□□ 1.73
SNX25-204ENST00000506896 LAMB4A4D0S4 1761 aa25.87■■□□□ 1.73
SNX25-204ENST00000506896 A1BGP04217 495 aa25.86■■□□□ 1.73
SNX25-204ENST00000506896 ZNF853P0CG23 659 aa25.86■■□□□ 1.73
SNX25-204ENST00000506896 IL6STP40189 918 aaPredicted RBP25.86■■□□□ 1.73
SNX25-204ENST00000506896 BCL2L12Q9HB09 334 aa25.86■■□□□ 1.73
SNX25-204ENST00000506896 A0A087WZG4 1122 aa25.85■■□□□ 1.73
SNX25-204ENST00000506896 DDR1Q08345 913 aa25.85■■□□□ 1.73
SNX25-204ENST00000506896 NPM2Q86SE8 214 aaKnown RBP25.85■■□□□ 1.73
SNX25-204ENST00000506896 PELP1Q8IZL8 1130 aaKnown RBP25.84■■□□□ 1.73
SNX25-204ENST00000506896 KIAA1551Q9HCM1 1747 aa25.84■■□□□ 1.73
SNX25-204ENST00000506896 C10orf71Q711Q0 1435 aa25.83■■□□□ 1.73
SNX25-204ENST00000506896 TGFB2P61812 414 aa25.83■■□□□ 1.73
SNX25-204ENST00000506896 MBIPQ9NS73 344 aa25.83■■□□□ 1.73
SNX25-204ENST00000506896 IL16Q14005 1332 aa25.83■■□□□ 1.73
SNX25-204ENST00000506896 POLRMTO00411 1230 aaKnown RBP25.82■■□□□ 1.72
SNX25-204ENST00000506896 GRIN3BO60391 1043 aa25.82■■□□□ 1.72
SNX25-204ENST00000506896 WDR63Q8IWG1 891 aa25.82■■□□□ 1.72
SNX25-204ENST00000506896 SENP3-EIF4A1A0A087X0R7 540 aa25.81■■□□□ 1.72
SNX25-204ENST00000506896 HOXB7P09629 217 aa25.81■■□□□ 1.72
SNX25-204ENST00000506896 ERBB4Q15303 1308 aa25.81■■□□□ 1.72
SNX25-204ENST00000506896 N4BP2Q86UW6 1770 aaPredicted RBP25.8■■□□□ 1.72
SNX25-204ENST00000506896 PXDNLA1KZ92 1463 aa25.79■■□□□ 1.72
SNX25-204ENST00000506896 AFDNP55196 1824 aaKnown RBP25.79■■□□□ 1.72
SNX25-204ENST00000506896 NFIXQ14938 502 aa25.79■■□□□ 1.72
SNX25-204ENST00000506896 ZNF330Q9Y3S2 320 aaPredicted RBP25.79■■□□□ 1.72
SNX25-204ENST00000506896 SALL2Q9Y467 1007 aaPredicted RBP25.79■■□□□ 1.72
SNX25-204ENST00000506896 TBC1D2BQ9UPU7 963 aa25.78■■□□□ 1.72
SNX25-204ENST00000506896 NRXN2Q9P2S2 1712 aa25.77■■□□□ 1.72
SNX25-204ENST00000506896 A0A0G2JLW4 131 aa25.76■■□□□ 1.71
SNX25-204ENST00000506896 NBPF26B4DH59 902 aa25.76■■□□□ 1.71
SNX25-204ENST00000506896 NBPF10Q6P3W6 841 aaKnown RBP25.76■■□□□ 1.71
SNX25-204ENST00000506896 NBPF15Q8N660 670 aa25.76■■□□□ 1.71
SNX25-204ENST00000506896 KCNA3P22001 575 aa25.75■■□□□ 1.71
SNX25-204ENST00000506896 PIP4K2AP48426 406 aaPredicted RBP25.75■■□□□ 1.71
SNX25-204ENST00000506896 BRCA1P38398 1863 aaKnown RBP25.74■■□□□ 1.71
SNX25-204ENST00000506896 SCN7AQ01118 1682 aa25.74■■□□□ 1.71
SNX25-204ENST00000506896 CAMTA2O94983 1202 aa25.74■■□□□ 1.71
SNX25-204ENST00000506896 DPEP1P16444 411 aa25.74■■□□□ 1.71
SNX25-204ENST00000506896 EIF2S2P20042 333 aaKnown RBP25.74■■□□□ 1.71
SNX25-204ENST00000506896 KRT24Q2M2I5 525 aa25.74■■□□□ 1.71
SNX25-204ENST00000506896 SERPINB2P05120 415 aa25.73■■□□□ 1.71
SNX25-204ENST00000506896 DUSP27Q5VZP5 1158 aa25.73■■□□□ 1.71
SNX25-204ENST00000506896 DZIP3Q86Y13 1208 aaKnown RBP25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms