RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 IGFBP4P22692 258 aa11□□□□□ -0.65
NIPBL-203ENST00000503274 WEE1P30291 646 aa11□□□□□ -0.65
NIPBL-203ENST00000503274 PLA2G4AP47712 749 aa11□□□□□ -0.65
NIPBL-203ENST00000503274 TEAD4Q15561 434 aa11□□□□□ -0.65
NIPBL-203ENST00000503274 USTQ9Y2C2 406 aa11□□□□□ -0.65
NIPBL-203ENST00000503274 SENP3-EIF4A1A0A087X0R7 540 aa10.99□□□□□ -0.65
NIPBL-203ENST00000503274 NOS2P35228 1153 aa10.99□□□□□ -0.65
NIPBL-203ENST00000503274 CHMP3Q9Y3E7 222 aa10.99□□□□□ -0.65
NIPBL-203ENST00000503274 SLC35F4A4IF30 521 aa10.98□□□□□ -0.65
NIPBL-203ENST00000503274 PRMT3O60678 531 aa10.98□□□□□ -0.65
NIPBL-203ENST00000503274 ZDHHC1Q8WTX9 485 aa10.98□□□□□ -0.65
NIPBL-203ENST00000503274 CHMP7Q8WUX9 453 aaPredicted RBP10.98□□□□□ -0.65
NIPBL-203ENST00000503274 L3MBTL2Q969R5 705 aa10.98□□□□□ -0.65
NIPBL-203ENST00000503274 PRIMPOLQ96LW4 560 aa10.98□□□□□ -0.65
NIPBL-203ENST00000503274 DYRK1BQ9Y463 629 aa10.98□□□□□ -0.65
NIPBL-203ENST00000503274 PARP3Q9Y6F1 533 aa10.98□□□□□ -0.65
NIPBL-203ENST00000503274 SERTM1A2A2V5 107 aa10.97□□□□□ -0.65
NIPBL-203ENST00000503274 CARNS1A5YM72 827 aa10.97□□□□□ -0.65
NIPBL-203ENST00000503274 PDE4CQ08493 712 aa10.97□□□□□ -0.65
NIPBL-203ENST00000503274 STAG2Q8N3U4 1231 aa10.97□□□□□ -0.65
NIPBL-203ENST00000503274 ZNF232Q9UNY5 417 aa10.97□□□□□ -0.65
NIPBL-203ENST00000503274 A0A1B0GTH6 734 aa10.96□□□□□ -0.65
NIPBL-203ENST00000503274 OCLNQ16625 522 aa10.96□□□□□ -0.65
NIPBL-203ENST00000503274 CCDC155Q8N6L0 562 aa10.96□□□□□ -0.65
NIPBL-203ENST00000503274 AIDAQ96BJ3 306 aa10.96□□□□□ -0.65
NIPBL-203ENST00000503274 SLAIN2Q9P270 581 aa10.96□□□□□ -0.65
NIPBL-203ENST00000503274 EML1O00423 815 aa10.95□□□□□ -0.66
NIPBL-203ENST00000503274 INSM1Q01101 510 aaPredicted RBP10.95□□□□□ -0.66
NIPBL-203ENST00000503274 NBPF1Q3BBV0 1214 aa10.95□□□□□ -0.66
NIPBL-203ENST00000503274 POTEAQ6S8J7 498 aa10.95□□□□□ -0.66
NIPBL-203ENST00000503274 GAS2L1Q99501 681 aaPredicted RBP10.95□□□□□ -0.66
NIPBL-203ENST00000503274 C2orf49Q9BVC5 232 aaPredicted RBP10.95□□□□□ -0.66
NIPBL-203ENST00000503274 FOXO3O43524 673 aa10.94□□□□□ -0.66
NIPBL-203ENST00000503274 VEGFBP49765 207 aa10.94□□□□□ -0.66
NIPBL-203ENST00000503274 NXF1Q9UBU9 619 aaKnown RBP10.94□□□□□ -0.66
NIPBL-203ENST00000503274 STK17AQ9UEE5 414 aa10.94□□□□□ -0.66
NIPBL-203ENST00000503274 WIPF1O43516 503 aa10.93□□□□□ -0.66
NIPBL-203ENST00000503274 F11P03951 625 aa10.93□□□□□ -0.66
NIPBL-203ENST00000503274 ATP2B4P23634 1241 aa10.93□□□□□ -0.66
NIPBL-203ENST00000503274 MSX1P28360 303 aa10.93□□□□□ -0.66
NIPBL-203ENST00000503274 HIRAP54198 1017 aaPredicted RBP10.93□□□□□ -0.66
NIPBL-203ENST00000503274 SH3PXD2AQ5TCZ1 1133 aa10.93□□□□□ -0.66
NIPBL-203ENST00000503274 ZDHHC3Q9NYG2 299 aa10.93□□□□□ -0.66
NIPBL-203ENST00000503274 CXXC1Q9P0U4 656 aaPredicted RBP10.93□□□□□ -0.66
NIPBL-203ENST00000503274 PPFIA3O75145 1194 aa10.92□□□□□ -0.66
NIPBL-203ENST00000503274 C1orf216Q8TAB5 229 aa10.92□□□□□ -0.66
NIPBL-203ENST00000503274 HCN4Q9Y3Q4 1203 aa10.92□□□□□ -0.66
NIPBL-203ENST00000503274 TATP17735 454 aaPredicted RBP10.91□□□□□ -0.66
NIPBL-203ENST00000503274 TXLNAP40222 546 aa10.91□□□□□ -0.66
NIPBL-203ENST00000503274 FKBP5Q13451 457 aaPredicted RBP10.91□□□□□ -0.66
NIPBL-203ENST00000503274 VTI1AQ96AJ9 217 aa10.91□□□□□ -0.66
NIPBL-203ENST00000503274 GPAMQ9HCL2 828 aa10.91□□□□□ -0.66
NIPBL-203ENST00000503274 ITGA6P23229 1130 aa10.9□□□□□ -0.66
NIPBL-203ENST00000503274 RIPOR1Q6ZS17 1223 aa10.9□□□□□ -0.66
NIPBL-203ENST00000503274 NPAS3Q8IXF0 933 aa10.9□□□□□ -0.66
NIPBL-203ENST00000503274 ATP4AP20648 1035 aa10.89□□□□□ -0.67
NIPBL-203ENST00000503274 SSFA2P28290 1259 aa10.89□□□□□ -0.67
NIPBL-203ENST00000503274 C1orf53Q5VUE5 145 aa10.89□□□□□ -0.67
NIPBL-203ENST00000503274 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.89□□□□□ -0.67
NIPBL-203ENST00000503274 ALDH16A1Q8IZ83 802 aa10.88□□□□□ -0.67
NIPBL-203ENST00000503274 PGBD3Q8N328 593 aa10.88□□□□□ -0.67
NIPBL-203ENST00000503274 PHACTR1Q9C0D0 580 aa10.88□□□□□ -0.67
NIPBL-203ENST00000503274 H3BM21 787 aa10.87□□□□□ -0.67
NIPBL-203ENST00000503274 H7C1W4 665 aa10.87□□□□□ -0.67
NIPBL-203ENST00000503274 ARSJQ5FYB0 599 aaPredicted RBP10.87□□□□□ -0.67
NIPBL-203ENST00000503274 B4GALNT3Q6L9W6 998 aa10.87□□□□□ -0.67
NIPBL-203ENST00000503274 NGLY1Q96IV0 654 aa10.87□□□□□ -0.67
NIPBL-203ENST00000503274 CRISPLD1Q9H336 500 aa10.87□□□□□ -0.67
NIPBL-203ENST00000503274 RUBCNLQ9H714 662 aa10.87□□□□□ -0.67
NIPBL-203ENST00000503274 CUEDC1Q9NWM3 386 aaPredicted RBP10.87□□□□□ -0.67
NIPBL-203ENST00000503274 BICDL1Q6ZP65 573 aa10.86□□□□□ -0.67
NIPBL-203ENST00000503274 TRIM22Q8IYM9 498 aa10.86□□□□□ -0.67
NIPBL-203ENST00000503274 SLC16A10Q8TF71 515 aa10.86□□□□□ -0.67
NIPBL-203ENST00000503274 COL26A1Q96A83 441 aa10.86□□□□□ -0.67
NIPBL-203ENST00000503274 GMCL1Q96IK5 515 aa10.86□□□□□ -0.67
NIPBL-203ENST00000503274 ZIC5Q96T25 663 aa10.86□□□□□ -0.67
NIPBL-203ENST00000503274 MKNK1Q9BUB5 465 aa10.86□□□□□ -0.67
NIPBL-203ENST00000503274 ERBB4Q15303 1308 aa10.85□□□□□ -0.67
NIPBL-203ENST00000503274 PTCD1O75127 700 aaKnown RBP10.85□□□□□ -0.67
NIPBL-203ENST00000503274 DBN1Q16643 649 aa10.85□□□□□ -0.67
NIPBL-203ENST00000503274 RHPN1Q8TCX5 695 aa10.85□□□□□ -0.67
NIPBL-203ENST00000503274 C7orf43Q8WVR3 580 aa10.85□□□□□ -0.67
NIPBL-203ENST00000503274 LBRQ14739 615 aaKnown RBP10.84□□□□□ -0.67
NIPBL-203ENST00000503274 EFHC2Q5JST6 749 aa10.84□□□□□ -0.67
NIPBL-203ENST00000503274 PHLDB3Q6NSJ2 640 aa10.84□□□□□ -0.67
NIPBL-203ENST00000503274 NANOS1Q8WY41 292 aaKnown RBP10.84□□□□□ -0.67
NIPBL-203ENST00000503274 NUCKS1Q9H1E3 243 aaKnown RBP10.84□□□□□ -0.67
NIPBL-203ENST00000503274 GPC6Q9Y625 555 aaPredicted RBP10.84□□□□□ -0.67
NIPBL-203ENST00000503274 A0A1W2PNR3 127 aa10.83□□□□□ -0.68
NIPBL-203ENST00000503274 CDC14CA4D256 554 aa10.83□□□□□ -0.68
NIPBL-203ENST00000503274 RTN1Q16799 776 aa10.83□□□□□ -0.68
NIPBL-203ENST00000503274 CAPN12Q6ZSI9 719 aa10.83□□□□□ -0.68
NIPBL-203ENST00000503274 VWA5B2Q8N398 1253 aa10.83□□□□□ -0.68
NIPBL-203ENST00000503274 QTRT2Q9H974 415 aaKnown RBP10.83□□□□□ -0.68
NIPBL-203ENST00000503274 GMPRP36959 345 aa10.82□□□□□ -0.68
NIPBL-203ENST00000503274 SV2AQ7L0J3 742 aa10.82□□□□□ -0.68
NIPBL-203ENST00000503274 NLRP8Q86W28 1048 aa10.82□□□□□ -0.68
NIPBL-203ENST00000503274 ZNF837Q96EG3 531 aaPredicted RBP10.82□□□□□ -0.68
NIPBL-203ENST00000503274 TRAIPQ9BWF2 469 aa10.82□□□□□ -0.68
NIPBL-203ENST00000503274 NEUROD4Q9HD90 331 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms