RNA–Protein interactions for RNA: ENST00000505469.1

PPARGC1A-203, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 2

Gene PPARGC1A, Length 406 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-203ENST00000505469 RTCBQ9Y3I0 505 aaKnown RBP11.55□□□□□ -0.56
PPARGC1A-203ENST00000505469 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.54□□□□□ -0.56
PPARGC1A-203ENST00000505469 KCNQ4P56696 695 aa11.54□□□□□ -0.56
PPARGC1A-203ENST00000505469 SLC4A9Q96Q91 983 aa11.54□□□□□ -0.56
PPARGC1A-203ENST00000505469 SYT17Q9BSW7 474 aa11.54□□□□□ -0.56
PPARGC1A-203ENST00000505469 LGR6Q9HBX8 967 aa11.54□□□□□ -0.56
PPARGC1A-203ENST00000505469 GNPATO15228 680 aa11.53□□□□□ -0.56
PPARGC1A-203ENST00000505469 TTC5Q8N0Z6 440 aa11.53□□□□□ -0.56
PPARGC1A-203ENST00000505469 NLGN1Q8N2Q7 840 aa11.53□□□□□ -0.56
PPARGC1A-203ENST00000505469 PIP4P2Q8N4L2 257 aa11.53□□□□□ -0.56
PPARGC1A-203ENST00000505469 FHDC1Q9C0D6 1143 aaPredicted RBP11.53□□□□□ -0.56
PPARGC1A-203ENST00000505469 CLEC11AQ9Y240 323 aa11.53□□□□□ -0.56
PPARGC1A-203ENST00000505469 CD2APQ9Y5K6 639 aa11.53□□□□□ -0.56
PPARGC1A-203ENST00000505469 NUP98P52948 1817 aa11.53□□□□□ -0.56
PPARGC1A-203ENST00000505469 DDX10Q13206 875 aaKnown RBP11.52□□□□□ -0.57
PPARGC1A-203ENST00000505469 TRAPPC3LQ5T215 181 aa11.52□□□□□ -0.57
PPARGC1A-203ENST00000505469 ZNF790Q6PG37 636 aa11.52□□□□□ -0.57
PPARGC1A-203ENST00000505469 IL17REQ8NFR9 667 aa11.52□□□□□ -0.57
PPARGC1A-203ENST00000505469 RTF1Q92541 710 aaKnown RBP11.52□□□□□ -0.57
PPARGC1A-203ENST00000505469 PHACTR3Q96KR7 559 aa11.52□□□□□ -0.57
PPARGC1A-203ENST00000505469 HEG1Q9ULI3 1381 aa11.52□□□□□ -0.57
PPARGC1A-203ENST00000505469 N4BP2Q86UW6 1770 aaPredicted RBP11.51□□□□□ -0.57
PPARGC1A-203ENST00000505469 RGL2O15211 777 aa11.51□□□□□ -0.57
PPARGC1A-203ENST00000505469 STARD3NLO95772 234 aa11.51□□□□□ -0.57
PPARGC1A-203ENST00000505469 CRKLP46109 303 aaKnown RBP11.51□□□□□ -0.57
PPARGC1A-203ENST00000505469 PLEKHF1Q96S99 279 aa11.51□□□□□ -0.57
PPARGC1A-203ENST00000505469 ARFGEF2Q9Y6D5 1785 aa11.51□□□□□ -0.57
PPARGC1A-203ENST00000505469 PTCD1O75127 700 aaKnown RBP11.5□□□□□ -0.57
PPARGC1A-203ENST00000505469 SPDYE1Q8NFV5 336 aaPredicted RBP11.5□□□□□ -0.57
PPARGC1A-203ENST00000505469 PNISRQ8TF01 805 aaKnown RBP11.5□□□□□ -0.57
PPARGC1A-203ENST00000505469 FMNL2Q96PY5 1086 aa11.5□□□□□ -0.57
PPARGC1A-203ENST00000505469 PRKRIP1Q9H875 184 aaPredicted RBP11.5□□□□□ -0.57
PPARGC1A-203ENST00000505469 CCDC87Q9NVE4 849 aa11.5□□□□□ -0.57
PPARGC1A-203ENST00000505469 BABAM1Q9NWV8 329 aa11.5□□□□□ -0.57
PPARGC1A-203ENST00000505469 MAPK8IP3Q9UPT6 1336 aa11.5□□□□□ -0.57
PPARGC1A-203ENST00000505469 CYP19A1P11511 503 aaPredicted RBP11.49□□□□□ -0.57
PPARGC1A-203ENST00000505469 RFC4P35249 363 aa11.49□□□□□ -0.57
PPARGC1A-203ENST00000505469 LMOD3Q0VAK6 560 aa11.49□□□□□ -0.57
PPARGC1A-203ENST00000505469 SOS1Q07889 1333 aaPredicted RBP11.49□□□□□ -0.57
PPARGC1A-203ENST00000505469 USP42Q9H9J4 1324 aaKnown RBP11.49□□□□□ -0.57
PPARGC1A-203ENST00000505469 ANKRD36CQ5JPF3 1778 aa11.49□□□□□ -0.57
PPARGC1A-203ENST00000505469 CNGB1Q14028 1251 aaPredicted RBP11.48□□□□□ -0.57
PPARGC1A-203ENST00000505469 NFE2L2Q16236 605 aa11.48□□□□□ -0.57
PPARGC1A-203ENST00000505469 AMIGO3Q86WK7 504 aa11.48□□□□□ -0.57
PPARGC1A-203ENST00000505469 ARHGEF1Q92888 912 aaKnown RBP11.48□□□□□ -0.57
PPARGC1A-203ENST00000505469 COL15A1P39059 1388 aa11.48□□□□□ -0.57
PPARGC1A-203ENST00000505469 C10orf71Q711Q0 1435 aa11.48□□□□□ -0.57
PPARGC1A-203ENST00000505469 SBF1O95248 1867 aa11.48□□□□□ -0.57
PPARGC1A-203ENST00000505469 ANKRD31Q8N7Z5 1873 aa11.47□□□□□ -0.57
PPARGC1A-203ENST00000505469 A0A087WZG4 1122 aa11.47□□□□□ -0.57
PPARGC1A-203ENST00000505469 BTBD11A6QL63 1104 aa11.47□□□□□ -0.57
PPARGC1A-203ENST00000505469 PHF14O94880 888 aa11.47□□□□□ -0.57
PPARGC1A-203ENST00000505469 GYS1P13807 737 aa11.47□□□□□ -0.57
PPARGC1A-203ENST00000505469 FXR2P51116 673 aaKnown RBP eCLIP11.47□□□□□ -0.57
PPARGC1A-203ENST00000505469 TAF7Q15545 349 aaPredicted RBP11.47□□□□□ -0.57
PPARGC1A-203ENST00000505469 INTS5Q6P9B9 1019 aaKnown RBP11.47□□□□□ -0.57
PPARGC1A-203ENST00000505469 ZNF496Q96IT1 587 aaPredicted RBP11.47□□□□□ -0.57
PPARGC1A-203ENST00000505469 DICER1Q9UPY3 1922 aaKnown RBP11.47□□□□□ -0.57
PPARGC1A-203ENST00000505469 IL6STP40189 918 aaPredicted RBP11.46□□□□□ -0.57
PPARGC1A-203ENST00000505469 SLC39A6Q13433 755 aa11.46□□□□□ -0.57
PPARGC1A-203ENST00000505469 DNAJC10Q8IXB1 793 aa11.46□□□□□ -0.57
PPARGC1A-203ENST00000505469 NARFQ9UHQ1 456 aa11.46□□□□□ -0.57
PPARGC1A-203ENST00000505469 CCDC88AQ3V6T2 1871 aa11.46□□□□□ -0.58
PPARGC1A-203ENST00000505469 GRIN3BO60391 1043 aa11.45□□□□□ -0.58
PPARGC1A-203ENST00000505469 SNRPA1P09661 255 aaKnown RBP11.45□□□□□ -0.58
PPARGC1A-203ENST00000505469 EIF5P55010 431 aaKnown RBP11.45□□□□□ -0.58
PPARGC1A-203ENST00000505469 TGFB2P61812 414 aa11.45□□□□□ -0.58
PPARGC1A-203ENST00000505469 ERBB4Q15303 1308 aa11.44□□□□□ -0.58
PPARGC1A-203ENST00000505469 ZNF316A6NFI3 1004 aaPredicted RBP11.44□□□□□ -0.58
PPARGC1A-203ENST00000505469 ZPR1O75312 459 aa11.44□□□□□ -0.58
PPARGC1A-203ENST00000505469 MMP10P09238 476 aa11.44□□□□□ -0.58
PPARGC1A-203ENST00000505469 WDR43Q15061 677 aaKnown RBP eCLIP11.44□□□□□ -0.58
PPARGC1A-203ENST00000505469 RUNDC1Q96C34 613 aa11.44□□□□□ -0.58
PPARGC1A-203ENST00000505469 CACNA1SQ13698 1873 aa11.43□□□□□ -0.58
PPARGC1A-203ENST00000505469 PDZRN3Q9UPQ7 1066 aa11.43□□□□□ -0.58
PPARGC1A-203ENST00000505469 ZBTB1Q9Y2K1 713 aa11.43□□□□□ -0.58
PPARGC1A-203ENST00000505469 PARP3Q9Y6F1 533 aa11.43□□□□□ -0.58
PPARGC1A-203ENST00000505469 PXDNLA1KZ92 1463 aa11.43□□□□□ -0.58
PPARGC1A-203ENST00000505469 TMPOP42166 694 aaKnown RBP11.42□□□□□ -0.58
PPARGC1A-203ENST00000505469 MSL1Q68DK7 614 aa11.42□□□□□ -0.58
PPARGC1A-203ENST00000505469 CLEC4GQ6UXB4 293 aa11.42□□□□□ -0.58
PPARGC1A-203ENST00000505469 MCM10Q7L590 875 aa11.42□□□□□ -0.58
PPARGC1A-203ENST00000505469 NPM2Q86SE8 214 aaKnown RBP11.42□□□□□ -0.58
PPARGC1A-203ENST00000505469 FER1L6Q2WGJ9 1857 aa11.42□□□□□ -0.58
PPARGC1A-203ENST00000505469 SPDYE4A6NLX3 237 aa11.41□□□□□ -0.58
PPARGC1A-203ENST00000505469 TM4SF1P30408 202 aa11.41□□□□□ -0.58
PPARGC1A-203ENST00000505469 RIPK4P57078 832 aa11.4□□□□□ -0.58
PPARGC1A-203ENST00000505469 CALD1Q05682 793 aaKnown RBP11.4□□□□□ -0.58
PPARGC1A-203ENST00000505469 COL11A2P13942 1736 aaPredicted RBP11.4□□□□□ -0.58
PPARGC1A-203ENST00000505469 CARMIL3Q8ND23 1372 aa11.4□□□□□ -0.59
PPARGC1A-203ENST00000505469 POLRMTO00411 1230 aaKnown RBP11.39□□□□□ -0.59
PPARGC1A-203ENST00000505469 HOXB7P09629 217 aa11.39□□□□□ -0.59
PPARGC1A-203ENST00000505469 GPR162Q16538 588 aa11.39□□□□□ -0.59
PPARGC1A-203ENST00000505469 NLGN2Q8NFZ4 835 aa11.39□□□□□ -0.59
PPARGC1A-203ENST00000505469 ZNF652Q9Y2D9 606 aa11.39□□□□□ -0.59
PPARGC1A-203ENST00000505469 GIGYF1O75420 1035 aaPredicted RBP11.38□□□□□ -0.59
PPARGC1A-203ENST00000505469 EIF4A1P60842 406 aaKnown RBP11.38□□□□□ -0.59
PPARGC1A-203ENST00000505469 DCTN1Q14203 1278 aa11.38□□□□□ -0.59
PPARGC1A-203ENST00000505469 FKBP8Q14318 412 aa11.38□□□□□ -0.59
PPARGC1A-203ENST00000505469 USPL1Q5W0Q7 1092 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms