RNA–Protein interactions for RNA: ENST00000503180.5

DDR1-248, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-248ENST00000503180 MIER1Q8N108 512 aa20.61■□□□□ 0.89
DDR1-248ENST00000503180 UBR2Q8IWV8 1755 aa20.6■□□□□ 0.89
DDR1-248ENST00000503180 GNAI1P63096 354 aa20.6■□□□□ 0.89
DDR1-248ENST00000503180 ARHGEF1Q92888 912 aaKnown RBP20.6■□□□□ 0.89
DDR1-248ENST00000503180 PPP1R1BQ9UD71 204 aaPredicted RBP20.6■□□□□ 0.89
DDR1-248ENST00000503180 USP16Q9Y5T5 823 aa20.6■□□□□ 0.89
DDR1-248ENST00000503180 QSER1Q2KHR3 1735 aa20.59■□□□□ 0.89
DDR1-248ENST00000503180 GIGYF1O75420 1035 aaPredicted RBP20.59■□□□□ 0.89
DDR1-248ENST00000503180 CANXP27824 592 aaKnown RBP20.59■□□□□ 0.89
DDR1-248ENST00000503180 POLD1P28340 1107 aa20.59■□□□□ 0.89
DDR1-248ENST00000503180 SMIM5Q71RC9 77 aa20.59■□□□□ 0.89
DDR1-248ENST00000503180 AMIGO3Q86WK7 504 aa20.59■□□□□ 0.89
DDR1-248ENST00000503180 WWC1Q8IX03 1113 aa20.58■□□□□ 0.89
DDR1-248ENST00000503180 IFT57Q9NWB7 429 aa20.58■□□□□ 0.89
DDR1-248ENST00000503180 CICQ96RK0 1608 aaPredicted RBP20.57■□□□□ 0.88
DDR1-248ENST00000503180 CASZ1Q86V15 1759 aa20.57■□□□□ 0.88
DDR1-248ENST00000503180 A0A087WZG4 1122 aa20.57■□□□□ 0.88
DDR1-248ENST00000503180 COL5A3P25940 1745 aaPredicted RBP20.57■□□□□ 0.88
DDR1-248ENST00000503180 ZBTB1Q9Y2K1 713 aa20.57■□□□□ 0.88
DDR1-248ENST00000503180 SALL2Q9Y467 1007 aaPredicted RBP20.57■□□□□ 0.88
DDR1-248ENST00000503180 TJP1Q07157 1748 aa20.56■□□□□ 0.88
DDR1-248ENST00000503180 SENP3-EIF4A1A0A087X0R7 540 aa20.56■□□□□ 0.88
DDR1-248ENST00000503180 ZPR1O75312 459 aa20.56■□□□□ 0.88
DDR1-248ENST00000503180 A1BGP04217 495 aa20.56■□□□□ 0.88
DDR1-248ENST00000503180 IL6STP40189 918 aaPredicted RBP20.56■□□□□ 0.88
DDR1-248ENST00000503180 NLGN1Q8N2Q7 840 aa20.56■□□□□ 0.88
DDR1-248ENST00000503180 PRAMEF22A3QJZ6 481 aa20.55■□□□□ 0.88
DDR1-248ENST00000503180 ZNF853P0CG23 659 aa20.55■□□□□ 0.88
DDR1-248ENST00000503180 PTGER2P43116 358 aa20.55■□□□□ 0.88
DDR1-248ENST00000503180 UBR3Q6ZT12 1888 aa20.55■□□□□ 0.88
DDR1-248ENST00000503180 SOS1Q07889 1333 aaPredicted RBP20.54■□□□□ 0.88
DDR1-248ENST00000503180 MYH14Q7Z406 1995 aaKnown RBP20.54■□□□□ 0.88
DDR1-248ENST00000503180 EIF5P55010 431 aaKnown RBP20.54■□□□□ 0.88
DDR1-248ENST00000503180 WDR63Q8IWG1 891 aa20.54■□□□□ 0.88
DDR1-248ENST00000503180 ZNF330Q9Y3S2 320 aaPredicted RBP20.54■□□□□ 0.88
DDR1-248ENST00000503180 TUBGCP6Q96RT7 1819 aa20.53■□□□□ 0.88
DDR1-248ENST00000503180 MSL1Q68DK7 614 aa20.53■□□□□ 0.88
DDR1-248ENST00000503180 ARXQ96QS3 562 aa20.53■□□□□ 0.88
DDR1-248ENST00000503180 MBIPQ9NS73 344 aa20.53■□□□□ 0.88
DDR1-248ENST00000503180 IL16Q14005 1332 aa20.53■□□□□ 0.88
DDR1-248ENST00000503180 SGIP1Q9BQI5 828 aa20.52■□□□□ 0.88
DDR1-248ENST00000503180 CHMP4AQ9BY43 222 aa20.52■□□□□ 0.88
DDR1-248ENST00000503180 NARFQ9UHQ1 456 aa20.52■□□□□ 0.88
DDR1-248ENST00000503180 KDM3BQ7LBC6 1761 aa20.51■□□□□ 0.87
DDR1-248ENST00000503180 COL15A1P39059 1388 aa20.51■□□□□ 0.87
DDR1-248ENST00000503180 LRP5O75197 1615 aa20.51■□□□□ 0.87
DDR1-248ENST00000503180 GYS1P13807 737 aa20.5■□□□□ 0.87
DDR1-248ENST00000503180 EIF2S2P20042 333 aaKnown RBP20.5■□□□□ 0.87
DDR1-248ENST00000503180 USP42Q9H9J4 1324 aaKnown RBP20.5■□□□□ 0.87
DDR1-248ENST00000503180 HOXB7P09629 217 aa20.49■□□□□ 0.87
DDR1-248ENST00000503180 ERBB4Q15303 1308 aa20.49■□□□□ 0.87
DDR1-248ENST00000503180 USPL1Q5W0Q7 1092 aa20.48■□□□□ 0.87
DDR1-248ENST00000503180 SRP68Q9UHB9 627 aaKnown RBP20.48■□□□□ 0.87
DDR1-248ENST00000503180 TBC1D2BQ9UPU7 963 aa20.48■□□□□ 0.87
DDR1-248ENST00000503180 NBPF26B4DH59 902 aa20.47■□□□□ 0.87
DDR1-248ENST00000503180 PIP4K2AP48426 406 aaPredicted RBP20.47■□□□□ 0.87
DDR1-248ENST00000503180 DUSP27Q5VZP5 1158 aa20.47■□□□□ 0.87
DDR1-248ENST00000503180 NBPF10Q6P3W6 841 aaKnown RBP20.47■□□□□ 0.87
DDR1-248ENST00000503180 NBPF15Q8N660 670 aa20.47■□□□□ 0.87
DDR1-248ENST00000503180 MMP10P09238 476 aa20.46■□□□□ 0.87
DDR1-248ENST00000503180 DZIP3Q86Y13 1208 aaKnown RBP20.46■□□□□ 0.87
DDR1-248ENST00000503180 MYL6BP14649 208 aa20.45■□□□□ 0.86
DDR1-248ENST00000503180 FKBP8Q14318 412 aa20.45■□□□□ 0.86
DDR1-248ENST00000503180 KRT24Q2M2I5 525 aa20.45■□□□□ 0.86
DDR1-248ENST00000503180 HDGFL1Q5TGJ6 251 aa20.45■□□□□ 0.86
DDR1-248ENST00000503180 MYH16Q9H6N6 1097 aa20.45■□□□□ 0.86
DDR1-248ENST00000503180 PARP3Q9Y6F1 533 aa20.45■□□□□ 0.86
DDR1-248ENST00000503180 ELL2O00472 640 aaPredicted RBP20.44■□□□□ 0.86
DDR1-248ENST00000503180 GOLGA2Q08379 1002 aa20.44■□□□□ 0.86
DDR1-248ENST00000503180 NECTIN2Q92692 538 aa20.44■□□□□ 0.86
DDR1-248ENST00000503180 TSR2Q969E8 191 aaKnown RBP20.44■□□□□ 0.86
DDR1-248ENST00000503180 CLEC4GQ6UXB4 293 aa20.43■□□□□ 0.86
DDR1-248ENST00000503180 FHDC1Q9C0D6 1143 aaPredicted RBP20.43■□□□□ 0.86
DDR1-248ENST00000503180 ZNF652Q9Y2D9 606 aa20.43■□□□□ 0.86
DDR1-248ENST00000503180 TM4SF1P30408 202 aa20.42■□□□□ 0.86
DDR1-248ENST00000503180 KIF6Q6ZMV9 814 aa20.42■□□□□ 0.86
DDR1-248ENST00000503180 KLHL34Q8N239 644 aa20.42■□□□□ 0.86
DDR1-248ENST00000503180 C8orf58Q8NAV2 365 aa20.42■□□□□ 0.86
DDR1-248ENST00000503180 DDX21Q9NR30 783 aaKnown RBP eCLIP20.42■□□□□ 0.86
DDR1-248ENST00000503180 DBF4Q9UBU7 674 aaPredicted RBP20.42■□□□□ 0.86
DDR1-248ENST00000503180 RGL2O15211 777 aa20.41■□□□□ 0.86
DDR1-248ENST00000503180 SYT17Q9BSW7 474 aa20.41■□□□□ 0.86
DDR1-248ENST00000503180 CAMTA2O94983 1202 aa20.4■□□□□ 0.86
DDR1-248ENST00000503180 PDIA6Q15084 440 aa20.4■□□□□ 0.86
DDR1-248ENST00000503180 COL24A1Q17RW2 1714 aa20.4■□□□□ 0.86
DDR1-248ENST00000503180 BCL2L12Q9HB09 334 aa20.4■□□□□ 0.86
DDR1-248ENST00000503180 CD2APQ9Y5K6 639 aa20.4■□□□□ 0.86
DDR1-248ENST00000503180 LAMB4A4D0S4 1761 aa20.39■□□□□ 0.86
DDR1-248ENST00000503180 ERVV-1B6SEH8 477 aa20.39■□□□□ 0.85
DDR1-248ENST00000503180 CCDC30Q5VVM6 783 aa20.39■□□□□ 0.85
DDR1-248ENST00000503180 SETDB2Q96T68 719 aa20.39■□□□□ 0.85
DDR1-248ENST00000503180 HYPKQ9NX55 129 aa20.39■□□□□ 0.85
DDR1-248ENST00000503180 C4AP0C0L4 1744 aa20.39■□□□□ 0.85
DDR1-248ENST00000503180 ZNF521Q96K83 1311 aa20.38■□□□□ 0.85
DDR1-248ENST00000503180 FANCIQ9NVI1 1328 aa20.38■□□□□ 0.85
DDR1-248ENST00000503180 DCAF8L1A6NGE4 600 aa20.38■□□□□ 0.85
DDR1-248ENST00000503180 NFIXQ14938 502 aa20.38■□□□□ 0.85
DDR1-248ENST00000503180 TWISTNBQ3B726 338 aaPredicted RBP20.38■□□□□ 0.85
DDR1-248ENST00000503180 BICDL1Q6ZP65 573 aa20.38■□□□□ 0.85
DDR1-248ENST00000503180 CHPF2Q9P2E5 772 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms