RNA–Protein interactions for RNA: ENST00000505417.1

SNRPCP13-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 13, humanhuman

BASIC

Gene SNRPCP13, Length 190 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP13-201ENST00000505417 CICQ96RK0 1608 aaPredicted RBP13.33□□□□□ -0.28
SNRPCP13-201ENST00000505417 HOXB7P09629 217 aa13.33□□□□□ -0.28
SNRPCP13-201ENST00000505417 ZNF827Q17R98 1081 aa13.33□□□□□ -0.28
SNRPCP13-201ENST00000505417 MBIPQ9NS73 344 aa13.33□□□□□ -0.28
SNRPCP13-201ENST00000505417 RPS6KA4O75676 772 aa13.32□□□□□ -0.28
SNRPCP13-201ENST00000505417 ADRA2BP18089 450 aa13.32□□□□□ -0.28
SNRPCP13-201ENST00000505417 SSFA2P28290 1259 aa13.32□□□□□ -0.28
SNRPCP13-201ENST00000505417 INTS5Q6P9B9 1019 aaKnown RBP13.32□□□□□ -0.28
SNRPCP13-201ENST00000505417 CHMP4AQ9BY43 222 aa13.32□□□□□ -0.28
SNRPCP13-201ENST00000505417 UBR2Q8IWV8 1755 aa13.31□□□□□ -0.28
SNRPCP13-201ENST00000505417 CRKLP46109 303 aaKnown RBP13.31□□□□□ -0.28
SNRPCP13-201ENST00000505417 TFCP2L1Q9NZI6 479 aa13.31□□□□□ -0.28
SNRPCP13-201ENST00000505417 USP16Q9Y5T5 823 aa13.31□□□□□ -0.28
SNRPCP13-201ENST00000505417 GOLGA2Q08379 1002 aa13.3□□□□□ -0.28
SNRPCP13-201ENST00000505417 SLC16A10Q8TF71 515 aa13.3□□□□□ -0.28
SNRPCP13-201ENST00000505417 AK7Q96M32 723 aa13.3□□□□□ -0.28
SNRPCP13-201ENST00000505417 MTFR1LQ9H019 292 aa13.3□□□□□ -0.28
SNRPCP13-201ENST00000505417 MYH16Q9H6N6 1097 aa13.3□□□□□ -0.28
SNRPCP13-201ENST00000505417 CCDC87Q9NVE4 849 aa13.3□□□□□ -0.28
SNRPCP13-201ENST00000505417 RTCBQ9Y3I0 505 aaKnown RBP13.3□□□□□ -0.28
SNRPCP13-201ENST00000505417 SALL2Q9Y467 1007 aaPredicted RBP13.3□□□□□ -0.28
SNRPCP13-201ENST00000505417 LAS1LQ9Y4W2 734 aaKnown RBP13.3□□□□□ -0.28
SNRPCP13-201ENST00000505417 ERBB4Q15303 1308 aa13.3□□□□□ -0.28
SNRPCP13-201ENST00000505417 C5P01031 1676 aa13.3□□□□□ -0.28
SNRPCP13-201ENST00000505417 E9PSI1 815 aa13.29□□□□□ -0.28
SNRPCP13-201ENST00000505417 IL6STP40189 918 aaPredicted RBP13.29□□□□□ -0.28
SNRPCP13-201ENST00000505417 TRMT2AQ8IZ69 625 aaKnown RBP13.29□□□□□ -0.28
SNRPCP13-201ENST00000505417 ARXQ96QS3 562 aa13.29□□□□□ -0.28
SNRPCP13-201ENST00000505417 KDM3BQ7LBC6 1761 aa13.28□□□□□ -0.28
SNRPCP13-201ENST00000505417 VIRMAQ69YN4 1812 aaKnown RBP13.28□□□□□ -0.28
SNRPCP13-201ENST00000505417 PRAMEF22A3QJZ6 481 aa13.28□□□□□ -0.28
SNRPCP13-201ENST00000505417 GNPATO15228 680 aa13.28□□□□□ -0.28
SNRPCP13-201ENST00000505417 EIF5P55010 431 aaKnown RBP13.28□□□□□ -0.28
SNRPCP13-201ENST00000505417 SLFN5Q08AF3 891 aa13.28□□□□□ -0.28
SNRPCP13-201ENST00000505417 GPR162Q16538 588 aa13.28□□□□□ -0.28
SNRPCP13-201ENST00000505417 TRAPPC3LQ5T215 181 aa13.28□□□□□ -0.28
SNRPCP13-201ENST00000505417 SPINK5Q9NQ38 1064 aaPredicted RBP13.28□□□□□ -0.28
SNRPCP13-201ENST00000505417 PNPLA7Q6ZV29 1317 aa13.28□□□□□ -0.28
SNRPCP13-201ENST00000505417 C4BP0C0L5 1744 aa13.27□□□□□ -0.28
SNRPCP13-201ENST00000505417 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.27□□□□□ -0.29
SNRPCP13-201ENST00000505417 RGL2O15211 777 aa13.27□□□□□ -0.29
SNRPCP13-201ENST00000505417 DUSP27Q5VZP5 1158 aa13.27□□□□□ -0.29
SNRPCP13-201ENST00000505417 COL23A1Q86Y22 540 aaPredicted RBP13.27□□□□□ -0.29
SNRPCP13-201ENST00000505417 ZBTB1Q9Y2K1 713 aa13.27□□□□□ -0.29
SNRPCP13-201ENST00000505417 FANCIQ9NVI1 1328 aa13.27□□□□□ -0.29
SNRPCP13-201ENST00000505417 A0A087WZG4 1122 aa13.26□□□□□ -0.29
SNRPCP13-201ENST00000505417 A1BGP04217 495 aa13.26□□□□□ -0.29
SNRPCP13-201ENST00000505417 AMIGO3Q86WK7 504 aa13.26□□□□□ -0.29
SNRPCP13-201ENST00000505417 C8orf58Q8NAV2 365 aa13.26□□□□□ -0.29
SNRPCP13-201ENST00000505417 ARHGEF1Q92888 912 aaKnown RBP13.26□□□□□ -0.29
SNRPCP13-201ENST00000505417 TJP1Q07157 1748 aa13.25□□□□□ -0.29
SNRPCP13-201ENST00000505417 ZBED9Q6R2W3 1325 aa13.25□□□□□ -0.29
SNRPCP13-201ENST00000505417 NBPF26B4DH59 902 aa13.25□□□□□ -0.29
SNRPCP13-201ENST00000505417 HSPA6P17066 643 aa13.25□□□□□ -0.29
SNRPCP13-201ENST00000505417 HNRNPUQ00839 825 aaKnown RBP eCLIP13.25□□□□□ -0.29
SNRPCP13-201ENST00000505417 KRT24Q2M2I5 525 aa13.25□□□□□ -0.29
SNRPCP13-201ENST00000505417 NBPF10Q6P3W6 841 aaKnown RBP13.25□□□□□ -0.29
SNRPCP13-201ENST00000505417 NBPF15Q8N660 670 aa13.25□□□□□ -0.29
SNRPCP13-201ENST00000505417 TSR2Q969E8 191 aaKnown RBP13.25□□□□□ -0.29
SNRPCP13-201ENST00000505417 COL5A3P25940 1745 aaPredicted RBP13.25□□□□□ -0.29
SNRPCP13-201ENST00000505417 PDIA6Q15084 440 aa13.24□□□□□ -0.29
SNRPCP13-201ENST00000505417 LRP10Q7Z4F1 713 aa13.24□□□□□ -0.29
SNRPCP13-201ENST00000505417 DBF4Q9UBU7 674 aaPredicted RBP13.24□□□□□ -0.29
SNRPCP13-201ENST00000505417 TAF1LQ8IZX4 1826 aa13.24□□□□□ -0.29
SNRPCP13-201ENST00000505417 VAMP4O75379 141 aa13.23□□□□□ -0.29
SNRPCP13-201ENST00000505417 CT47B1P0C2W7 299 aaPredicted RBP13.23□□□□□ -0.29
SNRPCP13-201ENST00000505417 CANXP27824 592 aaKnown RBP13.23□□□□□ -0.29
SNRPCP13-201ENST00000505417 RFC4P35249 363 aa13.23□□□□□ -0.29
SNRPCP13-201ENST00000505417 TWISTNBQ3B726 338 aaPredicted RBP13.23□□□□□ -0.29
SNRPCP13-201ENST00000505417 TSPYL6Q8N831 410 aa13.23□□□□□ -0.29
SNRPCP13-201ENST00000505417 ZNF428Q96B54 188 aa13.23□□□□□ -0.29
SNRPCP13-201ENST00000505417 DDX21Q9NR30 783 aaKnown RBP eCLIP13.23□□□□□ -0.29
SNRPCP13-201ENST00000505417 NARFQ9UHQ1 456 aa13.23□□□□□ -0.29
SNRPCP13-201ENST00000505417 EIF2S2P20042 333 aaKnown RBP13.22□□□□□ -0.29
SNRPCP13-201ENST00000505417 EXOSC9Q06265 439 aaKnown RBP13.22□□□□□ -0.29
SNRPCP13-201ENST00000505417 HDGFL1Q5TGJ6 251 aa13.22□□□□□ -0.29
SNRPCP13-201ENST00000505417 CCDC30Q5VVM6 783 aa13.22□□□□□ -0.29
SNRPCP13-201ENST00000505417 NPM2Q86SE8 214 aaKnown RBP13.22□□□□□ -0.29
SNRPCP13-201ENST00000505417 NLGN1Q8N2Q7 840 aa13.22□□□□□ -0.29
SNRPCP13-201ENST00000505417 CDCA7LQ96GN5 454 aa13.22□□□□□ -0.29
SNRPCP13-201ENST00000505417 QSER1Q2KHR3 1735 aa13.22□□□□□ -0.29
SNRPCP13-201ENST00000505417 USP42Q9H9J4 1324 aaKnown RBP13.21□□□□□ -0.29
SNRPCP13-201ENST00000505417 PHF14O94880 888 aa13.21□□□□□ -0.29
SNRPCP13-201ENST00000505417 HYPKQ9NX55 129 aa13.21□□□□□ -0.29
SNRPCP13-201ENST00000505417 ATP10DQ9P241 1426 aa13.21□□□□□ -0.3
SNRPCP13-201ENST00000505417 COL15A1P39059 1388 aa13.2□□□□□ -0.3
SNRPCP13-201ENST00000505417 MYH14Q7Z406 1995 aaKnown RBP13.2□□□□□ -0.3
SNRPCP13-201ENST00000505417 ERVV-1B6SEH8 477 aa13.2□□□□□ -0.3
SNRPCP13-201ENST00000505417 ELL2O00472 640 aaPredicted RBP13.2□□□□□ -0.3
SNRPCP13-201ENST00000505417 ZPR1O75312 459 aa13.2□□□□□ -0.3
SNRPCP13-201ENST00000505417 GYS1P13807 737 aa13.2□□□□□ -0.3
SNRPCP13-201ENST00000505417 YBX3P16989 372 aaKnown RBP eCLIP13.2□□□□□ -0.3
SNRPCP13-201ENST00000505417 CLEC4GQ6UXB4 293 aa13.2□□□□□ -0.3
SNRPCP13-201ENST00000505417 PELP1Q8IZL8 1130 aaKnown RBP13.2□□□□□ -0.3
SNRPCP13-201ENST00000505417 NLGN2Q8NFZ4 835 aa13.2□□□□□ -0.3
SNRPCP13-201ENST00000505417 COL24A1Q17RW2 1714 aa13.19□□□□□ -0.3
SNRPCP13-201ENST00000505417 CAMTA2O94983 1202 aa13.19□□□□□ -0.3
SNRPCP13-201ENST00000505417 SMIM5Q71RC9 77 aa13.19□□□□□ -0.3
SNRPCP13-201ENST00000505417 CHPF2Q9P2E5 772 aa13.19□□□□□ -0.3
SNRPCP13-201ENST00000505417 UBR3Q6ZT12 1888 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms