RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 CYP19A1P11511 503 aaPredicted RBP10.18□□□□□ -0.78
SKP2-203ENST00000504386 CCDC146Q8IYE0 955 aa10.18□□□□□ -0.78
SKP2-203ENST00000504386 SLC4A9Q96Q91 983 aa10.18□□□□□ -0.78
SKP2-203ENST00000504386 ERBB4Q15303 1308 aa10.17□□□□□ -0.78
SKP2-203ENST00000504386 RGL2O15211 777 aa10.17□□□□□ -0.78
SKP2-203ENST00000504386 DCTN1Q14203 1278 aa10.17□□□□□ -0.78
SKP2-203ENST00000504386 NEUROD2Q15784 382 aa10.17□□□□□ -0.78
SKP2-203ENST00000504386 TSPYL4Q9UJ04 414 aa10.17□□□□□ -0.78
SKP2-203ENST00000504386 SOS1Q07889 1333 aaPredicted RBP10.16□□□□□ -0.78
SKP2-203ENST00000504386 IL6STP40189 918 aaPredicted RBP10.16□□□□□ -0.78
SKP2-203ENST00000504386 PTGER2P43116 358 aa10.16□□□□□ -0.78
SKP2-203ENST00000504386 CCDC27Q2M243 656 aa10.16□□□□□ -0.78
SKP2-203ENST00000504386 ARHGEF1Q92888 912 aaKnown RBP10.16□□□□□ -0.78
SKP2-203ENST00000504386 SGIP1Q9BQI5 828 aa10.16□□□□□ -0.78
SKP2-203ENST00000504386 UBR2Q8IWV8 1755 aa10.16□□□□□ -0.78
SKP2-203ENST00000504386 COL15A1P39059 1388 aa10.15□□□□□ -0.78
SKP2-203ENST00000504386 VIRMAQ69YN4 1812 aaKnown RBP10.15□□□□□ -0.78
SKP2-203ENST00000504386 CCER2I3L3R5 266 aa10.15□□□□□ -0.78
SKP2-203ENST00000504386 APAF1O14727 1248 aa10.15□□□□□ -0.78
SKP2-203ENST00000504386 HOXB7P09629 217 aa10.15□□□□□ -0.78
SKP2-203ENST00000504386 GNAI1P63096 354 aa10.15□□□□□ -0.78
SKP2-203ENST00000504386 INTS5Q6P9B9 1019 aaKnown RBP10.15□□□□□ -0.78
SKP2-203ENST00000504386 CFAP44Q96MT7 982 aa10.15□□□□□ -0.78
SKP2-203ENST00000504386 PDGFDQ9GZP0 370 aaPredicted RBP10.15□□□□□ -0.78
SKP2-203ENST00000504386 ZNF652Q9Y2D9 606 aa10.15□□□□□ -0.78
SKP2-203ENST00000504386 SIPA1L3O60292 1781 aaPredicted RBP10.15□□□□□ -0.78
SKP2-203ENST00000504386 COL5A3P25940 1745 aaPredicted RBP10.15□□□□□ -0.78
SKP2-203ENST00000504386 UBR3Q6ZT12 1888 aa10.15□□□□□ -0.79
SKP2-203ENST00000504386 USP42Q9H9J4 1324 aaKnown RBP10.14□□□□□ -0.79
SKP2-203ENST00000504386 CANXP27824 592 aaKnown RBP10.14□□□□□ -0.79
SKP2-203ENST00000504386 EIF4A1P60842 406 aaKnown RBP10.14□□□□□ -0.79
SKP2-203ENST00000504386 IFT57Q9NWB7 429 aa10.14□□□□□ -0.79
SKP2-203ENST00000504386 NARFQ9UHQ1 456 aa10.14□□□□□ -0.79
SKP2-203ENST00000504386 RRP7AQ9Y3A4 280 aaKnown RBP10.14□□□□□ -0.79
SKP2-203ENST00000504386 CD2APQ9Y5K6 639 aa10.14□□□□□ -0.79
SKP2-203ENST00000504386 PARP3Q9Y6F1 533 aa10.14□□□□□ -0.79
SKP2-203ENST00000504386 U3KPZ7 1027 aaPredicted RBP10.14□□□□□ -0.79
SKP2-203ENST00000504386 TJP1Q07157 1748 aa10.13□□□□□ -0.79
SKP2-203ENST00000504386 CHL1O00533 1208 aa10.13□□□□□ -0.79
SKP2-203ENST00000504386 GIGYF1O75420 1035 aaPredicted RBP10.13□□□□□ -0.79
SKP2-203ENST00000504386 MYCNP04198 464 aaPredicted RBP10.13□□□□□ -0.79
SKP2-203ENST00000504386 EIF5P55010 431 aaKnown RBP10.13□□□□□ -0.79
SKP2-203ENST00000504386 MSL1Q68DK7 614 aa10.13□□□□□ -0.79
SKP2-203ENST00000504386 THUMPD2Q9BTF0 503 aaKnown RBP10.13□□□□□ -0.79
SKP2-203ENST00000504386 FHDC1Q9C0D6 1143 aaPredicted RBP10.13□□□□□ -0.79
SKP2-203ENST00000504386 TRIM35Q9UPQ4 493 aa10.13□□□□□ -0.79
SKP2-203ENST00000504386 ZBTB1Q9Y2K1 713 aa10.13□□□□□ -0.79
SKP2-203ENST00000504386 TUBGCP6Q96RT7 1819 aa10.12□□□□□ -0.79
SKP2-203ENST00000504386 IL16Q14005 1332 aa10.12□□□□□ -0.79
SKP2-203ENST00000504386 DLG5Q8TDM6 1919 aa10.12□□□□□ -0.79
SKP2-203ENST00000504386 MMP10P09238 476 aa10.12□□□□□ -0.79
SKP2-203ENST00000504386 GYS1P13807 737 aa10.12□□□□□ -0.79
SKP2-203ENST00000504386 CLEC4GQ6UXB4 293 aa10.12□□□□□ -0.79
SKP2-203ENST00000504386 KLHL34Q8N239 644 aa10.12□□□□□ -0.79
SKP2-203ENST00000504386 SYT17Q9BSW7 474 aa10.12□□□□□ -0.79
SKP2-203ENST00000504386 ZNF330Q9Y3S2 320 aaPredicted RBP10.12□□□□□ -0.79
SKP2-203ENST00000504386 LAS1LQ9Y4W2 734 aaKnown RBP10.12□□□□□ -0.79
SKP2-203ENST00000504386 KCNQ3O43525 872 aa10.11□□□□□ -0.79
SKP2-203ENST00000504386 POTEHQ6S545 545 aa10.11□□□□□ -0.79
SKP2-203ENST00000504386 DZIP3Q86Y13 1208 aaKnown RBP10.11□□□□□ -0.79
SKP2-203ENST00000504386 FAM9BQ8IZU0 186 aa10.11□□□□□ -0.79
SKP2-203ENST00000504386 MIS18AQ9NYP9 233 aa10.11□□□□□ -0.79
SKP2-203ENST00000504386 PDZRN3Q9UPQ7 1066 aa10.11□□□□□ -0.79
SKP2-203ENST00000504386 USP16Q9Y5T5 823 aa10.11□□□□□ -0.79
SKP2-203ENST00000504386 COL24A1Q17RW2 1714 aa10.1□□□□□ -0.79
SKP2-203ENST00000504386 A1BGP04217 495 aa10.1□□□□□ -0.79
SKP2-203ENST00000504386 USPL1Q5W0Q7 1092 aa10.1□□□□□ -0.79
SKP2-203ENST00000504386 DIEXFQ68CQ4 756 aaKnown RBP10.1□□□□□ -0.79
SKP2-203ENST00000504386 KIF6Q6ZMV9 814 aa10.1□□□□□ -0.79
SKP2-203ENST00000504386 WDR63Q8IWG1 891 aa10.1□□□□□ -0.79
SKP2-203ENST00000504386 KDM3BQ7LBC6 1761 aa10.1□□□□□ -0.79
SKP2-203ENST00000504386 ERVV-1B6SEH8 477 aa10.09□□□□□ -0.79
SKP2-203ENST00000504386 NPHP1O15259 732 aa10.09□□□□□ -0.79
SKP2-203ENST00000504386 TGFB2P61812 414 aa10.09□□□□□ -0.79
SKP2-203ENST00000504386 CCDC184Q52MB2 194 aa10.09□□□□□ -0.79
SKP2-203ENST00000504386 AMIGO3Q86WK7 504 aa10.09□□□□□ -0.79
SKP2-203ENST00000504386 WWC1Q8IX03 1113 aa10.09□□□□□ -0.79
SKP2-203ENST00000504386 MYH14Q7Z406 1995 aaKnown RBP10.08□□□□□ -0.8
SKP2-203ENST00000504386 GRIN3BO60391 1043 aa10.08□□□□□ -0.8
SKP2-203ENST00000504386 ZNF853P0CG23 659 aa10.08□□□□□ -0.8
SKP2-203ENST00000504386 FKBP8Q14318 412 aa10.08□□□□□ -0.8
SKP2-203ENST00000504386 SETDB2Q96T68 719 aa10.08□□□□□ -0.8
SKP2-203ENST00000504386 MYH16Q9H6N6 1097 aa10.08□□□□□ -0.8
SKP2-203ENST00000504386 MBIPQ9NS73 344 aa10.08□□□□□ -0.8
SKP2-203ENST00000504386 DBF4Q9UBU7 674 aaPredicted RBP10.08□□□□□ -0.8
SKP2-203ENST00000504386 SRP68Q9UHB9 627 aaKnown RBP10.08□□□□□ -0.8
SKP2-203ENST00000504386 CARMIL3Q8ND23 1372 aa10.08□□□□□ -0.8
SKP2-203ENST00000504386 LAMB4A4D0S4 1761 aa10.08□□□□□ -0.8
SKP2-203ENST00000504386 EIF2S2P20042 333 aaKnown RBP10.07□□□□□ -0.8
SKP2-203ENST00000504386 TM4SF1P30408 202 aa10.07□□□□□ -0.8
SKP2-203ENST00000504386 GPR162Q16538 588 aa10.07□□□□□ -0.8
SKP2-203ENST00000504386 HSP90AB3PQ58FF7 597 aa10.07□□□□□ -0.8
SKP2-203ENST00000504386 HDGFL1Q5TGJ6 251 aa10.07□□□□□ -0.8
SKP2-203ENST00000504386 DDX21Q9NR30 783 aaKnown RBP eCLIP10.07□□□□□ -0.8
SKP2-203ENST00000504386 HYPKQ9NX55 129 aa10.07□□□□□ -0.8
SKP2-203ENST00000504386 TBC1D2BQ9UPU7 963 aa10.07□□□□□ -0.8
SKP2-203ENST00000504386 POLRMTO00411 1230 aaKnown RBP10.06□□□□□ -0.8
SKP2-203ENST00000504386 CAMTA2O94983 1202 aa10.06□□□□□ -0.8
SKP2-203ENST00000504386 ST5P78524 1137 aa10.06□□□□□ -0.8
SKP2-203ENST00000504386 NFIXQ14938 502 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms