RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 GRIP2Q9C0E4 1043 aa7.72□□□□□ -1.17
CHD1-203ENST00000505657 NOVA2Q9UNW9 492 aaKnown RBP7.72□□□□□ -1.17
CHD1-203ENST00000505657 EPHA4P54764 986 aa7.71□□□□□ -1.18
CHD1-203ENST00000505657 PRICKLE2Q7Z3G6 844 aa7.71□□□□□ -1.18
CHD1-203ENST00000505657 TNS4Q8IZW8 715 aa7.71□□□□□ -1.18
CHD1-203ENST00000505657 TSEN2Q8NCE0 465 aaKnown RBP7.71□□□□□ -1.18
CHD1-203ENST00000505657 CNTNAP5Q8WYK1 1306 aa7.71□□□□□ -1.18
CHD1-203ENST00000505657 ATG7O95352 703 aa7.7□□□□□ -1.18
CHD1-203ENST00000505657 RHOQP17081 205 aa7.7□□□□□ -1.18
CHD1-203ENST00000505657 GPC1P35052 558 aa7.7□□□□□ -1.18
CHD1-203ENST00000505657 SMTNP53814 917 aa7.7□□□□□ -1.18
CHD1-203ENST00000505657 PLA2G4EQ3MJ16 856 aa7.7□□□□□ -1.18
CHD1-203ENST00000505657 SLC27A3Q5K4L6 730 aa7.7□□□□□ -1.18
CHD1-203ENST00000505657 SLC4A9Q96Q91 983 aa7.7□□□□□ -1.18
CHD1-203ENST00000505657 MSTNO14793 375 aa7.69□□□□□ -1.18
CHD1-203ENST00000505657 ADAM23O75077 832 aa7.69□□□□□ -1.18
CHD1-203ENST00000505657 ITGB2P05107 769 aa7.69□□□□□ -1.18
CHD1-203ENST00000505657 SEC13P55735 322 aa7.69□□□□□ -1.18
CHD1-203ENST00000505657 MTFR1Q15390 333 aa7.69□□□□□ -1.18
CHD1-203ENST00000505657 TBCELQ5QJ74 424 aa7.69□□□□□ -1.18
CHD1-203ENST00000505657 LYSMD3Q7Z3D4 306 aa7.69□□□□□ -1.18
CHD1-203ENST00000505657 ZNF295-AS1Q8N0V1 137 aa7.69□□□□□ -1.18
CHD1-203ENST00000505657 DCAF5Q96JK2 942 aa7.69□□□□□ -1.18
CHD1-203ENST00000505657 ZSCAN10Q96SZ4 725 aaPredicted RBP7.69□□□□□ -1.18
CHD1-203ENST00000505657 IQSEC3Q9UPP2 1182 aaPredicted RBP7.69□□□□□ -1.18
CHD1-203ENST00000505657 A6NJY4 79 aa7.68□□□□□ -1.18
CHD1-203ENST00000505657 POU4F2Q12837 409 aa7.68□□□□□ -1.18
CHD1-203ENST00000505657 ELOAQ14241 798 aaKnown RBP7.68□□□□□ -1.18
CHD1-203ENST00000505657 TMEM164Q5U3C3 297 aa7.68□□□□□ -1.18
CHD1-203ENST00000505657 GAS2L2Q8NHY3 880 aa7.68□□□□□ -1.18
CHD1-203ENST00000505657 SPOCK3Q9BQ16 436 aa7.68□□□□□ -1.18
CHD1-203ENST00000505657 ENAMQ9NRM1 1142 aa7.68□□□□□ -1.18
CHD1-203ENST00000505657 CARNS1A5YM72 827 aa7.67□□□□□ -1.18
CHD1-203ENST00000505657 BACH1O14867 736 aa7.67□□□□□ -1.18
CHD1-203ENST00000505657 TSPAN10Q9H1Z9 355 aaPredicted RBP7.67□□□□□ -1.18
CHD1-203ENST00000505657 SCHIP1Q9P0W5 487 aaPredicted RBP7.67□□□□□ -1.18
CHD1-203ENST00000505657 SPATA31C2B4DYI2 1134 aa7.66□□□□□ -1.18
CHD1-203ENST00000505657 M0R2N6 131 aa7.66□□□□□ -1.18
CHD1-203ENST00000505657 PPP1R15AO75807 674 aaPredicted RBP7.66□□□□□ -1.18
CHD1-203ENST00000505657 PHKA2P46019 1235 aa7.66□□□□□ -1.18
CHD1-203ENST00000505657 FAM69CQ0P6D2 419 aa7.66□□□□□ -1.18
CHD1-203ENST00000505657 C4orf17Q53FE4 359 aa7.66□□□□□ -1.18
CHD1-203ENST00000505657 NBPF10Q6P3W6 841 aaKnown RBP7.66□□□□□ -1.18
CHD1-203ENST00000505657 PPARGC1BQ86YN6 1023 aaKnown RBP7.66□□□□□ -1.18
CHD1-203ENST00000505657 SLC9A9Q8IVB4 645 aa7.66□□□□□ -1.18
CHD1-203ENST00000505657 NBPF15Q8N660 670 aa7.66□□□□□ -1.18
CHD1-203ENST00000505657 FAM200AQ8TCP9 573 aa7.66□□□□□ -1.18
CHD1-203ENST00000505657 SLAIN2Q9P270 581 aa7.66□□□□□ -1.18
CHD1-203ENST00000505657 RBM19Q9Y4C8 960 aaKnown RBP7.66□□□□□ -1.18
CHD1-203ENST00000505657 PHF20L1A8MW92 1017 aa7.65□□□□□ -1.18
CHD1-203ENST00000505657 GPR25O00155 361 aa7.65□□□□□ -1.18
CHD1-203ENST00000505657 C21orf2O43822 256 aa7.65□□□□□ -1.18
CHD1-203ENST00000505657 TMEM214Q6NUQ4 689 aaKnown RBP7.65□□□□□ -1.18
CHD1-203ENST00000505657 ZDHHC1Q8WTX9 485 aa7.65□□□□□ -1.18
CHD1-203ENST00000505657 IGF1RP08069 1367 aa7.64□□□□□ -1.19
CHD1-203ENST00000505657 CDK2AP1O14519 115 aa7.64□□□□□ -1.19
CHD1-203ENST00000505657 SH3PXD2AQ5TCZ1 1133 aa7.64□□□□□ -1.19
CHD1-203ENST00000505657 TAS1R3Q7RTX0 852 aa7.64□□□□□ -1.19
CHD1-203ENST00000505657 BEND7Q8N7W2 519 aaPredicted RBP7.64□□□□□ -1.19
CHD1-203ENST00000505657 RHBDD1Q8TEB9 315 aa7.64□□□□□ -1.19
CHD1-203ENST00000505657 MBIPQ9NS73 344 aa7.64□□□□□ -1.19
CHD1-203ENST00000505657 PARP3Q9Y6F1 533 aa7.64□□□□□ -1.19
CHD1-203ENST00000505657 TMEM88BA6NKF7 163 aa7.63□□□□□ -1.19
CHD1-203ENST00000505657 PLA2G4AP47712 749 aa7.63□□□□□ -1.19
CHD1-203ENST00000505657 GNASQ5JWF2 1037 aa7.63□□□□□ -1.19
CHD1-203ENST00000505657 NEDD1Q8NHV4 660 aa7.63□□□□□ -1.19
CHD1-203ENST00000505657 ZNF837Q96EG3 531 aaPredicted RBP7.63□□□□□ -1.19
CHD1-203ENST00000505657 HINFPQ9BQA5 517 aa7.63□□□□□ -1.19
CHD1-203ENST00000505657 ACIN1Q9UKV3 1341 aaKnown RBP7.62□□□□□ -1.19
CHD1-203ENST00000505657 PROCP04070 461 aa7.62□□□□□ -1.19
CHD1-203ENST00000505657 BCRP11274 1271 aa7.62□□□□□ -1.19
CHD1-203ENST00000505657 DBN1Q16643 649 aa7.62□□□□□ -1.19
CHD1-203ENST00000505657 TRIM22Q8IYM9 498 aa7.62□□□□□ -1.19
CHD1-203ENST00000505657 ACDQ96AP0 544 aa7.62□□□□□ -1.19
CHD1-203ENST00000505657 CABP1Q9NZU7 370 aa7.62□□□□□ -1.19
CHD1-203ENST00000505657 RIPOR1Q6ZS17 1223 aa7.61□□□□□ -1.19
CHD1-203ENST00000505657 RETREG2Q8NC44 543 aa7.61□□□□□ -1.19
CHD1-203ENST00000505657 SCG3Q8WXD2 468 aaKnown RBP7.61□□□□□ -1.19
CHD1-203ENST00000505657 PRIMPOLQ96LW4 560 aa7.61□□□□□ -1.19
CHD1-203ENST00000505657 NIFKQ9BYG3 293 aaKnown RBP7.61□□□□□ -1.19
CHD1-203ENST00000505657 TIMMDC1Q9NPL8 285 aa7.61□□□□□ -1.19
CHD1-203ENST00000505657 PRMT3O60678 531 aa7.6□□□□□ -1.19
CHD1-203ENST00000505657 GTF2E1P29083 439 aaPredicted RBP7.6□□□□□ -1.19
CHD1-203ENST00000505657 TXLNAP40222 546 aa7.6□□□□□ -1.19
CHD1-203ENST00000505657 OCLNQ16625 522 aa7.6□□□□□ -1.19
CHD1-203ENST00000505657 FOXR1Q6PIV2 292 aa7.6□□□□□ -1.19
CHD1-203ENST00000505657 PODNQ7Z5L7 613 aa7.6□□□□□ -1.19
CHD1-203ENST00000505657 GMCL1Q96IK5 515 aa7.6□□□□□ -1.19
CHD1-203ENST00000505657 ATAD2Q6PL18 1390 aa7.59□□□□□ -1.19
CHD1-203ENST00000505657 EML1O00423 815 aa7.59□□□□□ -1.19
CHD1-203ENST00000505657 PPP1R12BO60237 982 aaPredicted RBP7.59□□□□□ -1.19
CHD1-203ENST00000505657 WEE1P30291 646 aa7.59□□□□□ -1.19
CHD1-203ENST00000505657 TEAD4Q15561 434 aa7.59□□□□□ -1.19
CHD1-203ENST00000505657 SWI5Q1ZZU3 235 aa7.59□□□□□ -1.19
CHD1-203ENST00000505657 WDR44Q5JSH3 913 aa7.59□□□□□ -1.19
CHD1-203ENST00000505657 GALNT6Q8NCL4 622 aa7.59□□□□□ -1.19
CHD1-203ENST00000505657 GTPBP3Q969Y2 492 aaKnown RBP7.59□□□□□ -1.19
CHD1-203ENST00000505657 KLRG1Q96E93 195 aa7.59□□□□□ -1.19
CHD1-203ENST00000505657 THBS1P07996 1170 aa7.58□□□□□ -1.2
CHD1-203ENST00000505657 CSB-PGBD3P0DP91 1061 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms