RNA–Protein interactions for RNA: ENST00000506617.1

DSP-203, Transcript of desmoplakin, humanhuman

TSL 3

Gene DSP, Length 754 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-203ENST00000506617 TAF7Q15545 349 aaPredicted RBP19.33■□□□□ 0.68
DSP-203ENST00000506617 MSL1Q68DK7 614 aa19.33■□□□□ 0.68
DSP-203ENST00000506617 FMNL2Q96PY5 1086 aa19.33■□□□□ 0.68
DSP-203ENST00000506617 LAMB4A4D0S4 1761 aa19.33■□□□□ 0.68
DSP-203ENST00000506617 CYP19A1P11511 503 aaPredicted RBP19.32■□□□□ 0.68
DSP-203ENST00000506617 NEUROD2Q15784 382 aa19.32■□□□□ 0.68
DSP-203ENST00000506617 WDR63Q8IWG1 891 aa19.32■□□□□ 0.68
DSP-203ENST00000506617 WWC1Q8IX03 1113 aa19.32■□□□□ 0.68
DSP-203ENST00000506617 IL16Q14005 1332 aa19.31■□□□□ 0.68
DSP-203ENST00000506617 INTS5Q6P9B9 1019 aaKnown RBP19.31■□□□□ 0.68
DSP-203ENST00000506617 CCDC87Q9NVE4 849 aa19.31■□□□□ 0.68
DSP-203ENST00000506617 MIS18AQ9NYP9 233 aa19.31■□□□□ 0.68
DSP-203ENST00000506617 ZNF521Q96K83 1311 aa19.3■□□□□ 0.68
DSP-203ENST00000506617 ADRA2BP18089 450 aa19.3■□□□□ 0.68
DSP-203ENST00000506617 ZBTB1Q9Y2K1 713 aa19.3■□□□□ 0.68
DSP-203ENST00000506617 POLD1P28340 1107 aa19.29■□□□□ 0.68
DSP-203ENST00000506617 TRAPPC3LQ5T215 181 aa19.29■□□□□ 0.68
DSP-203ENST00000506617 SOS1Q07889 1333 aaPredicted RBP19.28■□□□□ 0.68
DSP-203ENST00000506617 ARHGEF1Q92888 912 aaKnown RBP19.28■□□□□ 0.68
DSP-203ENST00000506617 ARXQ96QS3 562 aa19.28■□□□□ 0.68
DSP-203ENST00000506617 STARD3NLO95772 234 aa19.27■□□□□ 0.68
DSP-203ENST00000506617 CFAP44Q96MT7 982 aa19.27■□□□□ 0.68
DSP-203ENST00000506617 TEX13AQ9BXU3 409 aaPredicted RBP19.27■□□□□ 0.68
DSP-203ENST00000506617 COL15A1P39059 1388 aa19.27■□□□□ 0.68
DSP-203ENST00000506617 PRAMEF22A3QJZ6 481 aa19.26■□□□□ 0.67
DSP-203ENST00000506617 RFC4P35249 363 aa19.26■□□□□ 0.67
DSP-203ENST00000506617 IFT57Q9NWB7 429 aa19.26■□□□□ 0.67
DSP-203ENST00000506617 CHL1O00533 1208 aa19.25■□□□□ 0.67
DSP-203ENST00000506617 SNRPA1P09661 255 aaKnown RBP19.25■□□□□ 0.67
DSP-203ENST00000506617 ZNF853P0CG23 659 aa19.25■□□□□ 0.67
DSP-203ENST00000506617 CANXP27824 592 aaKnown RBP19.25■□□□□ 0.67
DSP-203ENST00000506617 GNAI1P63096 354 aa19.25■□□□□ 0.67
DSP-203ENST00000506617 FHDC1Q9C0D6 1143 aaPredicted RBP19.25■□□□□ 0.67
DSP-203ENST00000506617 USP16Q9Y5T5 823 aa19.25■□□□□ 0.67
DSP-203ENST00000506617 USP42Q9H9J4 1324 aaKnown RBP19.25■□□□□ 0.67
DSP-203ENST00000506617 HNRNPUQ00839 825 aaKnown RBP eCLIP19.24■□□□□ 0.67
DSP-203ENST00000506617 SRP68Q9UHB9 627 aaKnown RBP19.24■□□□□ 0.67
DSP-203ENST00000506617 TSPYL4Q9UJ04 414 aa19.24■□□□□ 0.67
DSP-203ENST00000506617 ZBED9Q6R2W3 1325 aa19.24■□□□□ 0.67
DSP-203ENST00000506617 SCN7AQ01118 1682 aa19.24■□□□□ 0.67
DSP-203ENST00000506617 A1BGP04217 495 aa19.23■□□□□ 0.67
DSP-203ENST00000506617 GYS1P13807 737 aa19.23■□□□□ 0.67
DSP-203ENST00000506617 EIF4A1P60842 406 aaKnown RBP19.23■□□□□ 0.67
DSP-203ENST00000506617 BCORQ6W2J9 1755 aa19.22■□□□□ 0.67
DSP-203ENST00000506617 KLHL34Q8N239 644 aa19.22■□□□□ 0.67
DSP-203ENST00000506617 GOLGA2Q08379 1002 aa19.21■□□□□ 0.67
DSP-203ENST00000506617 SENP3-EIF4A1A0A087X0R7 540 aa19.2■□□□□ 0.66
DSP-203ENST00000506617 PIP4K2AP48426 406 aaPredicted RBP19.2■□□□□ 0.66
DSP-203ENST00000506617 EIF5P55010 431 aaKnown RBP19.2■□□□□ 0.66
DSP-203ENST00000506617 SYT17Q9BSW7 474 aa19.2■□□□□ 0.66
DSP-203ENST00000506617 ZNF330Q9Y3S2 320 aaPredicted RBP19.2■□□□□ 0.66
DSP-203ENST00000506617 LAS1LQ9Y4W2 734 aaKnown RBP19.2■□□□□ 0.66
DSP-203ENST00000506617 E9PSI1 815 aa19.19■□□□□ 0.66
DSP-203ENST00000506617 GIGYF1O75420 1035 aaPredicted RBP19.19■□□□□ 0.66
DSP-203ENST00000506617 MMP10P09238 476 aa19.19■□□□□ 0.66
DSP-203ENST00000506617 IL6STP40189 918 aaPredicted RBP19.19■□□□□ 0.66
DSP-203ENST00000506617 USPL1Q5W0Q7 1092 aa19.19■□□□□ 0.66
DSP-203ENST00000506617 NLGN1Q8N2Q7 840 aa19.19■□□□□ 0.66
DSP-203ENST00000506617 MYH16Q9H6N6 1097 aa19.19■□□□□ 0.66
DSP-203ENST00000506617 SALL2Q9Y467 1007 aaPredicted RBP19.19■□□□□ 0.66
DSP-203ENST00000506617 KIF13BQ9NQT8 1826 aa19.18■□□□□ 0.66
DSP-203ENST00000506617 ZPR1O75312 459 aa19.18■□□□□ 0.66
DSP-203ENST00000506617 FKBP8Q14318 412 aa19.18■□□□□ 0.66
DSP-203ENST00000506617 NARFQ9UHQ1 456 aa19.18■□□□□ 0.66
DSP-203ENST00000506617 TRMT2AQ8IZ69 625 aaKnown RBP19.17■□□□□ 0.66
DSP-203ENST00000506617 AFDNP55196 1824 aaKnown RBP19.16■□□□□ 0.66
DSP-203ENST00000506617 A0A087WZG4 1122 aa19.16■□□□□ 0.66
DSP-203ENST00000506617 BCL2L12Q9HB09 334 aa19.16■□□□□ 0.66
DSP-203ENST00000506617 MBIPQ9NS73 344 aa19.16■□□□□ 0.66
DSP-203ENST00000506617 NBPF26B4DH59 902 aa19.15■□□□□ 0.66
DSP-203ENST00000506617 SLFN5Q08AF3 891 aa19.15■□□□□ 0.66
DSP-203ENST00000506617 NBPF10Q6P3W6 841 aaKnown RBP19.15■□□□□ 0.66
DSP-203ENST00000506617 NBPF15Q8N660 670 aa19.15■□□□□ 0.66
DSP-203ENST00000506617 HOXB7P09629 217 aa19.14■□□□□ 0.65
DSP-203ENST00000506617 NPM2Q86SE8 214 aaKnown RBP19.14■□□□□ 0.65
DSP-203ENST00000506617 NLGN2Q8NFZ4 835 aa19.14■□□□□ 0.65
DSP-203ENST00000506617 CHMP4AQ9BY43 222 aa19.14■□□□□ 0.65
DSP-203ENST00000506617 TBC1D2BQ9UPU7 963 aa19.14■□□□□ 0.65
DSP-203ENST00000506617 KIAA1551Q9HCM1 1747 aa19.14■□□□□ 0.65
DSP-203ENST00000506617 DDR1Q08345 913 aa19.13■□□□□ 0.65
DSP-203ENST00000506617 KRT24Q2M2I5 525 aa19.13■□□□□ 0.65
DSP-203ENST00000506617 DZIP3Q86Y13 1208 aaKnown RBP19.13■□□□□ 0.65
DSP-203ENST00000506617 NRXN2Q9P2S2 1712 aa19.13■□□□□ 0.65
DSP-203ENST00000506617 C10orf71Q711Q0 1435 aa19.12■□□□□ 0.65
DSP-203ENST00000506617 FANCIQ9NVI1 1328 aa19.12■□□□□ 0.65
DSP-203ENST00000506617 SPINK5Q9NQ38 1064 aaPredicted RBP19.12■□□□□ 0.65
DSP-203ENST00000506617 PARP3Q9Y6F1 533 aa19.12■□□□□ 0.65
DSP-203ENST00000506617 N4BP2Q86UW6 1770 aaPredicted RBP19.11■□□□□ 0.65
DSP-203ENST00000506617 CAMTA2O94983 1202 aa19.11■□□□□ 0.65
DSP-203ENST00000506617 TM4SF1P30408 202 aa19.11■□□□□ 0.65
DSP-203ENST00000506617 CD2APQ9Y5K6 639 aa19.11■□□□□ 0.65
DSP-203ENST00000506617 ERBB4Q15303 1308 aa19.1■□□□□ 0.65
DSP-203ENST00000506617 POLRMTO00411 1230 aaKnown RBP19.1■□□□□ 0.65
DSP-203ENST00000506617 EIF2S2P20042 333 aaKnown RBP19.1■□□□□ 0.65
DSP-203ENST00000506617 NFIXQ14938 502 aa19.1■□□□□ 0.65
DSP-203ENST00000506617 NUP98P52948 1817 aa19.09■□□□□ 0.65
DSP-203ENST00000506617 CT47B1P0C2W7 299 aaPredicted RBP19.09■□□□□ 0.65
DSP-203ENST00000506617 MYL6BP14649 208 aa19.09■□□□□ 0.65
DSP-203ENST00000506617 DUSP27Q5VZP5 1158 aa19.08■□□□□ 0.64
DSP-203ENST00000506617 TBC1D9BQ66K14 1250 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms