RNA–Protein interactions for RNA: ENST00000503121.5

SYNE4-206, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-206ENST00000503121 SOS1Q07889 1333 aaPredicted RBP15.88■□□□□ 0.13
SYNE4-206ENST00000503121 MIS18AQ9NYP9 233 aa15.87■□□□□ 0.13
SYNE4-206ENST00000503121 PARP3Q9Y6F1 533 aa15.87■□□□□ 0.13
SYNE4-206ENST00000503121 USP42Q9H9J4 1324 aaKnown RBP15.87■□□□□ 0.13
SYNE4-206ENST00000503121 CICQ96RK0 1608 aaPredicted RBP15.86■□□□□ 0.13
SYNE4-206ENST00000503121 YY1P25490 414 aa15.86■□□□□ 0.13
SYNE4-206ENST00000503121 RIPK4P57078 832 aa15.86■□□□□ 0.13
SYNE4-206ENST00000503121 FKBP8Q14318 412 aa15.86■□□□□ 0.13
SYNE4-206ENST00000503121 USPL1Q5W0Q7 1092 aa15.86■□□□□ 0.13
SYNE4-206ENST00000503121 NPM2Q86SE8 214 aaKnown RBP15.86■□□□□ 0.13
SYNE4-206ENST00000503121 CCDC146Q8IYE0 955 aa15.86■□□□□ 0.13
SYNE4-206ENST00000503121 THUMPD2Q9BTF0 503 aaKnown RBP15.86■□□□□ 0.13
SYNE4-206ENST00000503121 ZNF330Q9Y3S2 320 aaPredicted RBP15.86■□□□□ 0.13
SYNE4-206ENST00000503121 SIPA1L3O60292 1781 aaPredicted RBP15.85■□□□□ 0.13
SYNE4-206ENST00000503121 UBR2Q8IWV8 1755 aa15.85■□□□□ 0.13
SYNE4-206ENST00000503121 A1BGP04217 495 aa15.85■□□□□ 0.13
SYNE4-206ENST00000503121 SNRPA1P09661 255 aaKnown RBP15.85■□□□□ 0.13
SYNE4-206ENST00000503121 PNISRQ8TF01 805 aaKnown RBP15.85■□□□□ 0.13
SYNE4-206ENST00000503121 COL15A1P39059 1388 aa15.85■□□□□ 0.13
SYNE4-206ENST00000503121 A0A087WZG4 1122 aa15.84■□□□□ 0.13
SYNE4-206ENST00000503121 EIF5P55010 431 aaKnown RBP15.84■□□□□ 0.13
SYNE4-206ENST00000503121 NARFQ9UHQ1 456 aa15.84■□□□□ 0.13
SYNE4-206ENST00000503121 ADAMTS8Q9UP79 889 aa15.84■□□□□ 0.13
SYNE4-206ENST00000503121 USP16Q9Y5T5 823 aa15.84■□□□□ 0.13
SYNE4-206ENST00000503121 UTRNP46939 3433 aa15.84■□□□□ 0.13
SYNE4-206ENST00000503121 TMPOP42166 694 aaKnown RBP15.83■□□□□ 0.12
SYNE4-206ENST00000503121 NEUROD2Q15784 382 aa15.83■□□□□ 0.12
SYNE4-206ENST00000503121 RRP7AQ9Y3A4 280 aaKnown RBP15.83■□□□□ 0.12
SYNE4-206ENST00000503121 PRAMEF22A3QJZ6 481 aa15.82■□□□□ 0.12
SYNE4-206ENST00000503121 IL6STP40189 918 aaPredicted RBP15.82■□□□□ 0.12
SYNE4-206ENST00000503121 LMOD3Q0VAK6 560 aa15.82■□□□□ 0.12
SYNE4-206ENST00000503121 RUNDC1Q96C34 613 aa15.82■□□□□ 0.12
SYNE4-206ENST00000503121 WWC3Q9ULE0 1092 aa15.82■□□□□ 0.12
SYNE4-206ENST00000503121 C4AP0C0L4 1744 aa15.82■□□□□ 0.12
SYNE4-206ENST00000503121 GRIN3BO60391 1043 aa15.81■□□□□ 0.12
SYNE4-206ENST00000503121 TBC1D2BQ9UPU7 963 aa15.81■□□□□ 0.12
SYNE4-206ENST00000503121 DLG5Q8TDM6 1919 aa15.8■□□□□ 0.12
SYNE4-206ENST00000503121 YBX3P16989 372 aaKnown RBP eCLIP15.8■□□□□ 0.12
SYNE4-206ENST00000503121 TM4SF1P30408 202 aa15.8■□□□□ 0.12
SYNE4-206ENST00000503121 PIP4K2AP48426 406 aaPredicted RBP15.8■□□□□ 0.12
SYNE4-206ENST00000503121 DDR1Q08345 913 aa15.8■□□□□ 0.12
SYNE4-206ENST00000503121 TGFB2P61812 414 aa15.79■□□□□ 0.12
SYNE4-206ENST00000503121 NFIXQ14938 502 aa15.79■□□□□ 0.12
SYNE4-206ENST00000503121 BCL2L12Q9HB09 334 aa15.79■□□□□ 0.12
SYNE4-206ENST00000503121 TSPYL4Q9UJ04 414 aa15.79■□□□□ 0.12
SYNE4-206ENST00000503121 A0A0G2JLW4 131 aa15.78■□□□□ 0.12
SYNE4-206ENST00000503121 POLRMTO00411 1230 aaKnown RBP15.78■□□□□ 0.12
SYNE4-206ENST00000503121 ANP32CO43423 234 aa15.78■□□□□ 0.12
SYNE4-206ENST00000503121 EIF4A1P60842 406 aaKnown RBP15.78■□□□□ 0.12
SYNE4-206ENST00000503121 BICDL1Q6ZP65 573 aa15.78■□□□□ 0.12
SYNE4-206ENST00000503121 GOLGB1Q14789 3259 aaKnown RBP15.78■□□□□ 0.12
SYNE4-206ENST00000503121 GIGYF1O75420 1035 aaPredicted RBP15.77■□□□□ 0.12
SYNE4-206ENST00000503121 DZIP3Q86Y13 1208 aaKnown RBP15.77■□□□□ 0.12
SYNE4-206ENST00000503121 C10orf71Q711Q0 1435 aa15.77■□□□□ 0.11
SYNE4-206ENST00000503121 DPEP1P16444 411 aa15.76■□□□□ 0.11
SYNE4-206ENST00000503121 LAS1LQ9Y4W2 734 aaKnown RBP15.76■□□□□ 0.11
SYNE4-206ENST00000503121 SERPINB2P05120 415 aa15.75■□□□□ 0.11
SYNE4-206ENST00000503121 BABAM1Q9NWV8 329 aa15.75■□□□□ 0.11
SYNE4-206ENST00000503121 PXDNLA1KZ92 1463 aa15.74■□□□□ 0.11
SYNE4-206ENST00000503121 NBPF26B4DH59 902 aa15.74■□□□□ 0.11
SYNE4-206ENST00000503121 APAF1O14727 1248 aa15.74■□□□□ 0.11
SYNE4-206ENST00000503121 CAMTA2O94983 1202 aa15.74■□□□□ 0.11
SYNE4-206ENST00000503121 CCDC184Q52MB2 194 aa15.74■□□□□ 0.11
SYNE4-206ENST00000503121 TBC1D9BQ66K14 1250 aa15.74■□□□□ 0.11
SYNE4-206ENST00000503121 NBPF10Q6P3W6 841 aaKnown RBP15.74■□□□□ 0.11
SYNE4-206ENST00000503121 NBPF15Q8N660 670 aa15.74■□□□□ 0.11
SYNE4-206ENST00000503121 TRIM35Q9UPQ4 493 aa15.74■□□□□ 0.11
SYNE4-206ENST00000503121 BCS1LQ9Y276 419 aa15.74■□□□□ 0.11
SYNE4-206ENST00000503121 NGEFQ8N5V2 710 aa15.73■□□□□ 0.11
SYNE4-206ENST00000503121 SETDB2Q96T68 719 aa15.73■□□□□ 0.11
SYNE4-206ENST00000503121 MRS2Q9HD23 443 aa15.72■□□□□ 0.11
SYNE4-206ENST00000503121 PIM2Q9P1W9 311 aa15.72■□□□□ 0.11
SYNE4-206ENST00000503121 ZNF652Q9Y2D9 606 aa15.72■□□□□ 0.11
SYNE4-206ENST00000503121 KDM3BQ7LBC6 1761 aa15.72■□□□□ 0.11
SYNE4-206ENST00000503121 CHD4Q14839 1912 aa15.71■□□□□ 0.11
SYNE4-206ENST00000503121 NPHP1O15259 732 aa15.71■□□□□ 0.11
SYNE4-206ENST00000503121 MYL6BP14649 208 aa15.71■□□□□ 0.11
SYNE4-206ENST00000503121 EIF2S2P20042 333 aaKnown RBP15.71■□□□□ 0.11
SYNE4-206ENST00000503121 CHRNA5P30532 468 aa15.71■□□□□ 0.11
SYNE4-206ENST00000503121 KIF13BQ9NQT8 1826 aa15.71■□□□□ 0.1
SYNE4-206ENST00000503121 CHL1O00533 1208 aa15.7■□□□□ 0.1
SYNE4-206ENST00000503121 KCNA3P22001 575 aa15.7■□□□□ 0.1
SYNE4-206ENST00000503121 CLEC4GQ6UXB4 293 aa15.7■□□□□ 0.1
SYNE4-206ENST00000503121 CARMIL3Q8ND23 1372 aa15.7■□□□□ 0.1
SYNE4-206ENST00000503121 N4BP2Q86UW6 1770 aaPredicted RBP15.7■□□□□ 0.1
SYNE4-206ENST00000503121 DALRD3Q5D0E6 543 aaKnown RBP15.69■□□□□ 0.1
SYNE4-206ENST00000503121 ZNF784Q8NCA9 323 aaPredicted RBP15.69■□□□□ 0.1
SYNE4-206ENST00000503121 KIF6Q6ZMV9 814 aa15.68■□□□□ 0.1
SYNE4-206ENST00000503121 CCDC24Q8N4L8 307 aa15.68■□□□□ 0.1
SYNE4-206ENST00000503121 CNBD1Q8NA66 436 aa15.68■□□□□ 0.1
SYNE4-206ENST00000503121 NIP7Q9Y221 180 aaKnown RBP eCLIP15.68■□□□□ 0.1
SYNE4-206ENST00000503121 H0YIN7 160 aa15.67■□□□□ 0.1
SYNE4-206ENST00000503121 CALD1Q05682 793 aaKnown RBP15.67■□□□□ 0.1
SYNE4-206ENST00000503121 HLFQ16534 295 aa15.67■□□□□ 0.1
SYNE4-206ENST00000503121 PRR5LQ6MZQ0 368 aa15.67■□□□□ 0.1
SYNE4-206ENST00000503121 ARHGAP27Q6ZUM4 889 aa15.67■□□□□ 0.1
SYNE4-206ENST00000503121 C2CD5Q86YS7 1000 aa15.67■□□□□ 0.1
SYNE4-206ENST00000503121 NECTIN2Q92692 538 aa15.67■□□□□ 0.1
SYNE4-206ENST00000503121 CFAP44Q96MT7 982 aa15.67■□□□□ 0.1
SYNE4-206ENST00000503121 ERBB4Q15303 1308 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms