RNA–Protein interactions for RNA: ENST00000505612.1

ITGA3-206, Transcript of integrin subunit alpha 3, humanhuman

TSL 4

Gene ITGA3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-206ENST00000505612 BABAM1Q9NWV8 329 aa17.3■□□□□ 0.36
ITGA3-206ENST00000505612 ATF5Q9Y2D1 282 aaPredicted RBP17.3■□□□□ 0.36
ITGA3-206ENST00000505612 ITGB4P16144 1822 aa17.29■□□□□ 0.36
ITGA3-206ENST00000505612 IFT57Q9NWB7 429 aa17.29■□□□□ 0.36
ITGA3-206ENST00000505612 FANCIQ9NVI1 1328 aa17.28■□□□□ 0.36
ITGA3-206ENST00000505612 DLG5Q8TDM6 1919 aa17.28■□□□□ 0.36
ITGA3-206ENST00000505612 ZNF853P0CG23 659 aa17.28■□□□□ 0.36
ITGA3-206ENST00000505612 GNAI1P63096 354 aa17.28■□□□□ 0.36
ITGA3-206ENST00000505612 DCTN1Q14203 1278 aa17.28■□□□□ 0.36
ITGA3-206ENST00000505612 NPM2Q86SE8 214 aaKnown RBP17.28■□□□□ 0.36
ITGA3-206ENST00000505612 PDGFDQ9GZP0 370 aaPredicted RBP17.28■□□□□ 0.36
ITGA3-206ENST00000505612 PAPPAQ13219 1627 aa17.28■□□□□ 0.36
ITGA3-206ENST00000505612 RFC4P35249 363 aa17.27■□□□□ 0.36
ITGA3-206ENST00000505612 CRKLP46109 303 aaKnown RBP17.27■□□□□ 0.36
ITGA3-206ENST00000505612 ZNF496Q96IT1 587 aaPredicted RBP17.27■□□□□ 0.36
ITGA3-206ENST00000505612 CCDC87Q9NVE4 849 aa17.27■□□□□ 0.36
ITGA3-206ENST00000505612 SNRPA1P09661 255 aaKnown RBP17.26■□□□□ 0.35
ITGA3-206ENST00000505612 CYP19A1P11511 503 aaPredicted RBP17.26■□□□□ 0.35
ITGA3-206ENST00000505612 RARSP54136 660 aaKnown RBP17.26■□□□□ 0.35
ITGA3-206ENST00000505612 PDE3AQ14432 1141 aa17.26■□□□□ 0.35
ITGA3-206ENST00000505612 DNAJC10Q8IXB1 793 aa17.26■□□□□ 0.35
ITGA3-206ENST00000505612 HEG1Q9ULI3 1381 aa17.26■□□□□ 0.35
ITGA3-206ENST00000505612 ADAMTS7Q9UKP4 1686 aa17.26■□□□□ 0.35
ITGA3-206ENST00000505612 SCN11AQ9UI33 1791 aa17.25■□□□□ 0.35
ITGA3-206ENST00000505612 PHF14O94880 888 aa17.25■□□□□ 0.35
ITGA3-206ENST00000505612 PTGER2P43116 358 aa17.25■□□□□ 0.35
ITGA3-206ENST00000505612 NLGN1Q8N2Q7 840 aa17.25■□□□□ 0.35
ITGA3-206ENST00000505612 CFAP44Q96MT7 982 aa17.25■□□□□ 0.35
ITGA3-206ENST00000505612 ARXQ96QS3 562 aa17.25■□□□□ 0.35
ITGA3-206ENST00000505612 ZNF831Q5JPB2 1677 aa17.23■□□□□ 0.35
ITGA3-206ENST00000505612 A0A087WZG4 1122 aa17.23■□□□□ 0.35
ITGA3-206ENST00000505612 DCAF8L1A6NGE4 600 aa17.23■□□□□ 0.35
ITGA3-206ENST00000505612 BRPF1P55201 1214 aaPredicted RBP17.23■□□□□ 0.35
ITGA3-206ENST00000505612 AAMPQ13685 434 aa17.23■□□□□ 0.35
ITGA3-206ENST00000505612 INTS5Q6P9B9 1019 aaKnown RBP17.23■□□□□ 0.35
ITGA3-206ENST00000505612 ARHGEF1Q92888 912 aaKnown RBP17.23■□□□□ 0.35
ITGA3-206ENST00000505612 LRP5O75197 1615 aa17.22■□□□□ 0.35
ITGA3-206ENST00000505612 ALDH1L2Q3SY69 923 aa17.22■□□□□ 0.35
ITGA3-206ENST00000505612 SGIP1Q9BQI5 828 aa17.22■□□□□ 0.35
ITGA3-206ENST00000505612 C4BP0C0L5 1744 aa17.21■□□□□ 0.35
ITGA3-206ENST00000505612 ZPR1O75312 459 aa17.21■□□□□ 0.35
ITGA3-206ENST00000505612 MS4A1P11836 297 aa17.21■□□□□ 0.35
ITGA3-206ENST00000505612 EXOSC9Q06265 439 aaKnown RBP17.21■□□□□ 0.35
ITGA3-206ENST00000505612 TSPYL4Q9UJ04 414 aa17.21■□□□□ 0.35
ITGA3-206ENST00000505612 C5P01031 1676 aa17.2■□□□□ 0.34
ITGA3-206ENST00000505612 KCNQ3O43525 872 aa17.2■□□□□ 0.34
ITGA3-206ENST00000505612 BCAR3O75815 825 aa17.2■□□□□ 0.34
ITGA3-206ENST00000505612 EXOC6Q8TAG9 804 aa17.2■□□□□ 0.34
ITGA3-206ENST00000505612 CHL1O00533 1208 aa17.19■□□□□ 0.34
ITGA3-206ENST00000505612 PLIN1O60240 522 aa17.19■□□□□ 0.34
ITGA3-206ENST00000505612 IL6STP40189 918 aaPredicted RBP17.19■□□□□ 0.34
ITGA3-206ENST00000505612 TSR2Q969E8 191 aaKnown RBP17.19■□□□□ 0.34
ITGA3-206ENST00000505612 THUMPD2Q9BTF0 503 aaKnown RBP17.19■□□□□ 0.34
ITGA3-206ENST00000505612 CHMP4AQ9BY43 222 aa17.19■□□□□ 0.34
ITGA3-206ENST00000505612 MIS18AQ9NYP9 233 aa17.19■□□□□ 0.34
ITGA3-206ENST00000505612 KCPQ6ZWJ8 1503 aa17.19■□□□□ 0.34
ITGA3-206ENST00000505612 SOS1Q07889 1333 aaPredicted RBP17.19■□□□□ 0.34
ITGA3-206ENST00000505612 CANXP27824 592 aaKnown RBP17.18■□□□□ 0.34
ITGA3-206ENST00000505612 EIF4A1P60842 406 aaKnown RBP17.18■□□□□ 0.34
ITGA3-206ENST00000505612 CCDC136Q96JN2 1154 aa17.18■□□□□ 0.34
ITGA3-206ENST00000505612 CASZ1Q86V15 1759 aa17.17■□□□□ 0.34
ITGA3-206ENST00000505612 GIGYF1O75420 1035 aaPredicted RBP17.17■□□□□ 0.34
ITGA3-206ENST00000505612 EIF5P55010 431 aaKnown RBP17.17■□□□□ 0.34
ITGA3-206ENST00000505612 AMIGO3Q86WK7 504 aa17.17■□□□□ 0.34
ITGA3-206ENST00000505612 MBIPQ9NS73 344 aa17.17■□□□□ 0.34
ITGA3-206ENST00000505612 ZBTB1Q9Y2K1 713 aa17.17■□□□□ 0.34
ITGA3-206ENST00000505612 QSER1Q2KHR3 1735 aa17.16■□□□□ 0.34
ITGA3-206ENST00000505612 CRBNQ96SW2 442 aa17.16■□□□□ 0.34
ITGA3-206ENST00000505612 NARFQ9UHQ1 456 aa17.16■□□□□ 0.34
ITGA3-206ENST00000505612 CD2APQ9Y5K6 639 aa17.16■□□□□ 0.34
ITGA3-206ENST00000505612 USP16Q9Y5T5 823 aa17.16■□□□□ 0.34
ITGA3-206ENST00000505612 GYS1P13807 737 aa17.15■□□□□ 0.34
ITGA3-206ENST00000505612 MSL1Q68DK7 614 aa17.15■□□□□ 0.34
ITGA3-206ENST00000505612 SYT17Q9BSW7 474 aa17.15■□□□□ 0.34
ITGA3-206ENST00000505612 LAS1LQ9Y4W2 734 aaKnown RBP17.15■□□□□ 0.34
ITGA3-206ENST00000505612 USP42Q9H9J4 1324 aaKnown RBP17.15■□□□□ 0.34
ITGA3-206ENST00000505612 RGL2O15211 777 aa17.14■□□□□ 0.33
ITGA3-206ENST00000505612 VAMP4O75379 141 aa17.14■□□□□ 0.33
ITGA3-206ENST00000505612 A1BGP04217 495 aa17.14■□□□□ 0.33
ITGA3-206ENST00000505612 C20orf194Q5TEA3 1177 aa17.14■□□□□ 0.33
ITGA3-206ENST00000505612 B4GALNT3Q6L9W6 998 aa17.14■□□□□ 0.33
ITGA3-206ENST00000505612 SMIM5Q71RC9 77 aa17.14■□□□□ 0.33
ITGA3-206ENST00000505612 FHDC1Q9C0D6 1143 aaPredicted RBP17.14■□□□□ 0.33
ITGA3-206ENST00000505612 PARP3Q9Y6F1 533 aa17.14■□□□□ 0.33
ITGA3-206ENST00000505612 ERBB4Q15303 1308 aa17.14■□□□□ 0.33
ITGA3-206ENST00000505612 KIF16BQ96L93 1317 aa17.14■□□□□ 0.33
ITGA3-206ENST00000505612 TAF1LQ8IZX4 1826 aa17.14■□□□□ 0.33
ITGA3-206ENST00000505612 IPO8O15397 1037 aaKnown RBP17.13■□□□□ 0.33
ITGA3-206ENST00000505612 MMP10P09238 476 aa17.13■□□□□ 0.33
ITGA3-206ENST00000505612 ZKSCAN2Q63HK3 967 aa17.13■□□□□ 0.33
ITGA3-206ENST00000505612 ARHGAP45Q92619 1136 aa17.13■□□□□ 0.33
ITGA3-206ENST00000505612 CICQ96RK0 1608 aaPredicted RBP17.13■□□□□ 0.33
ITGA3-206ENST00000505612 COL15A1P39059 1388 aa17.13■□□□□ 0.33
ITGA3-206ENST00000505612 HOXB7P09629 217 aa17.12■□□□□ 0.33
ITGA3-206ENST00000505612 SSH1Q8WYL5 1049 aa17.12■□□□□ 0.33
ITGA3-206ENST00000505612 USPL1Q5W0Q7 1092 aa17.11■□□□□ 0.33
ITGA3-206ENST00000505612 SMC4Q9NTJ3 1288 aa17.11■□□□□ 0.33
ITGA3-206ENST00000505612 ZNF652Q9Y2D9 606 aa17.11■□□□□ 0.33
ITGA3-206ENST00000505612 ZNF330Q9Y3S2 320 aaPredicted RBP17.11■□□□□ 0.33
ITGA3-206ENST00000505612 TWISTNBQ3B726 338 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms