RNA–Protein interactions for RNA: ENST00000504010.5

NR1I3-219, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 944 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-219ENST00000504010 SIK1P57059 783 aa12□□□□□ -0.49
NR1I3-219ENST00000504010 ZNF530Q6P9A1 599 aaPredicted RBP12□□□□□ -0.49
NR1I3-219ENST00000504010 RRAGCQ9HB90 399 aa12□□□□□ -0.49
NR1I3-219ENST00000504010 DPEP1P16444 411 aa11.99□□□□□ -0.49
NR1I3-219ENST00000504010 NEUROD2Q15784 382 aa11.99□□□□□ -0.49
NR1I3-219ENST00000504010 PLEKHO1Q53GL0 409 aaPredicted RBP11.99□□□□□ -0.49
NR1I3-219ENST00000504010 LINC00116Q8NCU8 138 aa11.99□□□□□ -0.49
NR1I3-219ENST00000504010 PIM2Q9P1W9 311 aa11.99□□□□□ -0.49
NR1I3-219ENST00000504010 SALL2Q9Y467 1007 aaPredicted RBP11.99□□□□□ -0.49
NR1I3-219ENST00000504010 KDRP35968 1356 aa11.99□□□□□ -0.49
NR1I3-219ENST00000504010 C4AP0C0L4 1744 aa11.98□□□□□ -0.49
NR1I3-219ENST00000504010 PIGBQ92521 554 aa11.98□□□□□ -0.49
NR1I3-219ENST00000504010 DCAF5Q96JK2 942 aa11.98□□□□□ -0.49
NR1I3-219ENST00000504010 PLEKHF1Q96S99 279 aa11.98□□□□□ -0.49
NR1I3-219ENST00000504010 RNF181Q9P0P0 153 aa11.98□□□□□ -0.49
NR1I3-219ENST00000504010 SPG7Q9UQ90 795 aa11.98□□□□□ -0.49
NR1I3-219ENST00000504010 SBF1O95248 1867 aa11.97□□□□□ -0.49
NR1I3-219ENST00000504010 CCER2I3L3R5 266 aa11.97□□□□□ -0.49
NR1I3-219ENST00000504010 VEGFAP15692 232 aaPredicted RBP11.97□□□□□ -0.49
NR1I3-219ENST00000504010 DCTN1Q14203 1278 aa11.97□□□□□ -0.49
NR1I3-219ENST00000504010 NKX1-1Q15270 411 aaPredicted RBP11.97□□□□□ -0.49
NR1I3-219ENST00000504010 DALRD3Q5D0E6 543 aaKnown RBP11.97□□□□□ -0.49
NR1I3-219ENST00000504010 TRAPPC3LQ5T215 181 aa11.97□□□□□ -0.49
NR1I3-219ENST00000504010 RTCBQ9Y3I0 505 aaKnown RBP11.97□□□□□ -0.49
NR1I3-219ENST00000504010 PARP3Q9Y6F1 533 aa11.97□□□□□ -0.49
NR1I3-219ENST00000504010 PHKG2P15735 406 aa11.96□□□□□ -0.49
NR1I3-219ENST00000504010 KCNA3P22001 575 aa11.96□□□□□ -0.49
NR1I3-219ENST00000504010 SMIM5Q71RC9 77 aa11.96□□□□□ -0.49
NR1I3-219ENST00000504010 LGR6Q9HBX8 967 aa11.96□□□□□ -0.49
NR1I3-219ENST00000504010 PRDM10Q9NQV6 1147 aa11.96□□□□□ -0.49
NR1I3-219ENST00000504010 MAPK8IP3Q9UPT6 1336 aa11.95□□□□□ -0.5
NR1I3-219ENST00000504010 ZNF831Q5JPB2 1677 aa11.95□□□□□ -0.5
NR1I3-219ENST00000504010 APAF1O14727 1248 aa11.95□□□□□ -0.5
NR1I3-219ENST00000504010 ATP6V1AP38606 617 aa11.95□□□□□ -0.5
NR1I3-219ENST00000504010 C1orf141Q5JVX7 400 aa11.95□□□□□ -0.5
NR1I3-219ENST00000504010 THUMPD2Q9BTF0 503 aaKnown RBP11.95□□□□□ -0.5
NR1I3-219ENST00000504010 TMOD3Q9NYL9 352 aa11.95□□□□□ -0.5
NR1I3-219ENST00000504010 ITPK1Q13572 414 aa11.94□□□□□ -0.5
NR1I3-219ENST00000504010 RC3H1Q5TC82 1133 aaKnown RBP11.94□□□□□ -0.5
NR1I3-219ENST00000504010 MCM10Q7L590 875 aa11.94□□□□□ -0.5
NR1I3-219ENST00000504010 IFNL2Q8IZJ0 200 aa11.94□□□□□ -0.5
NR1I3-219ENST00000504010 RUNDC1Q96C34 613 aa11.94□□□□□ -0.5
NR1I3-219ENST00000504010 GLTPD2A6NH11 291 aa11.93□□□□□ -0.5
NR1I3-219ENST00000504010 NEFMP07197 916 aa11.93□□□□□ -0.5
NR1I3-219ENST00000504010 GYS1P13807 737 aa11.93□□□□□ -0.5
NR1I3-219ENST00000504010 RFC4P35249 363 aa11.93□□□□□ -0.5
NR1I3-219ENST00000504010 AMOTQ4VCS5 1084 aa11.93□□□□□ -0.5
NR1I3-219ENST00000504010 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.93□□□□□ -0.5
NR1I3-219ENST00000504010 KDM6AO15550 1401 aaPredicted RBP11.93□□□□□ -0.5
NR1I3-219ENST00000504010 TMPOP42166 694 aaKnown RBP11.92□□□□□ -0.5
NR1I3-219ENST00000504010 RIPK4P57078 832 aa11.92□□□□□ -0.5
NR1I3-219ENST00000504010 NFE2L2Q16236 605 aa11.92□□□□□ -0.5
NR1I3-219ENST00000504010 AKAP4Q5JQC9 854 aa11.92□□□□□ -0.5
NR1I3-219ENST00000504010 SAMD1Q6SPF0 538 aaPredicted RBP11.92□□□□□ -0.5
NR1I3-219ENST00000504010 GAS2L2Q8NHY3 880 aa11.92□□□□□ -0.5
NR1I3-219ENST00000504010 CREBZFQ9NS37 354 aa11.92□□□□□ -0.5
NR1I3-219ENST00000504010 GNAT3A8MTJ3 354 aa11.91□□□□□ -0.5
NR1I3-219ENST00000504010 RNMTO43148 476 aaKnown RBP11.91□□□□□ -0.5
NR1I3-219ENST00000504010 LMNB1P20700 586 aa11.91□□□□□ -0.5
NR1I3-219ENST00000504010 IL17REQ8NFR9 667 aa11.91□□□□□ -0.5
NR1I3-219ENST00000504010 ARHGEF1Q92888 912 aaKnown RBP11.91□□□□□ -0.5
NR1I3-219ENST00000504010 ASAP1Q9ULH1 1129 aa11.91□□□□□ -0.5
NR1I3-219ENST00000504010 CNTNAP4Q9C0A0 1308 aa11.9□□□□□ -0.5
NR1I3-219ENST00000504010 RPS6KA4O75676 772 aa11.9□□□□□ -0.5
NR1I3-219ENST00000504010 CTCFP49711 727 aaPredicted RBP11.9□□□□□ -0.5
NR1I3-219ENST00000504010 PNNQ9H307 717 aaKnown RBP11.9□□□□□ -0.5
NR1I3-219ENST00000504010 ATG3Q9NT62 314 aa11.9□□□□□ -0.5
NR1I3-219ENST00000504010 DLG5Q8TDM6 1919 aa11.9□□□□□ -0.51
NR1I3-219ENST00000504010 COL5A3P25940 1745 aaPredicted RBP11.89□□□□□ -0.51
NR1I3-219ENST00000504010 AIDAQ96BJ3 306 aa11.89□□□□□ -0.51
NR1I3-219ENST00000504010 MIS18AQ9NYP9 233 aa11.89□□□□□ -0.51
NR1I3-219ENST00000504010 TRIM35Q9UPQ4 493 aa11.89□□□□□ -0.51
NR1I3-219ENST00000504010 FOXN1O15353 648 aa11.88□□□□□ -0.51
NR1I3-219ENST00000504010 CABP4P57796 275 aa11.88□□□□□ -0.51
NR1I3-219ENST00000504010 SLC39A6Q13433 755 aa11.88□□□□□ -0.51
NR1I3-219ENST00000504010 NFATC2IPQ8NCF5 419 aa11.88□□□□□ -0.51
NR1I3-219ENST00000504010 RTF1Q92541 710 aaKnown RBP11.88□□□□□ -0.51
NR1I3-219ENST00000504010 YTHDC1Q96MU7 727 aaKnown RBP11.88□□□□□ -0.51
NR1I3-219ENST00000504010 LAS1LQ9Y4W2 734 aaKnown RBP11.88□□□□□ -0.51
NR1I3-219ENST00000504010 KCNQ3O43525 872 aa11.87□□□□□ -0.51
NR1I3-219ENST00000504010 DPY19L2Q6NUT2 758 aa11.87□□□□□ -0.51
NR1I3-219ENST00000504010 TIAM2Q8IVF5 1701 aa11.86□□□□□ -0.51
NR1I3-219ENST00000504010 HSP90AB1P08238 724 aaKnown RBP11.86□□□□□ -0.51
NR1I3-219ENST00000504010 FAM161AQ3B820 660 aa11.86□□□□□ -0.51
NR1I3-219ENST00000504010 CNTNAP1P78357 1384 aa11.86□□□□□ -0.51
NR1I3-219ENST00000504010 TNRC18O15417 2968 aaPredicted RBP11.86□□□□□ -0.51
NR1I3-219ENST00000504010 VIRMAQ69YN4 1812 aaKnown RBP11.86□□□□□ -0.51
NR1I3-219ENST00000504010 ERVV-2B6SEH9 535 aa11.85□□□□□ -0.51
NR1I3-219ENST00000504010 CHRNA5P30532 468 aa11.85□□□□□ -0.51
NR1I3-219ENST00000504010 TEFQ10587 303 aa11.85□□□□□ -0.51
NR1I3-219ENST00000504010 CHADLQ6NUI6 762 aa11.85□□□□□ -0.51
NR1I3-219ENST00000504010 SLC52A2Q9HAB3 445 aa11.85□□□□□ -0.51
NR1I3-219ENST00000504010 MKRN1Q9UHC7 482 aaKnown RBP11.85□□□□□ -0.51
NR1I3-219ENST00000504010 MYH14Q7Z406 1995 aaKnown RBP11.85□□□□□ -0.51
NR1I3-219ENST00000504010 USP42Q9H9J4 1324 aaKnown RBP11.85□□□□□ -0.51
NR1I3-219ENST00000504010 SCN11AQ9UI33 1791 aa11.84□□□□□ -0.51
NR1I3-219ENST00000504010 HNRNPUQ00839 825 aaKnown RBP eCLIP11.84□□□□□ -0.51
NR1I3-219ENST00000504010 RASSF7Q02833 373 aa11.84□□□□□ -0.51
NR1I3-219ENST00000504010 MLLT1Q03111 559 aaPredicted RBP11.84□□□□□ -0.51
NR1I3-219ENST00000504010 DDR1Q08345 913 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms