RNA–Protein interactions for RNA: ENST00000506443.5

COPS4-204, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 4

Gene COPS4, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-204ENST00000506443 SPG7Q9UQ90 795 aa12.5□□□□□ -0.41
COPS4-204ENST00000506443 USP42Q9H9J4 1324 aaKnown RBP12.5□□□□□ -0.41
COPS4-204ENST00000506443 VIRMAQ69YN4 1812 aaKnown RBP12.5□□□□□ -0.41
COPS4-204ENST00000506443 KDM2BQ8NHM5 1336 aa12.49□□□□□ -0.41
COPS4-204ENST00000506443 POTEIP0CG38 1075 aa12.49□□□□□ -0.41
COPS4-204ENST00000506443 POTEJP0CG39 1038 aa12.49□□□□□ -0.41
COPS4-204ENST00000506443 DALRD3Q5D0E6 543 aaKnown RBP12.49□□□□□ -0.41
COPS4-204ENST00000506443 SMC1BQ8NDV3 1235 aa12.49□□□□□ -0.41
COPS4-204ENST00000506443 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.49□□□□□ -0.41
COPS4-204ENST00000506443 PIM2Q9P1W9 311 aa12.49□□□□□ -0.41
COPS4-204ENST00000506443 POTECB2RU33 542 aa12.48□□□□□ -0.41
COPS4-204ENST00000506443 POLRMTO00411 1230 aaKnown RBP12.48□□□□□ -0.41
COPS4-204ENST00000506443 PITPNM1O00562 1244 aa12.48□□□□□ -0.41
COPS4-204ENST00000506443 PTCD1O75127 700 aaKnown RBP12.48□□□□□ -0.41
COPS4-204ENST00000506443 RPS6KA4O75676 772 aa12.48□□□□□ -0.41
COPS4-204ENST00000506443 RFC4P35249 363 aa12.48□□□□□ -0.41
COPS4-204ENST00000506443 CRKLP46109 303 aaKnown RBP12.48□□□□□ -0.41
COPS4-204ENST00000506443 EIF4A2Q14240 407 aaKnown RBP12.48□□□□□ -0.41
COPS4-204ENST00000506443 IFNL2Q8IZJ0 200 aa12.48□□□□□ -0.41
COPS4-204ENST00000506443 SCN11AQ9UI33 1791 aa12.48□□□□□ -0.41
COPS4-204ENST00000506443 WASHC2AQ641Q2 1341 aa12.47□□□□□ -0.41
COPS4-204ENST00000506443 TNNT2P45379 298 aaPredicted RBP12.47□□□□□ -0.41
COPS4-204ENST00000506443 AEBP1Q8IUX7 1158 aa12.47□□□□□ -0.41
COPS4-204ENST00000506443 MKRN1Q9UHC7 482 aaKnown RBP12.47□□□□□ -0.41
COPS4-204ENST00000506443 NFKBIEO00221 500 aa12.46□□□□□ -0.41
COPS4-204ENST00000506443 DICER1Q9UPY3 1922 aaKnown RBP12.45□□□□□ -0.42
COPS4-204ENST00000506443 POLKQ9UBT6 870 aa12.45□□□□□ -0.42
COPS4-204ENST00000506443 FER1L6Q2WGJ9 1857 aa12.44□□□□□ -0.42
COPS4-204ENST00000506443 FOXN1O15353 648 aa12.44□□□□□ -0.42
COPS4-204ENST00000506443 RC3H1Q5TC82 1133 aaKnown RBP12.44□□□□□ -0.42
COPS4-204ENST00000506443 USPL1Q5W0Q7 1092 aa12.44□□□□□ -0.42
COPS4-204ENST00000506443 ZNF530Q6P9A1 599 aaPredicted RBP12.44□□□□□ -0.42
COPS4-204ENST00000506443 INTS5Q6P9B9 1019 aaKnown RBP12.44□□□□□ -0.42
COPS4-204ENST00000506443 SCN7AQ01118 1682 aa12.43□□□□□ -0.42
COPS4-204ENST00000506443 GLTPD2A6NH11 291 aa12.43□□□□□ -0.42
COPS4-204ENST00000506443 DNAJC10Q8IXB1 793 aa12.43□□□□□ -0.42
COPS4-204ENST00000506443 CCDC24Q8N4L8 307 aa12.43□□□□□ -0.42
COPS4-204ENST00000506443 SP7Q8TDD2 431 aaPredicted RBP12.43□□□□□ -0.42
COPS4-204ENST00000506443 BCL2L12Q9HB09 334 aa12.43□□□□□ -0.42
COPS4-204ENST00000506443 TM4SF1P30408 202 aa12.42□□□□□ -0.42
COPS4-204ENST00000506443 NFIXQ14938 502 aa12.42□□□□□ -0.42
COPS4-204ENST00000506443 SOS1Q07889 1333 aaPredicted RBP12.41□□□□□ -0.42
COPS4-204ENST00000506443 SLC34A2O95436 690 aa12.41□□□□□ -0.42
COPS4-204ENST00000506443 CDCA8Q53HL2 280 aa12.41□□□□□ -0.42
COPS4-204ENST00000506443 SLX4Q8IY92 1834 aa12.41□□□□□ -0.42
COPS4-204ENST00000506443 UBR2Q8IWV8 1755 aa12.41□□□□□ -0.42
COPS4-204ENST00000506443 ERVV-2B6SEH9 535 aa12.4□□□□□ -0.42
COPS4-204ENST00000506443 VEGFAP15692 232 aaPredicted RBP12.4□□□□□ -0.42
COPS4-204ENST00000506443 LMNB1P20700 586 aa12.4□□□□□ -0.42
COPS4-204ENST00000506443 FXR2P51116 673 aaKnown RBP eCLIP12.4□□□□□ -0.42
COPS4-204ENST00000506443 CABP4P57796 275 aa12.4□□□□□ -0.42
COPS4-204ENST00000506443 ZBTB1Q9Y2K1 713 aa12.4□□□□□ -0.42
COPS4-204ENST00000506443 COL15A1P39059 1388 aa12.4□□□□□ -0.42
COPS4-204ENST00000506443 MRC1P22897 1456 aa12.4□□□□□ -0.43
COPS4-204ENST00000506443 SPDYE2BA6NHP3 402 aa12.39□□□□□ -0.43
COPS4-204ENST00000506443 SPDYE6P0CI01 402 aa12.39□□□□□ -0.43
COPS4-204ENST00000506443 SLC39A6Q13433 755 aa12.39□□□□□ -0.43
COPS4-204ENST00000506443 SPDYE2Q495Y8 402 aa12.39□□□□□ -0.43
COPS4-204ENST00000506443 NFATC2IPQ8NCF5 419 aa12.39□□□□□ -0.43
COPS4-204ENST00000506443 ADAMTSL1Q8N6G6 1762 aa12.38□□□□□ -0.43
COPS4-204ENST00000506443 ARFGEF2Q9Y6D5 1785 aa12.38□□□□□ -0.43
COPS4-204ENST00000506443 FAM161AQ3B820 660 aa12.38□□□□□ -0.43
COPS4-204ENST00000506443 C2CD5Q86YS7 1000 aa12.38□□□□□ -0.43
COPS4-204ENST00000506443 CNTNAP1P78357 1384 aa12.38□□□□□ -0.43
COPS4-204ENST00000506443 ZC3H4Q9UPT8 1303 aaKnown RBP12.37□□□□□ -0.43
COPS4-204ENST00000506443 HAX1O00165 279 aa12.37□□□□□ -0.43
COPS4-204ENST00000506443 BICDL1Q6ZP65 573 aa12.37□□□□□ -0.43
COPS4-204ENST00000506443 DDNO94850 711 aaPredicted RBP12.36□□□□□ -0.43
COPS4-204ENST00000506443 SERPINB2P05120 415 aa12.36□□□□□ -0.43
COPS4-204ENST00000506443 BCORQ6W2J9 1755 aa12.35□□□□□ -0.43
COPS4-204ENST00000506443 C21orf2O43822 256 aa12.35□□□□□ -0.43
COPS4-204ENST00000506443 MTHFSP49914 203 aa12.35□□□□□ -0.43
COPS4-204ENST00000506443 TTLL6Q8N841 843 aa12.35□□□□□ -0.43
COPS4-204ENST00000506443 POLR3GLQ9BT43 218 aa12.35□□□□□ -0.43
COPS4-204ENST00000506443 LGR6Q9HBX8 967 aa12.35□□□□□ -0.43
COPS4-204ENST00000506443 THSD7BQ9C0I4 1608 aa12.34□□□□□ -0.43
COPS4-204ENST00000506443 ZPR1O75312 459 aa12.34□□□□□ -0.43
COPS4-204ENST00000506443 HSP90AB1P08238 724 aaKnown RBP12.34□□□□□ -0.43
COPS4-204ENST00000506443 CYP19A1P11511 503 aaPredicted RBP12.34□□□□□ -0.43
COPS4-204ENST00000506443 VEGFBP49765 207 aa12.34□□□□□ -0.43
COPS4-204ENST00000506443 LBX1P52954 281 aa12.34□□□□□ -0.43
COPS4-204ENST00000506443 PLEKHO1Q53GL0 409 aaPredicted RBP12.34□□□□□ -0.43
COPS4-204ENST00000506443 CHADLQ6NUI6 762 aa12.34□□□□□ -0.43
COPS4-204ENST00000506443 SLC51AQ86UW1 340 aa12.34□□□□□ -0.43
COPS4-204ENST00000506443 CREBZFQ9NS37 354 aa12.34□□□□□ -0.43
COPS4-204ENST00000506443 PASKQ96RG2 1323 aa12.34□□□□□ -0.43
COPS4-204ENST00000506443 ZNF541Q9H0D2 1346 aa12.34□□□□□ -0.43
COPS4-204ENST00000506443 LTBP1Q14766 1721 aa12.34□□□□□ -0.43
COPS4-204ENST00000506443 COL4A5P29400 1685 aa12.33□□□□□ -0.44
COPS4-204ENST00000506443 ERFEQ4G0M1 354 aa12.33□□□□□ -0.44
COPS4-204ENST00000506443 OLFM4Q6UX06 510 aa12.33□□□□□ -0.44
COPS4-204ENST00000506443 NARFQ9UHQ1 456 aa12.33□□□□□ -0.44
COPS4-204ENST00000506443 CANXP27824 592 aaKnown RBP12.32□□□□□ -0.44
COPS4-204ENST00000506443 FMR1Q06787 632 aaKnown RBP eCLIP12.32□□□□□ -0.44
COPS4-204ENST00000506443 MKRN4PQ13434 485 aaPredicted RBP12.32□□□□□ -0.44
COPS4-204ENST00000506443 AMOTQ4VCS5 1084 aa12.32□□□□□ -0.44
COPS4-204ENST00000506443 TBC1D9BQ66K14 1250 aa12.32□□□□□ -0.44
COPS4-204ENST00000506443 SCN4AP35499 1836 aa12.32□□□□□ -0.44
COPS4-204ENST00000506443 SIPA1L3O60292 1781 aaPredicted RBP12.31□□□□□ -0.44
COPS4-204ENST00000506443 HSPA8P11142 646 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms