RNA–Protein interactions for RNA: ENST00000504417.1

ITGA3-203, Transcript of integrin subunit alpha 3, humanhuman

TSL 3

Gene ITGA3, Length 227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-203ENST00000504417 SYT17Q9BSW7 474 aa9.59□□□□□ -0.87
ITGA3-203ENST00000504417 ANKRD36CQ5JPF3 1778 aa9.59□□□□□ -0.87
ITGA3-203ENST00000504417 U2SURPO15042 1029 aaKnown RBP9.58□□□□□ -0.88
ITGA3-203ENST00000504417 HMGB2P26583 209 aaKnown RBP9.58□□□□□ -0.88
ITGA3-203ENST00000504417 SLC39A6Q13433 755 aa9.58□□□□□ -0.88
ITGA3-203ENST00000504417 CNGB1Q14028 1251 aaPredicted RBP9.58□□□□□ -0.88
ITGA3-203ENST00000504417 CFAP53Q96M91 514 aa9.58□□□□□ -0.88
ITGA3-203ENST00000504417 GNPATO15228 680 aa9.57□□□□□ -0.88
ITGA3-203ENST00000504417 RPS6KA4O75676 772 aa9.57□□□□□ -0.88
ITGA3-203ENST00000504417 FCHSD2O94868 740 aa9.57□□□□□ -0.88
ITGA3-203ENST00000504417 CRKLP46109 303 aaKnown RBP9.57□□□□□ -0.88
ITGA3-203ENST00000504417 MSL1Q68DK7 614 aa9.57□□□□□ -0.88
ITGA3-203ENST00000504417 INTS5Q6P9B9 1019 aaKnown RBP9.57□□□□□ -0.88
ITGA3-203ENST00000504417 PPP1R1BQ9UD71 204 aaPredicted RBP9.57□□□□□ -0.88
ITGA3-203ENST00000504417 PXDNLA1KZ92 1463 aa9.57□□□□□ -0.88
ITGA3-203ENST00000504417 SOS1Q07889 1333 aaPredicted RBP9.56□□□□□ -0.88
ITGA3-203ENST00000504417 DICER1Q9UPY3 1922 aaKnown RBP9.56□□□□□ -0.88
ITGA3-203ENST00000504417 HEG1Q9ULI3 1381 aa9.56□□□□□ -0.88
ITGA3-203ENST00000504417 GNAT3A8MTJ3 354 aa9.56□□□□□ -0.88
ITGA3-203ENST00000504417 CYP19A1P11511 503 aaPredicted RBP9.56□□□□□ -0.88
ITGA3-203ENST00000504417 RALBP1Q15311 655 aa9.56□□□□□ -0.88
ITGA3-203ENST00000504417 DNAJC10Q8IXB1 793 aa9.56□□□□□ -0.88
ITGA3-203ENST00000504417 VSIG10Q8N0Z9 540 aa9.56□□□□□ -0.88
ITGA3-203ENST00000504417 PLCD3Q8N3E9 789 aa9.56□□□□□ -0.88
ITGA3-203ENST00000504417 NLGN2Q8NFZ4 835 aa9.56□□□□□ -0.88
ITGA3-203ENST00000504417 PTCD1O75127 700 aaKnown RBP9.55□□□□□ -0.88
ITGA3-203ENST00000504417 PHF14O94880 888 aa9.55□□□□□ -0.88
ITGA3-203ENST00000504417 U2AF1L5P0DN76 240 aaPredicted RBP9.55□□□□□ -0.88
ITGA3-203ENST00000504417 GYS1P13807 737 aa9.55□□□□□ -0.88
ITGA3-203ENST00000504417 U2AF1Q01081 240 aaKnown RBP eCLIP9.55□□□□□ -0.88
ITGA3-203ENST00000504417 DDX10Q13206 875 aaKnown RBP9.55□□□□□ -0.88
ITGA3-203ENST00000504417 MIER1Q8N108 512 aa9.55□□□□□ -0.88
ITGA3-203ENST00000504417 SPOCK2Q92563 424 aa9.55□□□□□ -0.88
ITGA3-203ENST00000504417 ARHGEF1Q92888 912 aaKnown RBP9.55□□□□□ -0.88
ITGA3-203ENST00000504417 NUDCQ9Y266 331 aa9.55□□□□□ -0.88
ITGA3-203ENST00000504417 FER1L6Q2WGJ9 1857 aa9.55□□□□□ -0.88
ITGA3-203ENST00000504417 LAMB2P55268 1798 aa9.55□□□□□ -0.88
ITGA3-203ENST00000504417 MYBBP1AQ9BQG0 1328 aaKnown RBP9.55□□□□□ -0.88
ITGA3-203ENST00000504417 USP42Q9H9J4 1324 aaKnown RBP9.55□□□□□ -0.88
ITGA3-203ENST00000504417 COL15A1P39059 1388 aa9.54□□□□□ -0.88
ITGA3-203ENST00000504417 CACNA1FO60840 1977 aa9.54□□□□□ -0.88
ITGA3-203ENST00000504417 KCNQ3O43525 872 aa9.54□□□□□ -0.88
ITGA3-203ENST00000504417 POLD1P28340 1107 aa9.54□□□□□ -0.88
ITGA3-203ENST00000504417 KLHL34Q8N239 644 aa9.54□□□□□ -0.88
ITGA3-203ENST00000504417 ZNF496Q96IT1 587 aaPredicted RBP9.54□□□□□ -0.88
ITGA3-203ENST00000504417 ZBTB1Q9Y2K1 713 aa9.54□□□□□ -0.88
ITGA3-203ENST00000504417 TNRC6CQ9HCJ0 1690 aaKnown RBP9.53□□□□□ -0.88
ITGA3-203ENST00000504417 HTATSF1O43719 755 aaKnown RBP9.53□□□□□ -0.88
ITGA3-203ENST00000504417 ZNF790Q6PG37 636 aa9.53□□□□□ -0.88
ITGA3-203ENST00000504417 CCDC87Q9NVE4 849 aa9.53□□□□□ -0.88
ITGA3-203ENST00000504417 RTCBQ9Y3I0 505 aaKnown RBP9.53□□□□□ -0.88
ITGA3-203ENST00000504417 MCM10Q7L590 875 aa9.52□□□□□ -0.89
ITGA3-203ENST00000504417 PRKRIP1Q9H875 184 aaPredicted RBP9.52□□□□□ -0.89
ITGA3-203ENST00000504417 BCL2L12Q9HB09 334 aa9.52□□□□□ -0.89
ITGA3-203ENST00000504417 SRP68Q9UHB9 627 aaKnown RBP9.52□□□□□ -0.89
ITGA3-203ENST00000504417 CD2APQ9Y5K6 639 aa9.52□□□□□ -0.89
ITGA3-203ENST00000504417 TIAM2Q8IVF5 1701 aa9.51□□□□□ -0.89
ITGA3-203ENST00000504417 MMP10P09238 476 aa9.51□□□□□ -0.89
ITGA3-203ENST00000504417 YBX3P16989 372 aaKnown RBP eCLIP9.51□□□□□ -0.89
ITGA3-203ENST00000504417 EIF5P55010 431 aaKnown RBP9.51□□□□□ -0.89
ITGA3-203ENST00000504417 DDR1Q08345 913 aa9.51□□□□□ -0.89
ITGA3-203ENST00000504417 DCTN1Q14203 1278 aa9.51□□□□□ -0.89
ITGA3-203ENST00000504417 NFE2L2Q16236 605 aa9.51□□□□□ -0.89
ITGA3-203ENST00000504417 TRAPPC3LQ5T215 181 aa9.51□□□□□ -0.89
ITGA3-203ENST00000504417 SLX4Q8IY92 1834 aa9.51□□□□□ -0.89
ITGA3-203ENST00000504417 ADCY9O60503 1353 aa9.5□□□□□ -0.89
ITGA3-203ENST00000504417 PRAMEF22A3QJZ6 481 aa9.5□□□□□ -0.89
ITGA3-203ENST00000504417 TM4SF1P30408 202 aa9.5□□□□□ -0.89
ITGA3-203ENST00000504417 TEFQ10587 303 aa9.5□□□□□ -0.89
ITGA3-203ENST00000504417 SPDYE1Q8NFV5 336 aaPredicted RBP9.5□□□□□ -0.89
ITGA3-203ENST00000504417 POLRMTO00411 1230 aaKnown RBP9.49□□□□□ -0.89
ITGA3-203ENST00000504417 ZEB1P37275 1124 aaPredicted RBP9.49□□□□□ -0.89
ITGA3-203ENST00000504417 FMNL2Q96PY5 1086 aa9.49□□□□□ -0.89
ITGA3-203ENST00000504417 NARFQ9UHQ1 456 aa9.49□□□□□ -0.89
ITGA3-203ENST00000504417 CARMIL3Q8ND23 1372 aa9.49□□□□□ -0.89
ITGA3-203ENST00000504417 DDX60Q8IY21 1712 aaKnown RBP9.48□□□□□ -0.89
ITGA3-203ENST00000504417 BTBD11A6QL63 1104 aa9.48□□□□□ -0.89
ITGA3-203ENST00000504417 USPL1Q5W0Q7 1092 aa9.48□□□□□ -0.89
ITGA3-203ENST00000504417 REM2Q8IYK8 340 aaPredicted RBP9.48□□□□□ -0.89
ITGA3-203ENST00000504417 NLGN1Q8N2Q7 840 aa9.48□□□□□ -0.89
ITGA3-203ENST00000504417 THUMPD2Q9BTF0 503 aaKnown RBP9.48□□□□□ -0.89
ITGA3-203ENST00000504417 KCNA3P22001 575 aa9.47□□□□□ -0.89
ITGA3-203ENST00000504417 RFC4P35249 363 aa9.47□□□□□ -0.89
ITGA3-203ENST00000504417 TMPOP42166 694 aaKnown RBP9.47□□□□□ -0.89
ITGA3-203ENST00000504417 TTC5Q8N0Z6 440 aa9.47□□□□□ -0.89
ITGA3-203ENST00000504417 USP16Q9Y5T5 823 aa9.47□□□□□ -0.89
ITGA3-203ENST00000504417 NBPF26B4DH59 902 aa9.46□□□□□ -0.9
ITGA3-203ENST00000504417 CAMTA2O94983 1202 aa9.46□□□□□ -0.9
ITGA3-203ENST00000504417 A1BGP04217 495 aa9.46□□□□□ -0.9
ITGA3-203ENST00000504417 IL6STP40189 918 aaPredicted RBP9.46□□□□□ -0.9
ITGA3-203ENST00000504417 EIF4A1P60842 406 aaKnown RBP9.46□□□□□ -0.9
ITGA3-203ENST00000504417 NFIXQ14938 502 aa9.46□□□□□ -0.9
ITGA3-203ENST00000504417 TAF7Q15545 349 aaPredicted RBP9.46□□□□□ -0.9
ITGA3-203ENST00000504417 NBPF10Q6P3W6 841 aaKnown RBP9.46□□□□□ -0.9
ITGA3-203ENST00000504417 LRP10Q7Z4F1 713 aa9.46□□□□□ -0.9
ITGA3-203ENST00000504417 NBPF15Q8N660 670 aa9.46□□□□□ -0.9
ITGA3-203ENST00000504417 TEX13AQ9BXU3 409 aaPredicted RBP9.46□□□□□ -0.9
ITGA3-203ENST00000504417 TRIM35Q9UPQ4 493 aa9.46□□□□□ -0.9
ITGA3-203ENST00000504417 TAF1P21675 1872 aa9.46□□□□□ -0.9
ITGA3-203ENST00000504417 MYH3P11055 1940 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms