RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 BRPF1P55201 1214 aaPredicted RBP15.93■□□□□ 0.14
LETM1-203ENST00000505551 CUL4AQ13619 759 aa15.93■□□□□ 0.14
LETM1-203ENST00000505551 THUMPD2Q9BTF0 503 aaKnown RBP15.93■□□□□ 0.14
LETM1-203ENST00000505551 TRIM35Q9UPQ4 493 aa15.93■□□□□ 0.14
LETM1-203ENST00000505551 PRKAR2BP31323 418 aa15.92■□□□□ 0.14
LETM1-203ENST00000505551 TMX3Q96JJ7 454 aa15.92■□□□□ 0.14
LETM1-203ENST00000505551 NRXN3Q9Y4C0 1643 aa15.92■□□□□ 0.14
LETM1-203ENST00000505551 TMEM87AQ8NBN3 555 aa15.92■□□□□ 0.14
LETM1-203ENST00000505551 COG3Q96JB2 828 aa15.92■□□□□ 0.14
LETM1-203ENST00000505551 PHACTR3Q96KR7 559 aa15.92■□□□□ 0.14
LETM1-203ENST00000505551 AP5Z1O43299 807 aa15.91■□□□□ 0.14
LETM1-203ENST00000505551 USP48Q86UV5 1035 aa15.91■□□□□ 0.14
LETM1-203ENST00000505551 C1orf115Q9H7X2 142 aa15.91■□□□□ 0.14
LETM1-203ENST00000505551 TCHHQ07283 1943 aa15.9■□□□□ 0.14
LETM1-203ENST00000505551 PTCH1Q13635 1447 aa15.9■□□□□ 0.14
LETM1-203ENST00000505551 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.9■□□□□ 0.14
LETM1-203ENST00000505551 TRIM6-TRIM34B2RNG4 842 aa15.9■□□□□ 0.14
LETM1-203ENST00000505551 MX1P20591 662 aa15.9■□□□□ 0.14
LETM1-203ENST00000505551 TRERF1Q96PN7 1200 aa15.9■□□□□ 0.14
LETM1-203ENST00000505551 TRIM34Q9BYJ4 488 aa15.9■□□□□ 0.14
LETM1-203ENST00000505551 ADAMTS13Q76LX8 1427 aa15.9■□□□□ 0.14
LETM1-203ENST00000505551 GOLGA6L6A8MZA4 724 aa15.9■□□□□ 0.14
LETM1-203ENST00000505551 SMARCA5O60264 1052 aaPredicted RBP15.9■□□□□ 0.14
LETM1-203ENST00000505551 FUCA2Q9BTY2 467 aa15.9■□□□□ 0.14
LETM1-203ENST00000505551 ACEP12821 1306 aa15.9■□□□□ 0.14
LETM1-203ENST00000505551 MCM2P49736 904 aa15.89■□□□□ 0.13
LETM1-203ENST00000505551 INTS4Q96HW7 963 aaKnown RBP15.89■□□□□ 0.13
LETM1-203ENST00000505551 NUTM2GQ5VZR2 741 aa15.89■□□□□ 0.13
LETM1-203ENST00000505551 ZNF397Q8NF99 534 aaPredicted RBP15.88■□□□□ 0.13
LETM1-203ENST00000505551 GDPD2Q9HCC8 539 aa15.88■□□□□ 0.13
LETM1-203ENST00000505551 REC8O95072 547 aa15.88■□□□□ 0.13
LETM1-203ENST00000505551 NAA30Q147X3 362 aaPredicted RBP15.88■□□□□ 0.13
LETM1-203ENST00000505551 THEMISQ8N1K5 641 aaPredicted RBP15.88■□□□□ 0.13
LETM1-203ENST00000505551 PRR29P0C7W0 189 aa15.88■□□□□ 0.13
LETM1-203ENST00000505551 PAXBP1Q9Y5B6 917 aa15.88■□□□□ 0.13
LETM1-203ENST00000505551 AXDND1Q5T1B0 1012 aaPredicted RBP15.87■□□□□ 0.13
LETM1-203ENST00000505551 PTPRUQ92729 1446 aa15.87■□□□□ 0.13
LETM1-203ENST00000505551 SETD1AO15047 1707 aaKnown RBP15.87■□□□□ 0.13
LETM1-203ENST00000505551 KNDC1Q76NI1 1749 aa15.87■□□□□ 0.13
LETM1-203ENST00000505551 ERICH4A6NGS2 130 aa15.87■□□□□ 0.13
LETM1-203ENST00000505551 ELL2O00472 640 aaPredicted RBP15.87■□□□□ 0.13
LETM1-203ENST00000505551 CASC1Q6TDU7 716 aa15.87■□□□□ 0.13
LETM1-203ENST00000505551 ZNF428Q96B54 188 aa15.87■□□□□ 0.13
LETM1-203ENST00000505551 FEZ2Q9UHY8 353 aaPredicted RBP15.87■□□□□ 0.13
LETM1-203ENST00000505551 RPAP1Q9BWH6 1393 aaPredicted RBP15.86■□□□□ 0.13
LETM1-203ENST00000505551 ARHGAP45Q92619 1136 aa15.86■□□□□ 0.13
LETM1-203ENST00000505551 SDSP20132 328 aa15.86■□□□□ 0.13
LETM1-203ENST00000505551 KMT5BQ4FZB7 885 aa15.86■□□□□ 0.13
LETM1-203ENST00000505551 CCDC112Q8NEF3 446 aa15.86■□□□□ 0.13
LETM1-203ENST00000505551 CPS1P31327 1500 aa15.85■□□□□ 0.13
LETM1-203ENST00000505551 DLC1Q96QB1 1528 aa15.85■□□□□ 0.13
LETM1-203ENST00000505551 UBR1Q8IWV7 1749 aa15.85■□□□□ 0.13
LETM1-203ENST00000505551 KCNA6P17658 529 aa15.85■□□□□ 0.13
LETM1-203ENST00000505551 CYP2C19P33261 490 aa15.85■□□□□ 0.13
LETM1-203ENST00000505551 NEK4P51957 841 aa15.85■□□□□ 0.13
LETM1-203ENST00000505551 SPC24Q8NBT2 197 aa15.85■□□□□ 0.13
LETM1-203ENST00000505551 NGDNQ8NEJ9 315 aaKnown RBP15.85■□□□□ 0.13
LETM1-203ENST00000505551 CPSF1Q10570 1443 aaKnown RBP15.85■□□□□ 0.13
LETM1-203ENST00000505551 PLEKHG1Q9ULL1 1385 aa15.84■□□□□ 0.13
LETM1-203ENST00000505551 ABCC4O15439 1325 aa15.84■□□□□ 0.13
LETM1-203ENST00000505551 WDR33Q9C0J8 1336 aaKnown RBP15.84■□□□□ 0.13
LETM1-203ENST00000505551 PTGS1P23219 599 aa15.84■□□□□ 0.13
LETM1-203ENST00000505551 DCTN1Q14203 1278 aa15.84■□□□□ 0.13
LETM1-203ENST00000505551 C16orf45Q96MC5 204 aaPredicted RBP15.84■□□□□ 0.13
LETM1-203ENST00000505551 DCTPP1Q9H773 170 aa15.84■□□□□ 0.13
LETM1-203ENST00000505551 FAM83GA6ND36 823 aa15.84■□□□□ 0.13
LETM1-203ENST00000505551 TNNT1P13805 278 aa15.84■□□□□ 0.13
LETM1-203ENST00000505551 RTL1A6NKG5 1358 aa15.84■□□□□ 0.13
LETM1-203ENST00000505551 COL3A1P02461 1466 aaPredicted RBP15.83■□□□□ 0.13
LETM1-203ENST00000505551 ERC2O15083 957 aa15.83■□□□□ 0.13
LETM1-203ENST00000505551 FCHSD2O94868 740 aa15.83■□□□□ 0.13
LETM1-203ENST00000505551 IL13P35225 146 aa15.83■□□□□ 0.13
LETM1-203ENST00000505551 KIF1BPQ96EK5 621 aa15.83■□□□□ 0.13
LETM1-203ENST00000505551 TTC21BQ7Z4L5 1316 aa15.83■□□□□ 0.12
LETM1-203ENST00000505551 RBM6P78332 1123 aaKnown RBP15.83■□□□□ 0.12
LETM1-203ENST00000505551 SLFNL1Q499Z3 407 aa15.83■□□□□ 0.12
LETM1-203ENST00000505551 EDC4Q6P2E9 1401 aaKnown RBP15.83■□□□□ 0.12
LETM1-203ENST00000505551 FAM135BQ49AJ0 1406 aa15.82■□□□□ 0.12
LETM1-203ENST00000505551 UBE2HP62256 183 aa15.82■□□□□ 0.12
LETM1-203ENST00000505551 SIRT1Q96EB6 747 aa15.82■□□□□ 0.12
LETM1-203ENST00000505551 PNPLA6Q8IY17 1366 aa15.82■□□□□ 0.12
LETM1-203ENST00000505551 ATP7BP35670 1465 aa15.82■□□□□ 0.12
LETM1-203ENST00000505551 HNRNPH2P55795 449 aaKnown RBP15.82■□□□□ 0.12
LETM1-203ENST00000505551 HSP90AB2PQ58FF8 381 aa15.82■□□□□ 0.12
LETM1-203ENST00000505551 MRPL50Q8N5N7 158 aaKnown RBP15.82■□□□□ 0.12
LETM1-203ENST00000505551 CARD10Q9BWT7 1032 aa15.82■□□□□ 0.12
LETM1-203ENST00000505551 EFCC1Q9HA90 598 aa15.82■□□□□ 0.12
LETM1-203ENST00000505551 SH3BP1Q9Y3L3 701 aa15.82■□□□□ 0.12
LETM1-203ENST00000505551 C16orf71Q8IYS4 520 aaPredicted RBP15.81■□□□□ 0.12
LETM1-203ENST00000505551 YY1AP1Q9H869 796 aa15.81■□□□□ 0.12
LETM1-203ENST00000505551 ANAPC15P60006 121 aa15.81■□□□□ 0.12
LETM1-203ENST00000505551 FOXD4L6Q3SYB3 417 aaPredicted RBP15.81■□□□□ 0.12
LETM1-203ENST00000505551 FOXD4L3Q6VB84 417 aaPredicted RBP15.81■□□□□ 0.12
LETM1-203ENST00000505551 IRF6O14896 467 aa15.81■□□□□ 0.12
LETM1-203ENST00000505551 EP400NLQ6ZTU2 488 aa15.81■□□□□ 0.12
LETM1-203ENST00000505551 EGFL6Q8IUX8 553 aa15.81■□□□□ 0.12
LETM1-203ENST00000505551 SRCIN1Q9C0H9 1055 aa15.81■□□□□ 0.12
LETM1-203ENST00000505551 TBX22Q9Y458 520 aa15.81■□□□□ 0.12
LETM1-203ENST00000505551 RAD51AP2Q09MP3 1159 aa15.8■□□□□ 0.12
LETM1-203ENST00000505551 SULT6B1Q6IMI4 303 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms