RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 GFRA3O60609 400 aa10.36□□□□□ -0.75
HERC4-213ENST00000506515 NOS2P35228 1153 aa10.36□□□□□ -0.75
HERC4-213ENST00000506515 PKDCCQ504Y2 493 aa10.36□□□□□ -0.75
HERC4-213ENST00000506515 SH3PXD2AQ5TCZ1 1133 aa10.36□□□□□ -0.75
HERC4-213ENST00000506515 MRPL14Q6P1L8 145 aaKnown RBP10.36□□□□□ -0.75
HERC4-213ENST00000506515 STAG2Q8N3U4 1231 aa10.36□□□□□ -0.75
HERC4-213ENST00000506515 NGLY1Q96IV0 654 aa10.36□□□□□ -0.75
HERC4-213ENST00000506515 GRIP2Q9C0E4 1043 aa10.36□□□□□ -0.75
HERC4-213ENST00000506515 TUT1Q9H6E5 874 aaKnown RBP10.36□□□□□ -0.75
HERC4-213ENST00000506515 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.36□□□□□ -0.75
HERC4-213ENST00000506515 GPC1P35052 558 aa10.35□□□□□ -0.75
HERC4-213ENST00000506515 RNF144AP50876 292 aaPredicted RBP10.35□□□□□ -0.75
HERC4-213ENST00000506515 TEAD4Q15561 434 aa10.35□□□□□ -0.75
HERC4-213ENST00000506515 ZDHHC1Q8WTX9 485 aa10.35□□□□□ -0.75
HERC4-213ENST00000506515 L3MBTL2Q969R5 705 aa10.35□□□□□ -0.75
HERC4-213ENST00000506515 NIFKQ9BYG3 293 aaKnown RBP10.35□□□□□ -0.75
HERC4-213ENST00000506515 EGFL7Q9UHF1 273 aa10.35□□□□□ -0.75
HERC4-213ENST00000506515 HCN4Q9Y3Q4 1203 aa10.35□□□□□ -0.75
HERC4-213ENST00000506515 AVPP01185 164 aa10.34□□□□□ -0.75
HERC4-213ENST00000506515 BMP1P13497 986 aa10.34□□□□□ -0.75
HERC4-213ENST00000506515 GNASQ5JWF2 1037 aa10.34□□□□□ -0.75
HERC4-213ENST00000506515 FOXD4L5Q5VV16 416 aaPredicted RBP10.34□□□□□ -0.75
HERC4-213ENST00000506515 GLYCTKQ8IVS8 523 aa10.34□□□□□ -0.75
HERC4-213ENST00000506515 RHBDD1Q8TEB9 315 aa10.34□□□□□ -0.75
HERC4-213ENST00000506515 SAP130Q9H0E3 1048 aa10.34□□□□□ -0.75
HERC4-213ENST00000506515 EML1O00423 815 aa10.33□□□□□ -0.76
HERC4-213ENST00000506515 ICMTO60725 284 aa10.33□□□□□ -0.76
HERC4-213ENST00000506515 C16orf46Q6P387 395 aa10.33□□□□□ -0.76
HERC4-213ENST00000506515 ZNF295-AS1Q8N0V1 137 aa10.33□□□□□ -0.76
HERC4-213ENST00000506515 DGAT1O75907 488 aa10.32□□□□□ -0.76
HERC4-213ENST00000506515 PHKA2P46019 1235 aa10.32□□□□□ -0.76
HERC4-213ENST00000506515 PLA2G4AP47712 749 aa10.32□□□□□ -0.76
HERC4-213ENST00000506515 FKBP4Q02790 459 aaKnown RBP eCLIP10.32□□□□□ -0.76
HERC4-213ENST00000506515 PRICKLE2Q7Z3G6 844 aa10.32□□□□□ -0.76
HERC4-213ENST00000506515 HELQQ8TDG4 1101 aa10.32□□□□□ -0.76
HERC4-213ENST00000506515 NRG2O14511 850 aaPredicted RBP10.31□□□□□ -0.76
HERC4-213ENST00000506515 SCARF1Q14162 830 aa10.31□□□□□ -0.76
HERC4-213ENST00000506515 C4orf17Q53FE4 359 aa10.31□□□□□ -0.76
HERC4-213ENST00000506515 COX20Q5RI15 118 aa10.31□□□□□ -0.76
HERC4-213ENST00000506515 ALDH16A1Q8IZ83 802 aa10.31□□□□□ -0.76
HERC4-213ENST00000506515 QTRT2Q9H974 415 aaKnown RBP10.31□□□□□ -0.76
HERC4-213ENST00000506515 AXIN1O15169 862 aa10.3□□□□□ -0.76
HERC4-213ENST00000506515 POU4F2Q12837 409 aa10.3□□□□□ -0.76
HERC4-213ENST00000506515 SF3B2Q13435 895 aaKnown RBP10.3□□□□□ -0.76
HERC4-213ENST00000506515 CTC1Q2NKJ3 1217 aa10.3□□□□□ -0.76
HERC4-213ENST00000506515 POTEAQ6S8J7 498 aa10.3□□□□□ -0.76
HERC4-213ENST00000506515 TRIM46Q7Z4K8 759 aa10.3□□□□□ -0.76
HERC4-213ENST00000506515 RNF217Q8TC41 542 aa10.3□□□□□ -0.76
HERC4-213ENST00000506515 AIDAQ96BJ3 306 aa10.3□□□□□ -0.76
HERC4-213ENST00000506515 TTLL8A6PVC2 850 aa10.29□□□□□ -0.76
HERC4-213ENST00000506515 HIRAP54198 1017 aaPredicted RBP10.29□□□□□ -0.76
HERC4-213ENST00000506515 PHACTR1Q9C0D0 580 aa10.29□□□□□ -0.76
HERC4-213ENST00000506515 LRFN2Q9ULH4 789 aa10.29□□□□□ -0.76
HERC4-213ENST00000506515 FIGNL2A6NMB9 653 aa10.28□□□□□ -0.76
HERC4-213ENST00000506515 TXLNAP40222 546 aa10.28□□□□□ -0.76
HERC4-213ENST00000506515 SMCPP49901 116 aaPredicted RBP10.28□□□□□ -0.76
HERC4-213ENST00000506515 LYSMD3Q7Z3D4 306 aa10.28□□□□□ -0.76
HERC4-213ENST00000506515 SPATA31C2B4DYI2 1134 aa10.27□□□□□ -0.77
HERC4-213ENST00000506515 MPSTP25325 297 aa10.27□□□□□ -0.77
HERC4-213ENST00000506515 RGS22Q8NE09 1264 aa10.27□□□□□ -0.77
HERC4-213ENST00000506515 ZFP42Q96MM3 310 aa10.27□□□□□ -0.77
HERC4-213ENST00000506515 RHOQP17081 205 aa10.26□□□□□ -0.77
HERC4-213ENST00000506515 NBPF10Q6P3W6 841 aaKnown RBP10.26□□□□□ -0.77
HERC4-213ENST00000506515 MYO19Q96H55 970 aa10.26□□□□□ -0.77
HERC4-213ENST00000506515 TNFRSF10BO14763 440 aa10.25□□□□□ -0.77
HERC4-213ENST00000506515 ST8SIA5O15466 376 aa10.25□□□□□ -0.77
HERC4-213ENST00000506515 FAM13AO94988 1023 aa10.25□□□□□ -0.77
HERC4-213ENST00000506515 MARSP56192 900 aaKnown RBP10.25□□□□□ -0.77
HERC4-213ENST00000506515 DGKZQ13574 1117 aa10.25□□□□□ -0.77
HERC4-213ENST00000506515 ECM1Q16610 540 aa10.25□□□□□ -0.77
HERC4-213ENST00000506515 RTN1Q16799 776 aa10.25□□□□□ -0.77
HERC4-213ENST00000506515 NBPF1Q3BBV0 1214 aa10.25□□□□□ -0.77
HERC4-213ENST00000506515 KLK14Q9P0G3 267 aa10.25□□□□□ -0.77
HERC4-213ENST00000506515 STIM2Q9P246 746 aa10.25□□□□□ -0.77
HERC4-213ENST00000506515 SOS2Q07890 1332 aaPredicted RBP10.25□□□□□ -0.77
HERC4-213ENST00000506515 ARHGAP4P98171 946 aa10.24□□□□□ -0.77
HERC4-213ENST00000506515 FOXD4L4Q8WXT5 416 aaPredicted RBP10.24□□□□□ -0.77
HERC4-213ENST00000506515 BRD2P25440 801 aaKnown RBP10.23□□□□□ -0.77
HERC4-213ENST00000506515 AAMPQ13685 434 aa10.23□□□□□ -0.77
HERC4-213ENST00000506515 C11orf91Q3C1V1 193 aa10.23□□□□□ -0.77
HERC4-213ENST00000506515 C1orf53Q5VUE5 145 aa10.23□□□□□ -0.77
HERC4-213ENST00000506515 CRIPAKQ8N1N5 446 aa10.23□□□□□ -0.77
HERC4-213ENST00000506515 RHPN1Q8TCX5 695 aa10.23□□□□□ -0.77
HERC4-213ENST00000506515 NPR3P17342 541 aa10.22□□□□□ -0.77
HERC4-213ENST00000506515 TATP17735 454 aaPredicted RBP10.22□□□□□ -0.77
HERC4-213ENST00000506515 MAPK1P28482 360 aa10.22□□□□□ -0.77
HERC4-213ENST00000506515 LAPTM4AQ15012 233 aa10.22□□□□□ -0.77
HERC4-213ENST00000506515 TIMMDC1Q9NPL8 285 aa10.22□□□□□ -0.77
HERC4-213ENST00000506515 AAASQ9NRG9 546 aa10.22□□□□□ -0.77
HERC4-213ENST00000506515 EIF1AXP47813 144 aaKnown RBP10.21□□□□□ -0.77
HERC4-213ENST00000506515 NOM1Q5C9Z4 860 aaKnown RBP10.21□□□□□ -0.77
HERC4-213ENST00000506515 FAM26DQ5JW98 314 aa10.21□□□□□ -0.77
HERC4-213ENST00000506515 BICDL1Q6ZP65 573 aa10.21□□□□□ -0.77
HERC4-213ENST00000506515 ABTB2Q8N961 1025 aa10.21□□□□□ -0.77
HERC4-213ENST00000506515 ATP13A2Q9NQ11 1180 aa10.21□□□□□ -0.77
HERC4-213ENST00000506515 ZDHHC3Q9NYG2 299 aa10.21□□□□□ -0.77
HERC4-213ENST00000506515 DNMT3LQ9UJW3 386 aa10.21□□□□□ -0.77
HERC4-213ENST00000506515 ZBTB39O15060 712 aa10.2□□□□□ -0.78
HERC4-213ENST00000506515 WDR44Q5JSH3 913 aa10.2□□□□□ -0.78
HERC4-213ENST00000506515 IFT43Q96FT9 208 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms