RNA–Protein interactions for RNA: ENST00000502575.1

PDE4D-209, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-209ENST00000502575 MTRQ99707 1265 aa12.48□□□□□ -0.41
PDE4D-209ENST00000502575 CABP1Q9NZU7 370 aa12.48□□□□□ -0.41
PDE4D-209ENST00000502575 RGPD2P0DJD1 1756 aa12.48□□□□□ -0.41
PDE4D-209ENST00000502575 NUP188Q5SRE5 1749 aa12.48□□□□□ -0.41
PDE4D-209ENST00000502575 PEAK1Q9H792 1746 aa12.48□□□□□ -0.41
PDE4D-209ENST00000502575 APLP1P51693 650 aa12.47□□□□□ -0.41
PDE4D-209ENST00000502575 FAM182BQ5T319 152 aa12.47□□□□□ -0.41
PDE4D-209ENST00000502575 KRT27Q7Z3Y8 459 aa12.47□□□□□ -0.41
PDE4D-209ENST00000502575 STRN4Q9NRL3 753 aa12.47□□□□□ -0.41
PDE4D-209ENST00000502575 COL5A2P05997 1499 aaPredicted RBP12.46□□□□□ -0.41
PDE4D-209ENST00000502575 RCCD1A6NED2 376 aa12.46□□□□□ -0.41
PDE4D-209ENST00000502575 TULP1O00294 542 aaPredicted RBP12.46□□□□□ -0.41
PDE4D-209ENST00000502575 GNPATO15228 680 aa12.46□□□□□ -0.41
PDE4D-209ENST00000502575 DEFB132Q7Z7B7 95 aa12.46□□□□□ -0.41
PDE4D-209ENST00000502575 NFAT5O94916 1531 aa12.46□□□□□ -0.42
PDE4D-209ENST00000502575 CPDO75976 1380 aa12.45□□□□□ -0.42
PDE4D-209ENST00000502575 SPATA31A1Q5TZJ5 1347 aa12.45□□□□□ -0.42
PDE4D-209ENST00000502575 EVC2Q86UK5 1308 aa12.45□□□□□ -0.42
PDE4D-209ENST00000502575 RBM26Q5T8P6 1007 aaKnown RBP12.45□□□□□ -0.42
PDE4D-209ENST00000502575 CD163L1Q9NR16 1453 aa12.45□□□□□ -0.42
PDE4D-209ENST00000502575 TONSLQ96HA7 1378 aa12.44□□□□□ -0.42
PDE4D-209ENST00000502575 KIF20BQ96Q89 1820 aa12.44□□□□□ -0.42
PDE4D-209ENST00000502575 CCDC125Q86Z20 511 aa12.44□□□□□ -0.42
PDE4D-209ENST00000502575 PXYLP1Q8TE99 480 aa12.44□□□□□ -0.42
PDE4D-209ENST00000502575 CPSF1Q10570 1443 aaKnown RBP12.44□□□□□ -0.42
PDE4D-209ENST00000502575 USP35Q9P2H5 1018 aa12.43□□□□□ -0.42
PDE4D-209ENST00000502575 BRD4O60885 1362 aaPredicted RBP12.43□□□□□ -0.42
PDE4D-209ENST00000502575 SBNO2Q9Y2G9 1366 aa12.43□□□□□ -0.42
PDE4D-209ENST00000502575 MYOM1P52179 1685 aa12.42□□□□□ -0.42
PDE4D-209ENST00000502575 LRP5O75197 1615 aa12.42□□□□□ -0.42
PDE4D-209ENST00000502575 ZBTB7CA1YPR0 619 aa12.42□□□□□ -0.42
PDE4D-209ENST00000502575 GCP02774 474 aa12.42□□□□□ -0.42
PDE4D-209ENST00000502575 KMT5BQ4FZB7 885 aa12.42□□□□□ -0.42
PDE4D-209ENST00000502575 LARP1Q6PKG0 1096 aaKnown RBP12.42□□□□□ -0.42
PDE4D-209ENST00000502575 NLRP13Q86W25 1043 aa12.42□□□□□ -0.42
PDE4D-209ENST00000502575 RGPD3A6NKT7 1758 aaPredicted RBP12.41□□□□□ -0.42
PDE4D-209ENST00000502575 RGPD4Q7Z3J3 1758 aa12.41□□□□□ -0.42
PDE4D-209ENST00000502575 CARD11Q9BXL7 1154 aa12.41□□□□□ -0.42
PDE4D-209ENST00000502575 TTC21BQ7Z4L5 1316 aa12.4□□□□□ -0.42
PDE4D-209ENST00000502575 TRIM26Q12899 539 aaPredicted RBP12.4□□□□□ -0.42
PDE4D-209ENST00000502575 METTL3Q86U44 580 aaKnown RBP12.4□□□□□ -0.42
PDE4D-209ENST00000502575 KTN1Q86UP2 1357 aaKnown RBP12.4□□□□□ -0.42
PDE4D-209ENST00000502575 FAM208AQ9UK61 1670 aaKnown RBP12.39□□□□□ -0.43
PDE4D-209ENST00000502575 CRB1P82279 1406 aa12.39□□□□□ -0.43
PDE4D-209ENST00000502575 GPR37O15354 613 aa12.39□□□□□ -0.43
PDE4D-209ENST00000502575 GPIHBP1Q8IV16 184 aa12.39□□□□□ -0.43
PDE4D-209ENST00000502575 PCDHB3Q9Y5E6 796 aa12.39□□□□□ -0.43
PDE4D-209ENST00000502575 SHANK3Q9BYB0 1731 aa12.38□□□□□ -0.43
PDE4D-209ENST00000502575 GGCXP38435 758 aa12.38□□□□□ -0.43
PDE4D-209ENST00000502575 EVA1CP58658 441 aa12.38□□□□□ -0.43
PDE4D-209ENST00000502575 SF3B2Q13435 895 aaKnown RBP12.38□□□□□ -0.43
PDE4D-209ENST00000502575 IRX2Q9BZI1 471 aaPredicted RBP12.38□□□□□ -0.43
PDE4D-209ENST00000502575 AATKQ6ZMQ8 1374 aa12.38□□□□□ -0.43
PDE4D-209ENST00000502575 ABCC6O95255 1503 aa12.37□□□□□ -0.43
PDE4D-209ENST00000502575 ACTN4O43707 911 aaKnown RBP12.37□□□□□ -0.43
PDE4D-209ENST00000502575 DISP2A7MBM2 1401 aa12.37□□□□□ -0.43
PDE4D-209ENST00000502575 A0A1W2PP64 1363 aa12.36□□□□□ -0.43
PDE4D-209ENST00000502575 BARGINQ6ZT62 677 aa12.36□□□□□ -0.43
PDE4D-209ENST00000502575 BTAF1O14981 1849 aa12.36□□□□□ -0.43
PDE4D-209ENST00000502575 TTC21AQ8NDW8 1320 aa12.36□□□□□ -0.43
PDE4D-209ENST00000502575 TRIM37O94972 964 aa12.35□□□□□ -0.43
PDE4D-209ENST00000502575 BAG6P46379 1132 aa12.35□□□□□ -0.43
PDE4D-209ENST00000502575 FAM161AQ3B820 660 aa12.35□□□□□ -0.43
PDE4D-209ENST00000502575 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.35□□□□□ -0.432e-6■■□□□ 12.3
PDE4D-209ENST00000502575 TCP11L2Q8N4U5 519 aa12.35□□□□□ -0.43
PDE4D-209ENST00000502575 TMUB1Q9BVT8 246 aa12.35□□□□□ -0.43
PDE4D-209ENST00000502575 NHSQ6T4R5 1651 aa12.35□□□□□ -0.43
PDE4D-209ENST00000502575 ZPR1O75312 459 aa12.34□□□□□ -0.43
PDE4D-209ENST00000502575 ARHGEF25Q86VW2 580 aa12.34□□□□□ -0.43
PDE4D-209ENST00000502575 NME9Q86XW9 330 aa12.34□□□□□ -0.43
PDE4D-209ENST00000502575 SLC12A5Q9H2X9 1139 aa12.34□□□□□ -0.43
PDE4D-209ENST00000502575 OVOS2A0A0J9YW53 1432 aa12.34□□□□□ -0.43
PDE4D-209ENST00000502575 OVOS2Q6IE36 1432 aa12.34□□□□□ -0.43
PDE4D-209ENST00000502575 MAP2P11137 1827 aaKnown RBP12.34□□□□□ -0.43
PDE4D-209ENST00000502575 CFHP08603 1231 aa12.33□□□□□ -0.44
PDE4D-209ENST00000502575 COPS2P61201 443 aa12.33□□□□□ -0.44
PDE4D-209ENST00000502575 EZH2Q15910 746 aaKnown RBP12.33□□□□□ -0.44
PDE4D-209ENST00000502575 TMC1Q8TDI8 760 aa12.33□□□□□ -0.44
PDE4D-209ENST00000502575 ZNF516Q92618 1163 aa12.33□□□□□ -0.44
PDE4D-209ENST00000502575 TESK2Q96S53 571 aa12.33□□□□□ -0.44
PDE4D-209ENST00000502575 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.33□□□□□ -0.44
PDE4D-209ENST00000502575 EDC4Q6P2E9 1401 aaKnown RBP12.33□□□□□ -0.44
PDE4D-209ENST00000502575 WDR17Q8IZU2 1322 aa12.33□□□□□ -0.44
PDE4D-209ENST00000502575 USP31Q70CQ4 1352 aa12.32□□□□□ -0.44
PDE4D-209ENST00000502575 ST20-MTHFSA0A0A6YYL1 179 aa12.32□□□□□ -0.44
PDE4D-209ENST00000502575 DAXXQ9UER7 740 aaPredicted RBP12.32□□□□□ -0.44
PDE4D-209ENST00000502575 DOT1LQ8TEK3 1739 aa12.31□□□□□ -0.44
PDE4D-209ENST00000502575 ANKRD26Q9UPS8 1709 aa12.31□□□□□ -0.44
PDE4D-209ENST00000502575 CASZ1Q86V15 1759 aa12.31□□□□□ -0.44
PDE4D-209ENST00000502575 OVOS2A0A0G2JMS6 1433 aa12.31□□□□□ -0.44
PDE4D-209ENST00000502575 PDE3BQ13370 1112 aa12.31□□□□□ -0.44
PDE4D-209ENST00000502575 PPP1R18Q6NYC8 613 aa12.31□□□□□ -0.44
PDE4D-209ENST00000502575 FAM196AQ6ZSG2 479 aa12.31□□□□□ -0.44
PDE4D-209ENST00000502575 TOM1L2Q6ZVM7 507 aa12.31□□□□□ -0.44
PDE4D-209ENST00000502575 THRAP3Q9Y2W1 955 aaKnown RBP12.31□□□□□ -0.44
PDE4D-209ENST00000502575 TUBGCP6Q96RT7 1819 aa12.31□□□□□ -0.44
PDE4D-209ENST00000502575 USP47Q96K76 1375 aa12.3□□□□□ -0.44
PDE4D-209ENST00000502575 KCNH5Q8NCM2 988 aa12.3□□□□□ -0.44
PDE4D-209ENST00000502575 V9GY48 417 aaPredicted RBP12.3□□□□□ -0.44
PDE4D-209ENST00000502575 SLC10A3P09131 477 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms