RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 ARXQ96QS3 562 aa21.87■■□□□ 1.09
SNCA-209ENST00000506244 LAMB4A4D0S4 1761 aa21.87■■□□□ 1.09
SNCA-209ENST00000506244 SOS1Q07889 1333 aaPredicted RBP21.86■■□□□ 1.09
SNCA-209ENST00000506244 KCNQ3O43525 872 aa21.86■■□□□ 1.09
SNCA-209ENST00000506244 SNRPA1P09661 255 aaKnown RBP21.86■■□□□ 1.09
SNCA-209ENST00000506244 APAF1O14727 1248 aa21.85■■□□□ 1.09
SNCA-209ENST00000506244 MSL1Q68DK7 614 aa21.85■■□□□ 1.09
SNCA-209ENST00000506244 ARHGEF1Q92888 912 aaKnown RBP21.85■■□□□ 1.09
SNCA-209ENST00000506244 TSPYL4Q9UJ04 414 aa21.85■■□□□ 1.09
SNCA-209ENST00000506244 ZBTB1Q9Y2K1 713 aa21.85■■□□□ 1.09
SNCA-209ENST00000506244 COL15A1P39059 1388 aa21.85■■□□□ 1.09
SNCA-209ENST00000506244 CALD1Q05682 793 aaKnown RBP21.84■■□□□ 1.09
SNCA-209ENST00000506244 TRIM35Q9UPQ4 493 aa21.84■■□□□ 1.09
SNCA-209ENST00000506244 SMIM5Q71RC9 77 aa21.83■■□□□ 1.09
SNCA-209ENST00000506244 NPM2Q86SE8 214 aaKnown RBP21.83■■□□□ 1.09
SNCA-209ENST00000506244 MIS18AQ9NYP9 233 aa21.83■■□□□ 1.09
SNCA-209ENST00000506244 USP42Q9H9J4 1324 aaKnown RBP21.82■■□□□ 1.08
SNCA-209ENST00000506244 NLGN1Q8N2Q7 840 aa21.82■■□□□ 1.08
SNCA-209ENST00000506244 A0A087WZG4 1122 aa21.81■■□□□ 1.08
SNCA-209ENST00000506244 ZPR1O75312 459 aa21.8■■□□□ 1.08
SNCA-209ENST00000506244 CANXP27824 592 aaKnown RBP21.8■■□□□ 1.08
SNCA-209ENST00000506244 EIF4A1P60842 406 aaKnown RBP21.8■■□□□ 1.08
SNCA-209ENST00000506244 IL6STP40189 918 aaPredicted RBP21.79■■□□□ 1.08
SNCA-209ENST00000506244 FHDC1Q9C0D6 1143 aaPredicted RBP21.79■■□□□ 1.08
SNCA-209ENST00000506244 GYS1P13807 737 aa21.78■■□□□ 1.08
SNCA-209ENST00000506244 NCBP3Q53F19 620 aaKnown RBP21.78■■□□□ 1.08
SNCA-209ENST00000506244 SCN7AQ01118 1682 aa21.77■■□□□ 1.08
SNCA-209ENST00000506244 GIGYF1O75420 1035 aaPredicted RBP21.77■■□□□ 1.08
SNCA-209ENST00000506244 EIF5P55010 431 aaKnown RBP21.77■■□□□ 1.08
SNCA-209ENST00000506244 USP16Q9Y5T5 823 aa21.77■■□□□ 1.08
SNCA-209ENST00000506244 CHL1O00533 1208 aa21.76■■□□□ 1.07
SNCA-209ENST00000506244 CCDC27Q2M243 656 aa21.76■■□□□ 1.07
SNCA-209ENST00000506244 CFAP44Q96MT7 982 aa21.76■■□□□ 1.07
SNCA-209ENST00000506244 NARFQ9UHQ1 456 aa21.76■■□□□ 1.07
SNCA-209ENST00000506244 ZNF330Q9Y3S2 320 aaPredicted RBP21.76■■□□□ 1.07
SNCA-209ENST00000506244 LAS1LQ9Y4W2 734 aaKnown RBP21.76■■□□□ 1.07
SNCA-209ENST00000506244 PRAMEF22A3QJZ6 481 aa21.75■■□□□ 1.07
SNCA-209ENST00000506244 A1BGP04217 495 aa21.75■■□□□ 1.07
SNCA-209ENST00000506244 MMP10P09238 476 aa21.75■■□□□ 1.07
SNCA-209ENST00000506244 FAM9BQ8IZU0 186 aa21.75■■□□□ 1.07
SNCA-209ENST00000506244 KLHL34Q8N239 644 aa21.75■■□□□ 1.07
SNCA-209ENST00000506244 IFT57Q9NWB7 429 aa21.75■■□□□ 1.07
SNCA-209ENST00000506244 SRP68Q9UHB9 627 aaKnown RBP21.75■■□□□ 1.07
SNCA-209ENST00000506244 GNAI1P63096 354 aa21.74■■□□□ 1.07
SNCA-209ENST00000506244 SYT17Q9BSW7 474 aa21.74■■□□□ 1.07
SNCA-209ENST00000506244 ERBB4Q15303 1308 aa21.74■■□□□ 1.07
SNCA-209ENST00000506244 DCAF8L1A6NGE4 600 aa21.73■■□□□ 1.07
SNCA-209ENST00000506244 CCER2I3L3R5 266 aa21.73■■□□□ 1.07
SNCA-209ENST00000506244 USPL1Q5W0Q7 1092 aa21.73■■□□□ 1.07
SNCA-209ENST00000506244 PARP3Q9Y6F1 533 aa21.73■■□□□ 1.07
SNCA-209ENST00000506244 BCORQ6W2J9 1755 aa21.72■■□□□ 1.07
SNCA-209ENST00000506244 NGEFQ8N5V2 710 aa21.72■■□□□ 1.07
SNCA-209ENST00000506244 CD2APQ9Y5K6 639 aa21.72■■□□□ 1.07
SNCA-209ENST00000506244 FKBP8Q14318 412 aa21.71■■□□□ 1.07
SNCA-209ENST00000506244 HOXB7P09629 217 aa21.7■■□□□ 1.06
SNCA-209ENST00000506244 DIEXFQ68CQ4 756 aaKnown RBP21.7■■□□□ 1.06
SNCA-209ENST00000506244 DZIP3Q86Y13 1208 aaKnown RBP21.7■■□□□ 1.06
SNCA-209ENST00000506244 ZNF853P0CG23 659 aa21.69■■□□□ 1.06
SNCA-209ENST00000506244 WWC1Q8IX03 1113 aa21.69■■□□□ 1.06
SNCA-209ENST00000506244 MBIPQ9NS73 344 aa21.69■■□□□ 1.06
SNCA-209ENST00000506244 ZNF652Q9Y2D9 606 aa21.69■■□□□ 1.06
SNCA-209ENST00000506244 RGL2O15211 777 aa21.68■■□□□ 1.06
SNCA-209ENST00000506244 PIP4K2AP48426 406 aaPredicted RBP21.68■■□□□ 1.06
SNCA-209ENST00000506244 IL16Q14005 1332 aa21.68■■□□□ 1.06
SNCA-209ENST00000506244 C10orf71Q711Q0 1435 aa21.68■■□□□ 1.06
SNCA-209ENST00000506244 NBPF26B4DH59 902 aa21.67■■□□□ 1.06
SNCA-209ENST00000506244 NBPF10Q6P3W6 841 aaKnown RBP21.67■■□□□ 1.06
SNCA-209ENST00000506244 NBPF15Q8N660 670 aa21.67■■□□□ 1.06
SNCA-209ENST00000506244 TBC1D2BQ9UPU7 963 aa21.67■■□□□ 1.06
SNCA-209ENST00000506244 KIF13BQ9NQT8 1826 aa21.66■■□□□ 1.06
SNCA-209ENST00000506244 CAMTA2O94983 1202 aa21.66■■□□□ 1.06
SNCA-209ENST00000506244 EIF2S2P20042 333 aaKnown RBP21.65■■□□□ 1.06
SNCA-209ENST00000506244 BCL2L12Q9HB09 334 aa21.65■■□□□ 1.06
SNCA-209ENST00000506244 CARMIL3Q8ND23 1372 aa21.64■■□□□ 1.06
SNCA-209ENST00000506244 POLRMTO00411 1230 aaKnown RBP21.64■■□□□ 1.05
SNCA-209ENST00000506244 TM4SF1P30408 202 aa21.64■■□□□ 1.05
SNCA-209ENST00000506244 DDR1Q08345 913 aa21.64■■□□□ 1.05
SNCA-209ENST00000506244 NFIXQ14938 502 aa21.64■■□□□ 1.05
SNCA-209ENST00000506244 CLEC4GQ6UXB4 293 aa21.64■■□□□ 1.05
SNCA-209ENST00000506244 KIF6Q6ZMV9 814 aa21.64■■□□□ 1.05
SNCA-209ENST00000506244 CHMP4AQ9BY43 222 aa21.64■■□□□ 1.05
SNCA-209ENST00000506244 MYL6BP14649 208 aa21.63■■□□□ 1.05
SNCA-209ENST00000506244 HDGFL1Q5TGJ6 251 aa21.63■■□□□ 1.05
SNCA-209ENST00000506244 WDR63Q8IWG1 891 aa21.63■■□□□ 1.05
SNCA-209ENST00000506244 NLGN2Q8NFZ4 835 aa21.63■■□□□ 1.05
SNCA-209ENST00000506244 NRXN2Q9P2S2 1712 aa21.63■■□□□ 1.05
SNCA-209ENST00000506244 SENP3-EIF4A1A0A087X0R7 540 aa21.61■■□□□ 1.05
SNCA-209ENST00000506244 KRT24Q2M2I5 525 aa21.61■■□□□ 1.05
SNCA-209ENST00000506244 DUSP27Q5VZP5 1158 aa21.61■■□□□ 1.05
SNCA-209ENST00000506244 TGFB2P61812 414 aa21.6■■□□□ 1.05
SNCA-209ENST00000506244 TBC1D9BQ66K14 1250 aa21.6■■□□□ 1.05
SNCA-209ENST00000506244 BICDL1Q6ZP65 573 aa21.6■■□□□ 1.05
SNCA-209ENST00000506244 SETDB2Q96T68 719 aa21.6■■□□□ 1.05
SNCA-209ENST00000506244 SALL2Q9Y467 1007 aaPredicted RBP21.6■■□□□ 1.05
SNCA-209ENST00000506244 AFDNP55196 1824 aaKnown RBP21.59■■□□□ 1.05
SNCA-209ENST00000506244 MAP3K15Q6ZN16 1313 aa21.59■■□□□ 1.05
SNCA-209ENST00000506244 ERVV-1B6SEH8 477 aa21.59■■□□□ 1.05
SNCA-209ENST00000506244 SERPINB2P05120 415 aa21.59■■□□□ 1.05
SNCA-209ENST00000506244 DDX21Q9NR30 783 aaKnown RBP eCLIP21.59■■□□□ 1.05
SNCA-209ENST00000506244 PXDNLA1KZ92 1463 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms