RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 ZNF787Q6DD87 383 aa5.62□□□□□ -1.51
GYPB-207ENST00000506679 HINFPQ9BQA5 517 aa5.62□□□□□ -1.51
GYPB-207ENST00000506679 CXXC1Q9P0U4 656 aaPredicted RBP5.62□□□□□ -1.51
GYPB-207ENST00000506679 DYRK1BQ9Y463 629 aa5.62□□□□□ -1.51
GYPB-207ENST00000506679 A0A1B0GTH6 734 aa5.61□□□□□ -1.51
GYPB-207ENST00000506679 CARNS1A5YM72 827 aa5.61□□□□□ -1.51
GYPB-207ENST00000506679 LGR5O75473 907 aa5.61□□□□□ -1.51
GYPB-207ENST00000506679 ATP4AP20648 1035 aa5.61□□□□□ -1.51
GYPB-207ENST00000506679 NOS2P35228 1153 aa5.61□□□□□ -1.51
GYPB-207ENST00000506679 PLA2G4AP47712 749 aa5.61□□□□□ -1.51
GYPB-207ENST00000506679 SH3PXD2AQ5TCZ1 1133 aa5.61□□□□□ -1.51
GYPB-207ENST00000506679 PHLDB3Q6NSJ2 640 aa5.61□□□□□ -1.51
GYPB-207ENST00000506679 C1orf216Q8TAB5 229 aa5.61□□□□□ -1.51
GYPB-207ENST00000506679 C7orf43Q8WVR3 580 aa5.61□□□□□ -1.51
GYPB-207ENST00000506679 SCG3Q8WXD2 468 aaKnown RBP5.61□□□□□ -1.51
GYPB-207ENST00000506679 L3MBTL2Q969R5 705 aa5.61□□□□□ -1.51
GYPB-207ENST00000506679 ZDHHC3Q9NYG2 299 aa5.61□□□□□ -1.51
GYPB-207ENST00000506679 PPP1R12BO60237 982 aaPredicted RBP5.6□□□□□ -1.51
GYPB-207ENST00000506679 PRMT3O60678 531 aa5.6□□□□□ -1.51
GYPB-207ENST00000506679 SSFA2P28290 1259 aa5.6□□□□□ -1.51
GYPB-207ENST00000506679 PHKA2P46019 1235 aa5.6□□□□□ -1.51
GYPB-207ENST00000506679 FKBP5Q13451 457 aaPredicted RBP5.6□□□□□ -1.51
GYPB-207ENST00000506679 PRIMPOLQ96LW4 560 aa5.6□□□□□ -1.51
GYPB-207ENST00000506679 TIMMDC1Q9NPL8 285 aa5.6□□□□□ -1.51
GYPB-207ENST00000506679 CABP1Q9NZU7 370 aa5.6□□□□□ -1.51
GYPB-207ENST00000506679 SERTM1A2A2V5 107 aa5.59□□□□□ -1.51
GYPB-207ENST00000506679 ATP2B4P23634 1241 aa5.59□□□□□ -1.51
GYPB-207ENST00000506679 TXLNAP40222 546 aa5.59□□□□□ -1.51
GYPB-207ENST00000506679 PDE4CQ08493 712 aa5.59□□□□□ -1.51
GYPB-207ENST00000506679 NPAS3Q8IXF0 933 aa5.59□□□□□ -1.51
GYPB-207ENST00000506679 CCDC155Q8N6L0 562 aa5.59□□□□□ -1.51
GYPB-207ENST00000506679 COL26A1Q96A83 441 aa5.59□□□□□ -1.51
GYPB-207ENST00000506679 CRISPLD1Q9H336 500 aa5.59□□□□□ -1.51
GYPB-207ENST00000506679 PPFIA3O75145 1194 aa5.58□□□□□ -1.52
GYPB-207ENST00000506679 F11P03951 625 aa5.58□□□□□ -1.52
GYPB-207ENST00000506679 THBS1P07996 1170 aa5.58□□□□□ -1.52
GYPB-207ENST00000506679 MSX1P28360 303 aa5.58□□□□□ -1.52
GYPB-207ENST00000506679 C1orf53Q5VUE5 145 aa5.58□□□□□ -1.52
GYPB-207ENST00000506679 NXF1Q9UBU9 619 aaKnown RBP5.58□□□□□ -1.52
GYPB-207ENST00000506679 GPC6Q9Y625 555 aaPredicted RBP5.58□□□□□ -1.52
GYPB-207ENST00000506679 PARP3Q9Y6F1 533 aa5.58□□□□□ -1.52
GYPB-207ENST00000506679 ITGA6P23229 1130 aa5.57□□□□□ -1.52
GYPB-207ENST00000506679 NBPF1Q3BBV0 1214 aa5.57□□□□□ -1.52
GYPB-207ENST00000506679 NANOS1Q8WY41 292 aaKnown RBP5.57□□□□□ -1.52
GYPB-207ENST00000506679 MYO19Q96H55 970 aa5.57□□□□□ -1.52
GYPB-207ENST00000506679 TRAIPQ9BWF2 469 aa5.57□□□□□ -1.52
GYPB-207ENST00000506679 QTRT2Q9H974 415 aaKnown RBP5.57□□□□□ -1.52
GYPB-207ENST00000506679 CUEDC1Q9NWM3 386 aaPredicted RBP5.57□□□□□ -1.52
GYPB-207ENST00000506679 CHMP3Q9Y3E7 222 aa5.57□□□□□ -1.52
GYPB-207ENST00000506679 H3BM21 787 aa5.56□□□□□ -1.52
GYPB-207ENST00000506679 VSIG8P0DPA2 414 aa5.56□□□□□ -1.52
GYPB-207ENST00000506679 UBAP2LQ14157 1087 aaKnown RBP5.56□□□□□ -1.52
GYPB-207ENST00000506679 LBRQ14739 615 aaKnown RBP5.56□□□□□ -1.52
GYPB-207ENST00000506679 TRIM22Q8IYM9 498 aa5.56□□□□□ -1.52
GYPB-207ENST00000506679 ALDH16A1Q8IZ83 802 aa5.56□□□□□ -1.52
GYPB-207ENST00000506679 CHMP7Q8WUX9 453 aaPredicted RBP5.56□□□□□ -1.52
GYPB-207ENST00000506679 KLRG1Q96E93 195 aa5.56□□□□□ -1.52
GYPB-207ENST00000506679 GMCL1Q96IK5 515 aa5.56□□□□□ -1.52
GYPB-207ENST00000506679 PHACTR1Q9C0D0 580 aa5.56□□□□□ -1.52
GYPB-207ENST00000506679 ZNF232Q9UNY5 417 aa5.56□□□□□ -1.52
GYPB-207ENST00000506679 TERTO14746 1132 aaKnown RBP5.55□□□□□ -1.52
GYPB-207ENST00000506679 PTCD1O75127 700 aaKnown RBP5.55□□□□□ -1.52
GYPB-207ENST00000506679 DBN1Q16643 649 aa5.55□□□□□ -1.52
GYPB-207ENST00000506679 RTN1Q16799 776 aa5.55□□□□□ -1.52
GYPB-207ENST00000506679 B4GALNT3Q6L9W6 998 aa5.55□□□□□ -1.52
GYPB-207ENST00000506679 CAPN12Q6ZSI9 719 aa5.55□□□□□ -1.52
GYPB-207ENST00000506679 ZIC5Q96T25 663 aa5.55□□□□□ -1.52
GYPB-207ENST00000506679 HCN4Q9Y3Q4 1203 aa5.55□□□□□ -1.52
GYPB-207ENST00000506679 BRD1O95696 1058 aa5.54□□□□□ -1.52
GYPB-207ENST00000506679 TATP17735 454 aaPredicted RBP5.54□□□□□ -1.52
GYPB-207ENST00000506679 NFX1Q12986 1120 aaKnown RBP5.54□□□□□ -1.52
GYPB-207ENST00000506679 LCE2CQ5TA81 110 aa5.54□□□□□ -1.52
GYPB-207ENST00000506679 NLRP8Q86W28 1048 aa5.54□□□□□ -1.52
GYPB-207ENST00000506679 AIDAQ96BJ3 306 aa5.54□□□□□ -1.52
GYPB-207ENST00000506679 ZNF837Q96EG3 531 aaPredicted RBP5.54□□□□□ -1.52
GYPB-207ENST00000506679 GAS2L1Q99501 681 aaPredicted RBP5.54□□□□□ -1.52
GYPB-207ENST00000506679 RUBCNLQ9H714 662 aa5.54□□□□□ -1.52
GYPB-207ENST00000506679 GPAMQ9HCL2 828 aa5.54□□□□□ -1.52
GYPB-207ENST00000506679 H7C1W4 665 aa5.53□□□□□ -1.52
GYPB-207ENST00000506679 SCNN1AP37088 669 aa5.53□□□□□ -1.52
GYPB-207ENST00000506679 COX20Q5RI15 118 aa5.53□□□□□ -1.52
GYPB-207ENST00000506679 LCE2AQ5TA79 106 aaPredicted RBP5.53□□□□□ -1.52
GYPB-207ENST00000506679 SAMD5Q5TGI4 173 aa5.53□□□□□ -1.52
GYPB-207ENST00000506679 TXNDC2Q86VQ3 553 aa5.53□□□□□ -1.52
GYPB-207ENST00000506679 RHPN1Q8TCX5 695 aa5.53□□□□□ -1.52
GYPB-207ENST00000506679 MKNK1Q9BUB5 465 aa5.53□□□□□ -1.52
GYPB-207ENST00000506679 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.53□□□□□ -1.522e-23■■■■■ 397.5
GYPB-207ENST00000506679 NDFIP2Q9NV92 336 aa5.53□□□□□ -1.52
GYPB-207ENST00000506679 SEPT3Q9UH03 358 aa5.53□□□□□ -1.52
GYPB-207ENST00000506679 LRFN2Q9ULH4 789 aa5.53□□□□□ -1.52
GYPB-207ENST00000506679 A0A1W2PNR3 127 aa5.52□□□□□ -1.53
GYPB-207ENST00000506679 TNFRSF10BO14763 440 aa5.52□□□□□ -1.53
GYPB-207ENST00000506679 VEGFBP49765 207 aa5.52□□□□□ -1.53
GYPB-207ENST00000506679 IER5Q5VY09 327 aa5.52□□□□□ -1.53
GYPB-207ENST00000506679 C16orf46Q6P387 395 aa5.52□□□□□ -1.53
GYPB-207ENST00000506679 RIPOR1Q6ZS17 1223 aa5.52□□□□□ -1.53
GYPB-207ENST00000506679 PGBD3Q8N328 593 aa5.52□□□□□ -1.53
GYPB-207ENST00000506679 VTI1AQ96AJ9 217 aa5.52□□□□□ -1.53
GYPB-207ENST00000506679 ZNF775Q96BV0 537 aaPredicted RBP5.52□□□□□ -1.53
GYPB-207ENST00000506679 NGLY1Q96IV0 654 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms