RNA–Protein interactions for RNA: ENST00000502501.1

PROM1-202, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-202ENST00000502501 SYT17Q9BSW7 474 aa33.79■■■■□ 3
PROM1-202ENST00000502501 LAMB4A4D0S4 1761 aa33.78■■■■□ 3
PROM1-202ENST00000502501 KCNQ3O43525 872 aa33.78■■■■□ 3
PROM1-202ENST00000502501 MSL1Q68DK7 614 aa33.78■■■■□ 3
PROM1-202ENST00000502501 CCDC146Q8IYE0 955 aa33.78■■■■□ 3
PROM1-202ENST00000502501 ZBTB1Q9Y2K1 713 aa33.78■■■■□ 3
PROM1-202ENST00000502501 USP42Q9H9J4 1324 aaKnown RBP33.78■■■■□ 3
PROM1-202ENST00000502501 COL15A1P39059 1388 aa33.76■■■■□ 3
PROM1-202ENST00000502501 SNRPA1P09661 255 aaKnown RBP33.76■■■□□ 2.99
PROM1-202ENST00000502501 GYS1P13807 737 aa33.75■■■□□ 2.99
PROM1-202ENST00000502501 THUMPD2Q9BTF0 503 aaKnown RBP33.74■■■□□ 2.99
PROM1-202ENST00000502501 EIF5P55010 431 aaKnown RBP33.73■■■□□ 2.99
PROM1-202ENST00000502501 IL6STP40189 918 aaPredicted RBP33.72■■■□□ 2.99
PROM1-202ENST00000502501 CCDC184Q52MB2 194 aa33.71■■■□□ 2.99
PROM1-202ENST00000502501 TRIM35Q9UPQ4 493 aa33.71■■■□□ 2.99
PROM1-202ENST00000502501 CD2APQ9Y5K6 639 aa33.71■■■□□ 2.99
PROM1-202ENST00000502501 UTRNP46939 3433 aa33.71■■■□□ 2.99
PROM1-202ENST00000502501 GOLGB1Q14789 3259 aaKnown RBP33.71■■■□□ 2.99
PROM1-202ENST00000502501 NARFQ9UHQ1 456 aa33.7■■■□□ 2.99
PROM1-202ENST00000502501 SCN7AQ01118 1682 aa33.69■■■□□ 2.98
PROM1-202ENST00000502501 A0A087WZG4 1122 aa33.69■■■□□ 2.98
PROM1-202ENST00000502501 KIF13BQ9NQT8 1826 aa33.68■■■□□ 2.98
PROM1-202ENST00000502501 EIF4A1P60842 406 aaKnown RBP33.68■■■□□ 2.98
PROM1-202ENST00000502501 MRS2Q9HD23 443 aa33.68■■■□□ 2.98
PROM1-202ENST00000502501 RRP7AQ9Y3A4 280 aaKnown RBP33.68■■■□□ 2.98
PROM1-202ENST00000502501 MMP10P09238 476 aa33.67■■■□□ 2.98
PROM1-202ENST00000502501 MIS18AQ9NYP9 233 aa33.67■■■□□ 2.98
PROM1-202ENST00000502501 ZPR1O75312 459 aa33.66■■■□□ 2.98
PROM1-202ENST00000502501 USP16Q9Y5T5 823 aa33.66■■■□□ 2.98
PROM1-202ENST00000502501 CANXP27824 592 aaKnown RBP33.65■■■□□ 2.98
PROM1-202ENST00000502501 GIGYF1O75420 1035 aaPredicted RBP33.64■■■□□ 2.98
PROM1-202ENST00000502501 NCBP3Q53F19 620 aaKnown RBP33.64■■■□□ 2.98
PROM1-202ENST00000502501 SRP68Q9UHB9 627 aaKnown RBP33.64■■■□□ 2.98
PROM1-202ENST00000502501 TSPYL4Q9UJ04 414 aa33.64■■■□□ 2.98
PROM1-202ENST00000502501 NEUROD2Q15784 382 aa33.63■■■□□ 2.97
PROM1-202ENST00000502501 APAF1O14727 1248 aa33.62■■■□□ 2.97
PROM1-202ENST00000502501 BCORQ6W2J9 1755 aa33.62■■■□□ 2.97
PROM1-202ENST00000502501 C10orf71Q711Q0 1435 aa33.62■■■□□ 2.97
PROM1-202ENST00000502501 PRAMEF22A3QJZ6 481 aa33.61■■■□□ 2.97
PROM1-202ENST00000502501 DCAF8L1A6NGE4 600 aa33.61■■■□□ 2.97
PROM1-202ENST00000502501 CHL1O00533 1208 aa33.61■■■□□ 2.97
PROM1-202ENST00000502501 A1BGP04217 495 aa33.61■■■□□ 2.97
PROM1-202ENST00000502501 FKBP8Q14318 412 aa33.61■■■□□ 2.97
PROM1-202ENST00000502501 USPL1Q5W0Q7 1092 aa33.61■■■□□ 2.97
PROM1-202ENST00000502501 RGL2O15211 777 aa33.6■■■□□ 2.97
PROM1-202ENST00000502501 CALD1Q05682 793 aaKnown RBP33.59■■■□□ 2.97
PROM1-202ENST00000502501 ERBB4Q15303 1308 aa33.58■■■□□ 2.97
PROM1-202ENST00000502501 NRXN2Q9P2S2 1712 aa33.58■■■□□ 2.97
PROM1-202ENST00000502501 TM4SF1P30408 202 aa33.57■■■□□ 2.96
PROM1-202ENST00000502501 BCL2L12Q9HB09 334 aa33.57■■■□□ 2.96
PROM1-202ENST00000502501 PARP3Q9Y6F1 533 aa33.57■■■□□ 2.96
PROM1-202ENST00000502501 CCDC27Q2M243 656 aa33.56■■■□□ 2.96
PROM1-202ENST00000502501 NPM2Q86SE8 214 aaKnown RBP33.56■■■□□ 2.96
PROM1-202ENST00000502501 KLHL34Q8N239 644 aa33.56■■■□□ 2.96
PROM1-202ENST00000502501 NLGN2Q8NFZ4 835 aa33.56■■■□□ 2.96
PROM1-202ENST00000502501 CFAP44Q96MT7 982 aa33.56■■■□□ 2.96
PROM1-202ENST00000502501 KIAA1551Q9HCM1 1747 aa33.54■■■□□ 2.96
PROM1-202ENST00000502501 NBPF26B4DH59 902 aa33.54■■■□□ 2.96
PROM1-202ENST00000502501 DDR1Q08345 913 aa33.54■■■□□ 2.96
PROM1-202ENST00000502501 NBPF10Q6P3W6 841 aaKnown RBP33.54■■■□□ 2.96
PROM1-202ENST00000502501 NBPF15Q8N660 670 aa33.54■■■□□ 2.96
PROM1-202ENST00000502501 POLRMTO00411 1230 aaKnown RBP33.52■■■□□ 2.96
PROM1-202ENST00000502501 ZNF853P0CG23 659 aa33.52■■■□□ 2.96
PROM1-202ENST00000502501 IFT57Q9NWB7 429 aa33.52■■■□□ 2.96
PROM1-202ENST00000502501 CAMTA2O94983 1202 aa33.51■■■□□ 2.95
PROM1-202ENST00000502501 HOXB7P09629 217 aa33.5■■■□□ 2.95
PROM1-202ENST00000502501 NFIXQ14938 502 aa33.5■■■□□ 2.95
PROM1-202ENST00000502501 TGFB2P61812 414 aa33.49■■■□□ 2.95
PROM1-202ENST00000502501 CLEC4GQ6UXB4 293 aa33.49■■■□□ 2.95
PROM1-202ENST00000502501 DZIP3Q86Y13 1208 aaKnown RBP33.49■■■□□ 2.95
PROM1-202ENST00000502501 PXDNLA1KZ92 1463 aa33.49■■■□□ 2.95
PROM1-202ENST00000502501 TBC1D2BQ9UPU7 963 aa33.48■■■□□ 2.95
PROM1-202ENST00000502501 ZNF330Q9Y3S2 320 aaPredicted RBP33.48■■■□□ 2.95
PROM1-202ENST00000502501 AFDNP55196 1824 aaKnown RBP33.48■■■□□ 2.95
PROM1-202ENST00000502501 GNAI1P63096 354 aa33.47■■■□□ 2.95
PROM1-202ENST00000502501 CARMIL3Q8ND23 1372 aa33.45■■■□□ 2.94
PROM1-202ENST00000502501 PIP4K2AP48426 406 aaPredicted RBP33.44■■■□□ 2.94
PROM1-202ENST00000502501 NGEFQ8N5V2 710 aa33.44■■■□□ 2.94
PROM1-202ENST00000502501 ZNF652Q9Y2D9 606 aa33.44■■■□□ 2.94
PROM1-202ENST00000502501 MBIPQ9NS73 344 aa33.43■■■□□ 2.94
PROM1-202ENST00000502501 BRCA1P38398 1863 aaKnown RBP33.42■■■□□ 2.94
PROM1-202ENST00000502501 LAS1LQ9Y4W2 734 aaKnown RBP33.41■■■□□ 2.94
PROM1-202ENST00000502501 IL16Q14005 1332 aa33.41■■■□□ 2.94
PROM1-202ENST00000502501 ERVV-1B6SEH8 477 aa33.4■■■□□ 2.94
PROM1-202ENST00000502501 GPR162Q16538 588 aa33.4■■■□□ 2.94
PROM1-202ENST00000502501 TBC1D9BQ66K14 1250 aa33.4■■■□□ 2.94
PROM1-202ENST00000502501 LRP10Q7Z4F1 713 aa33.4■■■□□ 2.94
PROM1-202ENST00000502501 WWC1Q8IX03 1113 aa33.4■■■□□ 2.94
PROM1-202ENST00000502501 SERPINB2P05120 415 aa33.39■■■□□ 2.94
PROM1-202ENST00000502501 GRIN3BO60391 1043 aa33.38■■■□□ 2.93
PROM1-202ENST00000502501 PDIA6Q15084 440 aa33.38■■■□□ 2.93
PROM1-202ENST00000502501 N4BP2Q86UW6 1770 aaPredicted RBP33.38■■■□□ 2.93
PROM1-202ENST00000502501 ATP10DQ9P241 1426 aa33.36■■■□□ 2.93
PROM1-202ENST00000502501 CHD4Q14839 1912 aa33.36■■■□□ 2.93
PROM1-202ENST00000502501 CCER2I3L3R5 266 aa33.36■■■□□ 2.93
PROM1-202ENST00000502501 SETDB2Q96T68 719 aa33.36■■■□□ 2.93
PROM1-202ENST00000502501 MAP3K15Q6ZN16 1313 aa33.35■■■□□ 2.93
PROM1-202ENST00000502501 DLEC1Q9Y238 1755 aa33.35■■■□□ 2.93
PROM1-202ENST00000502501 YBX3P16989 372 aaKnown RBP eCLIP33.35■■■□□ 2.93
PROM1-202ENST00000502501 KRT24Q2M2I5 525 aa33.34■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms