RNA–Protein interactions for RNA: ENST00000506388.2

RCN1-202, Transcript of reticulocalbin 1, humanhuman

TSL 1 (best)

Gene RCN1, Length 1,658 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-202ENST00000506388 SSH1Q8WYL5 1049 aa17.13■□□□□ 0.33
RCN1-202ENST00000506388 RNF123Q5XPI4 1314 aa17.13■□□□□ 0.33
RCN1-202ENST00000506388 MYH14Q7Z406 1995 aaKnown RBP17.13■□□□□ 0.33
RCN1-202ENST00000506388 APBA3O96018 575 aa17.13■□□□□ 0.33
RCN1-202ENST00000506388 DNAJC10Q8IXB1 793 aa17.13■□□□□ 0.33
RCN1-202ENST00000506388 STK31Q9BXU1 1019 aa17.13■□□□□ 0.33
RCN1-202ENST00000506388 DDX21Q9NR30 783 aaKnown RBP eCLIP17.13■□□□□ 0.33
RCN1-202ENST00000506388 ITPK1Q13572 414 aa17.12■□□□□ 0.33
RCN1-202ENST00000506388 PDIA6Q15084 440 aa17.12■□□□□ 0.33
RCN1-202ENST00000506388 RC3H1Q5TC82 1133 aaKnown RBP17.12■□□□□ 0.33
RCN1-202ENST00000506388 CCNL1Q9UK58 526 aaPredicted RBP17.12■□□□□ 0.33
RCN1-202ENST00000506388 LRP10Q7Z4F1 713 aa17.11■□□□□ 0.33
RCN1-202ENST00000506388 PELP1Q8IZL8 1130 aaKnown RBP17.11■□□□□ 0.33
RCN1-202ENST00000506388 MRPL50Q8N5N7 158 aaKnown RBP17.11■□□□□ 0.33
RCN1-202ENST00000506388 ARHGAP45Q92619 1136 aa17.11■□□□□ 0.33
RCN1-202ENST00000506388 CNTNAP4Q9C0A0 1308 aa17.11■□□□□ 0.33
RCN1-202ENST00000506388 PROM2Q8N271 834 aa17.1■□□□□ 0.33
RCN1-202ENST00000506388 HYPKQ9NX55 129 aa17.1■□□□□ 0.33
RCN1-202ENST00000506388 KIF16BQ96L93 1317 aa17.1■□□□□ 0.33
RCN1-202ENST00000506388 C4BP0C0L5 1744 aa17.1■□□□□ 0.33
RCN1-202ENST00000506388 SLC4A2P04920 1241 aa17.1■□□□□ 0.33
RCN1-202ENST00000506388 EIF2S2P20042 333 aaKnown RBP17.1■□□□□ 0.33
RCN1-202ENST00000506388 TXNRD1Q16881 649 aa17.1■□□□□ 0.33
RCN1-202ENST00000506388 SMC4Q9NTJ3 1288 aa17.1■□□□□ 0.33
RCN1-202ENST00000506388 CAMKK2Q96RR4 588 aa17.09■□□□□ 0.33
RCN1-202ENST00000506388 CHPF2Q9P2E5 772 aa17.09■□□□□ 0.33
RCN1-202ENST00000506388 NBPF26B4DH59 902 aa17.08■□□□□ 0.32
RCN1-202ENST00000506388 BCAR3O75815 825 aa17.08■□□□□ 0.32
RCN1-202ENST00000506388 PTPRCP08575 1304 aa17.08■□□□□ 0.32
RCN1-202ENST00000506388 IL6STP40189 918 aaPredicted RBP17.08■□□□□ 0.32
RCN1-202ENST00000506388 BAG6P46379 1132 aa17.08■□□□□ 0.32
RCN1-202ENST00000506388 SF3B2Q13435 895 aaKnown RBP17.08■□□□□ 0.32
RCN1-202ENST00000506388 NBPF14Q5TI25 921 aa17.08■□□□□ 0.32
RCN1-202ENST00000506388 NBPF10Q6P3W6 841 aaKnown RBP17.08■□□□□ 0.32
RCN1-202ENST00000506388 INTS5Q6P9B9 1019 aaKnown RBP17.08■□□□□ 0.32
RCN1-202ENST00000506388 NBPF15Q8N660 670 aa17.08■□□□□ 0.32
RCN1-202ENST00000506388 LRRC4BQ9NT99 713 aa17.08■□□□□ 0.32
RCN1-202ENST00000506388 LINC00116Q8NCU8 138 aa17.07■□□□□ 0.32
RCN1-202ENST00000506388 CCDC87Q9NVE4 849 aa17.07■□□□□ 0.32
RCN1-202ENST00000506388 IPO8O15397 1037 aaKnown RBP17.07■□□□□ 0.32
RCN1-202ENST00000506388 CRKLP46109 303 aaKnown RBP17.07■□□□□ 0.32
RCN1-202ENST00000506388 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.07■□□□□ 0.32
RCN1-202ENST00000506388 UBR3Q6ZT12 1888 aa17.06■□□□□ 0.32
RCN1-202ENST00000506388 RGL2O15211 777 aa17.06■□□□□ 0.32
RCN1-202ENST00000506388 A1BGP04217 495 aa17.06■□□□□ 0.32
RCN1-202ENST00000506388 EIF5P55010 431 aaKnown RBP17.05■□□□□ 0.32
RCN1-202ENST00000506388 FLIIQ13045 1269 aa17.04■□□□□ 0.32
RCN1-202ENST00000506388 PROSER3Q2NL68 480 aa17.04■□□□□ 0.32
RCN1-202ENST00000506388 ZBTB1Q9Y2K1 713 aa17.04■□□□□ 0.32
RCN1-202ENST00000506388 N4BP2Q86UW6 1770 aaPredicted RBP17.04■□□□□ 0.32
RCN1-202ENST00000506388 QSER1Q2KHR3 1735 aa17.04■□□□□ 0.32
RCN1-202ENST00000506388 NUP188Q5SRE5 1749 aa17.04■□□□□ 0.32
RCN1-202ENST00000506388 RPS6KA4O75676 772 aa17.04■□□□□ 0.32
RCN1-202ENST00000506388 MS4A1P11836 297 aa17.04■□□□□ 0.32
RCN1-202ENST00000506388 RRP1P56182 461 aaKnown RBP17.04■□□□□ 0.32
RCN1-202ENST00000506388 ZKSCAN2Q63HK3 967 aa17.04■□□□□ 0.32
RCN1-202ENST00000506388 NECTIN2Q92692 538 aa17.04■□□□□ 0.32
RCN1-202ENST00000506388 UPF1Q92900 1129 aaKnown RBP eCLIP17.04■□□□□ 0.32
RCN1-202ENST00000506388 BCL2L13Q9BXK5 485 aa17.04■□□□□ 0.32
RCN1-202ENST00000506388 PDE3AQ14432 1141 aa17.03■□□□□ 0.32
RCN1-202ENST00000506388 ATF7IPQ6VMQ6 1270 aa17.03■□□□□ 0.32
RCN1-202ENST00000506388 G2E3Q7L622 706 aa17.03■□□□□ 0.32
RCN1-202ENST00000506388 NOB1Q9ULX3 412 aaKnown RBP17.03■□□□□ 0.32
RCN1-202ENST00000506388 IBTKQ9P2D0 1353 aaPredicted RBP17.02■□□□□ 0.32
RCN1-202ENST00000506388 ADRA2BP18089 450 aa17.02■□□□□ 0.32
RCN1-202ENST00000506388 EN1Q05925 392 aaPredicted RBP17.02■□□□□ 0.32
RCN1-202ENST00000506388 API5Q9BZZ5 524 aaKnown RBP17.02■□□□□ 0.32
RCN1-202ENST00000506388 PXDNLA1KZ92 1463 aa17.02■□□□□ 0.31
RCN1-202ENST00000506388 TCERG1O14776 1098 aaKnown RBP17.01■□□□□ 0.31
RCN1-202ENST00000506388 DDX58O95786 925 aaKnown RBP17.01■□□□□ 0.31
RCN1-202ENST00000506388 PHAXQ9H814 394 aaKnown RBP17.01■□□□□ 0.31
RCN1-202ENST00000506388 SUPT16HQ9Y5B9 1047 aaKnown RBP17.01■□□□□ 0.31
RCN1-202ENST00000506388 A0A087WZG4 1122 aa17.01■□□□□ 0.31
RCN1-202ENST00000506388 MYL6BP14649 208 aa17.01■□□□□ 0.31
RCN1-202ENST00000506388 KCNQ4P56696 695 aa17.01■□□□□ 0.31
RCN1-202ENST00000506388 EZH2Q15910 746 aaKnown RBP17.01■□□□□ 0.31
RCN1-202ENST00000506388 COPS6Q7L5N1 327 aa17.01■□□□□ 0.31
RCN1-202ENST00000506388 AKT1S1Q96B36 256 aa17.01■□□□□ 0.31
RCN1-202ENST00000506388 ARFGEF2Q9Y6D5 1785 aa17■□□□□ 0.31
RCN1-202ENST00000506388 BCORQ6W2J9 1755 aa17■□□□□ 0.31
RCN1-202ENST00000506388 ANXA1P04083 346 aa17■□□□□ 0.31
RCN1-202ENST00000506388 TRIM27P14373 513 aa17■□□□□ 0.31
RCN1-202ENST00000506388 CANXP27824 592 aaKnown RBP17■□□□□ 0.31
RCN1-202ENST00000506388 KSR2Q6VAB6 950 aa17■□□□□ 0.31
RCN1-202ENST00000506388 ABCC4O15439 1325 aa16.99■□□□□ 0.31
RCN1-202ENST00000506388 ERVV-1B6SEH8 477 aa16.99■□□□□ 0.31
RCN1-202ENST00000506388 SSFA2P28290 1259 aa16.99■□□□□ 0.31
RCN1-202ENST00000506388 FKBP5Q13451 457 aaPredicted RBP16.99■□□□□ 0.31
RCN1-202ENST00000506388 ANKRD13DQ6ZTN6 518 aa16.99■□□□□ 0.31
RCN1-202ENST00000506388 PLBD2Q8NHP8 589 aa16.99■□□□□ 0.31
RCN1-202ENST00000506388 XAGE3Q8WTP9 111 aa16.99■□□□□ 0.31
RCN1-202ENST00000506388 RTCBQ9Y3I0 505 aaKnown RBP16.99■□□□□ 0.31
RCN1-202ENST00000506388 COL15A1P39059 1388 aa16.99■□□□□ 0.31
RCN1-202ENST00000506388 C4AP0C0L4 1744 aa16.99■□□□□ 0.31
RCN1-202ENST00000506388 NUP98P52948 1817 aa16.99■□□□□ 0.31
RCN1-202ENST00000506388 ADCY9O60503 1353 aa16.98■□□□□ 0.31
RCN1-202ENST00000506388 ILDR2Q71H61 639 aa16.98■□□□□ 0.31
RCN1-202ENST00000506388 AK7Q96M32 723 aa16.98■□□□□ 0.31
RCN1-202ENST00000506388 TUBGCP6Q96RT7 1819 aa16.98■□□□□ 0.31
RCN1-202ENST00000506388 ATP10DQ9P241 1426 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms