RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 C4AP0C0L4 1744 aa18.04■□□□□ 0.48
SERF1B-204ENST00000506542 CICQ96RK0 1608 aaPredicted RBP18.04■□□□□ 0.48
SERF1B-204ENST00000506542 E9PSI1 815 aa18.04■□□□□ 0.48
SERF1B-204ENST00000506542 RIPK4P57078 832 aa18.04■□□□□ 0.48
SERF1B-204ENST00000506542 TTC5Q8N0Z6 440 aa18.04■□□□□ 0.48
SERF1B-204ENST00000506542 COL24A1Q17RW2 1714 aa18.03■□□□□ 0.48
SERF1B-204ENST00000506542 INTS5Q6P9B9 1019 aaKnown RBP18.03■□□□□ 0.48
SERF1B-204ENST00000506542 SPINK5Q9NQ38 1064 aaPredicted RBP18.03■□□□□ 0.48
SERF1B-204ENST00000506542 PPP1R1BQ9UD71 204 aaPredicted RBP18.03■□□□□ 0.48
SERF1B-204ENST00000506542 TRIM35Q9UPQ4 493 aa18.03■□□□□ 0.48
SERF1B-204ENST00000506542 NEFLP07196 543 aa18.02■□□□□ 0.47
SERF1B-204ENST00000506542 CNTNAP4Q9C0A0 1308 aa18.01■□□□□ 0.47
SERF1B-204ENST00000506542 KDM3BQ7LBC6 1761 aa18.01■□□□□ 0.47
SERF1B-204ENST00000506542 CYP19A1P11511 503 aaPredicted RBP18.01■□□□□ 0.47
SERF1B-204ENST00000506542 HTATSF1O43719 755 aaKnown RBP18■□□□□ 0.47
SERF1B-204ENST00000506542 PIP4K2AP48426 406 aaPredicted RBP18■□□□□ 0.47
SERF1B-204ENST00000506542 ZBTB1Q9Y2K1 713 aa18■□□□□ 0.47
SERF1B-204ENST00000506542 HEG1Q9ULI3 1381 aa18■□□□□ 0.47
SERF1B-204ENST00000506542 RNF123Q5XPI4 1314 aa18■□□□□ 0.47
SERF1B-204ENST00000506542 SSFA2P28290 1259 aa17.99■□□□□ 0.47
SERF1B-204ENST00000506542 ARHGEF1Q92888 912 aaKnown RBP17.99■□□□□ 0.47
SERF1B-204ENST00000506542 RTCBQ9Y3I0 505 aaKnown RBP17.99■□□□□ 0.47
SERF1B-204ENST00000506542 TAF7Q15545 349 aaPredicted RBP17.99■□□□□ 0.47
SERF1B-204ENST00000506542 RTN4Q9NQC3 1192 aaKnown RBP17.99■□□□□ 0.47
SERF1B-204ENST00000506542 SRP68Q9UHB9 627 aaKnown RBP17.99■□□□□ 0.47
SERF1B-204ENST00000506542 RCAN3Q9UKA8 241 aa17.99■□□□□ 0.47
SERF1B-204ENST00000506542 RPS6KA4O75676 772 aa17.98■□□□□ 0.47
SERF1B-204ENST00000506542 RC3H1Q5TC82 1133 aaKnown RBP17.98■□□□□ 0.47
SERF1B-204ENST00000506542 KLHL34Q8N239 644 aa17.98■□□□□ 0.47
SERF1B-204ENST00000506542 CCDC87Q9NVE4 849 aa17.98■□□□□ 0.47
SERF1B-204ENST00000506542 CANXP27824 592 aaKnown RBP17.97■□□□□ 0.47
SERF1B-204ENST00000506542 FKBP8Q14318 412 aa17.97■□□□□ 0.47
SERF1B-204ENST00000506542 TRAPPC3LQ5T215 181 aa17.97■□□□□ 0.47
SERF1B-204ENST00000506542 SLC16A10Q8TF71 515 aa17.97■□□□□ 0.47
SERF1B-204ENST00000506542 FMNL2Q96PY5 1086 aa17.97■□□□□ 0.47
SERF1B-204ENST00000506542 FHDC1Q9C0D6 1143 aaPredicted RBP17.97■□□□□ 0.47
SERF1B-204ENST00000506542 USP16Q9Y5T5 823 aa17.97■□□□□ 0.47
SERF1B-204ENST00000506542 IL16Q14005 1332 aa17.97■□□□□ 0.47
SERF1B-204ENST00000506542 ARXQ96QS3 562 aa17.96■□□□□ 0.47
SERF1B-204ENST00000506542 A1BGP04217 495 aa17.96■□□□□ 0.47
SERF1B-204ENST00000506542 LMOD3Q0VAK6 560 aa17.96■□□□□ 0.47
SERF1B-204ENST00000506542 VSIG10Q8N0Z9 540 aa17.96■□□□□ 0.47
SERF1B-204ENST00000506542 FLAD1Q8NFF5 587 aa17.96■□□□□ 0.47
SERF1B-204ENST00000506542 ZNF330Q9Y3S2 320 aaPredicted RBP17.95■□□□□ 0.46
SERF1B-204ENST00000506542 SOS1Q07889 1333 aaPredicted RBP17.95■□□□□ 0.46
SERF1B-204ENST00000506542 MYH16Q9H6N6 1097 aa17.94■□□□□ 0.46
SERF1B-204ENST00000506542 RFC4P35249 363 aa17.93■□□□□ 0.46
SERF1B-204ENST00000506542 LAS1LQ9Y4W2 734 aaKnown RBP17.93■□□□□ 0.46
SERF1B-204ENST00000506542 GYS1P13807 737 aa17.93■□□□□ 0.46
SERF1B-204ENST00000506542 POLD1P28340 1107 aa17.93■□□□□ 0.46
SERF1B-204ENST00000506542 COL15A1P39059 1388 aa17.92■□□□□ 0.46
SERF1B-204ENST00000506542 KRT24Q2M2I5 525 aa17.92■□□□□ 0.46
SERF1B-204ENST00000506542 SYT17Q9BSW7 474 aa17.92■□□□□ 0.46
SERF1B-204ENST00000506542 TSPYL4Q9UJ04 414 aa17.92■□□□□ 0.46
SERF1B-204ENST00000506542 LAMB4A4D0S4 1761 aa17.92■□□□□ 0.46
SERF1B-204ENST00000506542 STARD3NLO95772 234 aa17.91■□□□□ 0.46
SERF1B-204ENST00000506542 EIF4A1P60842 406 aaKnown RBP17.91■□□□□ 0.46
SERF1B-204ENST00000506542 CALD1Q05682 793 aaKnown RBP17.91■□□□□ 0.46
SERF1B-204ENST00000506542 NLGN2Q8NFZ4 835 aa17.91■□□□□ 0.46
SERF1B-204ENST00000506542 MMP10P09238 476 aa17.9■□□□□ 0.46
SERF1B-204ENST00000506542 SNRPA1P09661 255 aaKnown RBP17.9■□□□□ 0.46
SERF1B-204ENST00000506542 RRP1P56182 461 aaKnown RBP17.9■□□□□ 0.46
SERF1B-204ENST00000506542 USPL1Q5W0Q7 1092 aa17.9■□□□□ 0.46
SERF1B-204ENST00000506542 USP42Q9H9J4 1324 aaKnown RBP17.9■□□□□ 0.46
SERF1B-204ENST00000506542 FANCIQ9NVI1 1328 aa17.9■□□□□ 0.46
SERF1B-204ENST00000506542 ADRA2BP18089 450 aa17.9■□□□□ 0.46
SERF1B-204ENST00000506542 HMGB2P26583 209 aaKnown RBP17.9■□□□□ 0.46
SERF1B-204ENST00000506542 NBPF26B4DH59 902 aa17.89■□□□□ 0.45
SERF1B-204ENST00000506542 IRX6P78412 446 aaPredicted RBP17.89■□□□□ 0.45
SERF1B-204ENST00000506542 NBPF10Q6P3W6 841 aaKnown RBP17.89■□□□□ 0.45
SERF1B-204ENST00000506542 NBPF15Q8N660 670 aa17.89■□□□□ 0.45
SERF1B-204ENST00000506542 TBC1D2BQ9UPU7 963 aa17.89■□□□□ 0.45
SERF1B-204ENST00000506542 GIGYF1O75420 1035 aaPredicted RBP17.88■□□□□ 0.45
SERF1B-204ENST00000506542 EIF5P55010 431 aaKnown RBP17.88■□□□□ 0.45
SERF1B-204ENST00000506542 BCL2L12Q9HB09 334 aa17.88■□□□□ 0.45
SERF1B-204ENST00000506542 WWC3Q9ULE0 1092 aa17.88■□□□□ 0.45
SERF1B-204ENST00000506542 ERICH6BQ5W0A0 696 aa17.87■□□□□ 0.45
SERF1B-204ENST00000506542 TSR2Q969E8 191 aaKnown RBP17.87■□□□□ 0.45
SERF1B-204ENST00000506542 NECTIN2Q92692 538 aa17.87■□□□□ 0.45
SERF1B-204ENST00000506542 TEX13AQ9BXU3 409 aaPredicted RBP17.87■□□□□ 0.45
SERF1B-204ENST00000506542 IFT57Q9NWB7 429 aa17.87■□□□□ 0.45
SERF1B-204ENST00000506542 CHL1O00533 1208 aa17.86■□□□□ 0.45
SERF1B-204ENST00000506542 ZNF853P0CG23 659 aa17.86■□□□□ 0.45
SERF1B-204ENST00000506542 KCNA4P22459 653 aa17.86■□□□□ 0.45
SERF1B-204ENST00000506542 GNAI1P63096 354 aa17.86■□□□□ 0.45
SERF1B-204ENST00000506542 DDR1Q08345 913 aa17.86■□□□□ 0.45
SERF1B-204ENST00000506542 SCN7AQ01118 1682 aa17.85■□□□□ 0.45
SERF1B-204ENST00000506542 ZPR1O75312 459 aa17.85■□□□□ 0.45
SERF1B-204ENST00000506542 NARFQ9UHQ1 456 aa17.85■□□□□ 0.45
SERF1B-204ENST00000506542 ANXA1P04083 346 aa17.84■□□□□ 0.45
SERF1B-204ENST00000506542 CT47B1P0C2W7 299 aaPredicted RBP17.84■□□□□ 0.45
SERF1B-204ENST00000506542 BICDL1Q6ZP65 573 aa17.84■□□□□ 0.45
SERF1B-204ENST00000506542 MBIPQ9NS73 344 aa17.84■□□□□ 0.45
SERF1B-204ENST00000506542 AFDNP55196 1824 aaKnown RBP17.84■□□□□ 0.45
SERF1B-204ENST00000506542 BCORQ6W2J9 1755 aa17.84■□□□□ 0.45
SERF1B-204ENST00000506542 N4BP2Q86UW6 1770 aaPredicted RBP17.84■□□□□ 0.45
SERF1B-204ENST00000506542 MYL6BP14649 208 aa17.83■□□□□ 0.45
SERF1B-204ENST00000506542 EIF2S2P20042 333 aaKnown RBP17.83■□□□□ 0.45
SERF1B-204ENST00000506542 IL6STP40189 918 aaPredicted RBP17.83■□□□□ 0.45
SERF1B-204ENST00000506542 NLGN1Q8N2Q7 840 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms