RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 NGDNQ8NEJ9 315 aaKnown RBP8.27□□□□□ -1.09
SPTA1-209ENST00000498708 KLRG1Q96E93 195 aa8.27□□□□□ -1.09
SPTA1-209ENST00000498708 HIRIP3Q9BW71 556 aaPredicted RBP8.27□□□□□ -1.09
SPTA1-209ENST00000498708 FAM198AQ9UFP1 575 aa8.27□□□□□ -1.09
SPTA1-209ENST00000498708 AKAP12Q02952 1782 aa8.27□□□□□ -1.09
SPTA1-209ENST00000498708 TOPAZ1Q8N9V7 1692 aa8.27□□□□□ -1.09
SPTA1-209ENST00000498708 WDR90Q96KV7 1748 aa8.26□□□□□ -1.09
SPTA1-209ENST00000498708 AATKQ6ZMQ8 1374 aa8.26□□□□□ -1.09
SPTA1-209ENST00000498708 POLD1P28340 1107 aa8.26□□□□□ -1.09
SPTA1-209ENST00000498708 RGL3Q3MIN7 710 aa8.26□□□□□ -1.09
SPTA1-209ENST00000498708 NECTIN2Q92692 538 aa8.26□□□□□ -1.09
SPTA1-209ENST00000498708 CDHR5Q9HBB8 845 aa8.26□□□□□ -1.09
SPTA1-209ENST00000498708 COL5A2P05997 1499 aaPredicted RBP8.26□□□□□ -1.09
SPTA1-209ENST00000498708 NUDT18Q6ZVK8 323 aa8.25□□□□□ -1.09
SPTA1-209ENST00000498708 TTC13Q8NBP0 860 aa8.25□□□□□ -1.09
SPTA1-209ENST00000498708 KCNV2Q8TDN2 545 aa8.25□□□□□ -1.09
SPTA1-209ENST00000498708 LRRC4BQ9NT99 713 aa8.25□□□□□ -1.09
SPTA1-209ENST00000498708 WWC3Q9ULE0 1092 aa8.25□□□□□ -1.09
SPTA1-209ENST00000498708 BCL9O00512 1426 aa8.25□□□□□ -1.09
SPTA1-209ENST00000498708 CRB1P82279 1406 aa8.25□□□□□ -1.09
SPTA1-209ENST00000498708 PIK3C2GO75747 1445 aa8.24□□□□□ -1.09
SPTA1-209ENST00000498708 SLC16A10Q8TF71 515 aa8.24□□□□□ -1.09
SPTA1-209ENST00000498708 NPDC1Q9NQX5 325 aaPredicted RBP8.24□□□□□ -1.09
SPTA1-209ENST00000498708 PNPLA7Q6ZV29 1317 aa8.24□□□□□ -1.09
SPTA1-209ENST00000498708 TUBGCP6Q96RT7 1819 aa8.24□□□□□ -1.09
SPTA1-209ENST00000498708 CPDO75976 1380 aa8.23□□□□□ -1.09
SPTA1-209ENST00000498708 TOMM70O94826 608 aa8.23□□□□□ -1.09
SPTA1-209ENST00000498708 SLC4A3P48751 1232 aa8.23□□□□□ -1.09
SPTA1-209ENST00000498708 CFAP70Q5T0N1 1121 aa8.23□□□□□ -1.09
SPTA1-209ENST00000498708 ACSBG1Q96GR2 724 aa8.23□□□□□ -1.09
SPTA1-209ENST00000498708 C14orf93Q9H972 538 aaKnown RBP8.23□□□□□ -1.09
SPTA1-209ENST00000498708 POGKQ9P215 609 aa8.23□□□□□ -1.09
SPTA1-209ENST00000498708 WNK3Q9BYP7 1800 aa8.23□□□□□ -1.09
SPTA1-209ENST00000498708 MINK1Q8N4C8 1332 aaPredicted RBP8.23□□□□□ -1.09
SPTA1-209ENST00000498708 QSER1Q2KHR3 1735 aa8.23□□□□□ -1.09
SPTA1-209ENST00000498708 ARHGEF28Q8N1W1 1705 aaKnown RBP8.23□□□□□ -1.09
SPTA1-209ENST00000498708 ZBTB7CA1YPR0 619 aa8.22□□□□□ -1.09
SPTA1-209ENST00000498708 C3orf80F5H4A9 247 aa8.22□□□□□ -1.09
SPTA1-209ENST00000498708 PADI6Q6TGC4 694 aa8.22□□□□□ -1.09
SPTA1-209ENST00000498708 TULP4Q9NRJ4 1543 aa8.21□□□□□ -1.1
SPTA1-209ENST00000498708 WASLO00401 505 aaPredicted RBP8.21□□□□□ -1.1
SPTA1-209ENST00000498708 TOM1L2Q6ZVM7 507 aa8.21□□□□□ -1.1
SPTA1-209ENST00000498708 IRX2Q9BZI1 471 aaPredicted RBP8.21□□□□□ -1.1
SPTA1-209ENST00000498708 KAT6BQ8WYB5 2073 aa8.21□□□□□ -1.1
SPTA1-209ENST00000498708 BTAF1O14981 1849 aa8.21□□□□□ -1.1
SPTA1-209ENST00000498708 ANKRD30BQ9BXX2 1392 aa8.21□□□□□ -1.1
SPTA1-209ENST00000498708 NHSQ6T4R5 1651 aa8.21□□□□□ -1.1
SPTA1-209ENST00000498708 SPATA31E1Q6ZUB1 1445 aa8.2□□□□□ -1.1
SPTA1-209ENST00000498708 GCP02774 474 aa8.2□□□□□ -1.1
SPTA1-209ENST00000498708 MLLT3P42568 568 aaPredicted RBP8.2□□□□□ -1.1
SPTA1-209ENST00000498708 KCNQ4P56696 695 aa8.2□□□□□ -1.1
SPTA1-209ENST00000498708 SLF2Q8IX21 1173 aa8.2□□□□□ -1.1
SPTA1-209ENST00000498708 ABTB2Q8N961 1025 aa8.2□□□□□ -1.1
SPTA1-209ENST00000498708 USP19O94966 1318 aa8.2□□□□□ -1.1
SPTA1-209ENST00000498708 EXOC5O00471 708 aa8.19□□□□□ -1.1
SPTA1-209ENST00000498708 RNF40O75150 1001 aa8.19□□□□□ -1.1
SPTA1-209ENST00000498708 HSPA1AP0DMV8 641 aaKnown RBP8.19□□□□□ -1.1
SPTA1-209ENST00000498708 HSPA1BP0DMV9 641 aaKnown RBP8.19□□□□□ -1.1
SPTA1-209ENST00000498708 TJAP1Q5JTD0 557 aa8.19□□□□□ -1.1
SPTA1-209ENST00000498708 NMRK2Q9NPI5 230 aa8.19□□□□□ -1.1
SPTA1-209ENST00000498708 COL18A1P39060 1754 aa8.18□□□□□ -1.1
SPTA1-209ENST00000498708 MSL1Q68DK7 614 aa8.18□□□□□ -1.1
SPTA1-209ENST00000498708 NUDT16Q96DE0 195 aaKnown RBP8.18□□□□□ -1.1
SPTA1-209ENST00000498708 IL21Q9HBE4 155 aa8.18□□□□□ -1.1
SPTA1-209ENST00000498708 TFCP2L1Q9NZI6 479 aa8.18□□□□□ -1.1
SPTA1-209ENST00000498708 TRAK1Q9UPV9 953 aa8.18□□□□□ -1.1
SPTA1-209ENST00000498708 RGPD5Q99666 1765 aa8.17□□□□□ -1.1
SPTA1-209ENST00000498708 PTGDRQ13258 359 aa8.17□□□□□ -1.1
SPTA1-209ENST00000498708 EYA1Q99502 592 aa8.17□□□□□ -1.1
SPTA1-209ENST00000498708 MPHOSPH9Q99550 1183 aa8.17□□□□□ -1.1
SPTA1-209ENST00000498708 CDCA7Q9BWT1 371 aaPredicted RBP8.17□□□□□ -1.1
SPTA1-209ENST00000498708 ACEP12821 1306 aa8.17□□□□□ -1.1
SPTA1-209ENST00000498708 EIF3AQ14152 1382 aaKnown RBP8.17□□□□□ -1.1
SPTA1-209ENST00000498708 USP6P35125 1406 aa8.17□□□□□ -1.1
SPTA1-209ENST00000498708 ITSN1Q15811 1721 aa8.17□□□□□ -1.1
SPTA1-209ENST00000498708 BRD4O60885 1362 aaPredicted RBP8.16□□□□□ -1.1
SPTA1-209ENST00000498708 SWT1Q5T5J6 900 aaKnown RBP8.16□□□□□ -1.1
SPTA1-209ENST00000498708 TNS2Q63HR2 1409 aa8.16□□□□□ -1.1
SPTA1-209ENST00000498708 COL23A1Q86Y22 540 aaPredicted RBP8.16□□□□□ -1.1
SPTA1-209ENST00000498708 WDR17Q8IZU2 1322 aa8.16□□□□□ -1.1
SPTA1-209ENST00000498708 RBM46Q8TBY0 533 aaKnown RBP8.16□□□□□ -1.1
SPTA1-209ENST00000498708 MTRQ99707 1265 aa8.16□□□□□ -1.1
SPTA1-209ENST00000498708 PRR14Q9BWN1 585 aa8.16□□□□□ -1.1
SPTA1-209ENST00000498708 CD2APQ9Y5K6 639 aa8.16□□□□□ -1.1
SPTA1-209ENST00000498708 POLR3AO14802 1390 aaPredicted RBP8.15□□□□□ -1.1
SPTA1-209ENST00000498708 FAM161AQ3B820 660 aa8.15□□□□□ -1.1
SPTA1-209ENST00000498708 NLRP13Q86W25 1043 aa8.15□□□□□ -1.1
SPTA1-209ENST00000498708 CARD10Q9BWT7 1032 aa8.15□□□□□ -1.1
SPTA1-209ENST00000498708 IGSF1Q8N6C5 1336 aa8.14□□□□□ -1.11
SPTA1-209ENST00000498708 PLCB2Q00722 1185 aa8.14□□□□□ -1.11
SPTA1-209ENST00000498708 SLC27A3Q5K4L6 730 aa8.14□□□□□ -1.11
SPTA1-209ENST00000498708 FCHSD2O94868 740 aa8.13□□□□□ -1.11
SPTA1-209ENST00000498708 DNAJB2P25686 324 aa8.13□□□□□ -1.11
SPTA1-209ENST00000498708 FSTL1Q12841 308 aa8.13□□□□□ -1.11
SPTA1-209ENST00000498708 ADGRB1O14514 1584 aa8.13□□□□□ -1.11
SPTA1-209ENST00000498708 C16orf71Q8IYS4 520 aaPredicted RBP8.12□□□□□ -1.11
SPTA1-209ENST00000498708 CDK19Q9BWU1 502 aa8.12□□□□□ -1.11
SPTA1-209ENST00000498708 PLEKHG3A1L390 1219 aa8.11□□□□□ -1.11
SPTA1-209ENST00000498708 SEMA3EO15041 775 aa8.11□□□□□ -1.11
SPTA1-209ENST00000498708 CSB-PGBD3P0DP91 1061 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms