RNA–Protein interactions for RNA: ENST00000498613.1

TMEM39B-209, Transcript of transmembrane protein 39B, humanhuman

TSL 3

Gene TMEM39B, Length 854 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-209ENST00000498613 UTRNP46939 3433 aa16.47■□□□□ 0.23
TMEM39B-209ENST00000498613 LY75O60449 1722 aa16.47■□□□□ 0.23
TMEM39B-209ENST00000498613 SOS1Q07889 1333 aaPredicted RBP16.46■□□□□ 0.23
TMEM39B-209ENST00000498613 E9PSI1 815 aa16.46■□□□□ 0.23
TMEM39B-209ENST00000498613 HOXB7P09629 217 aa16.46■□□□□ 0.23
TMEM39B-209ENST00000498613 EIF2S2P20042 333 aaKnown RBP16.46■□□□□ 0.23
TMEM39B-209ENST00000498613 CANXP27824 592 aaKnown RBP16.46■□□□□ 0.23
TMEM39B-209ENST00000498613 RFC4P35249 363 aa16.46■□□□□ 0.23
TMEM39B-209ENST00000498613 ARXQ96QS3 562 aa16.46■□□□□ 0.23
TMEM39B-209ENST00000498613 USP16Q9Y5T5 823 aa16.46■□□□□ 0.23
TMEM39B-209ENST00000498613 ZPR1O75312 459 aa16.44■□□□□ 0.22
TMEM39B-209ENST00000498613 PHF14O94880 888 aa16.44■□□□□ 0.22
TMEM39B-209ENST00000498613 ZNF827Q17R98 1081 aa16.44■□□□□ 0.22
TMEM39B-209ENST00000498613 DUSP27Q5VZP5 1158 aa16.44■□□□□ 0.22
TMEM39B-209ENST00000498613 ZNF330Q9Y3S2 320 aaPredicted RBP16.44■□□□□ 0.22
TMEM39B-209ENST00000498613 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.43■□□□□ 0.22
TMEM39B-209ENST00000498613 IL6STP40189 918 aaPredicted RBP16.43■□□□□ 0.22
TMEM39B-209ENST00000498613 INTS5Q6P9B9 1019 aaKnown RBP16.43■□□□□ 0.22
TMEM39B-209ENST00000498613 ANO8Q9HCE9 1232 aaPredicted RBP16.43■□□□□ 0.22
TMEM39B-209ENST00000498613 SIPA1L3O60292 1781 aaPredicted RBP16.43■□□□□ 0.22
TMEM39B-209ENST00000498613 ERBB4Q15303 1308 aa16.43■□□□□ 0.22
TMEM39B-209ENST00000498613 KCPQ6ZWJ8 1503 aa16.42■□□□□ 0.22
TMEM39B-209ENST00000498613 ELL2O00472 640 aaPredicted RBP16.42■□□□□ 0.22
TMEM39B-209ENST00000498613 A1BGP04217 495 aa16.42■□□□□ 0.22
TMEM39B-209ENST00000498613 CCDC30Q5VVM6 783 aa16.42■□□□□ 0.22
TMEM39B-209ENST00000498613 TSR2Q969E8 191 aaKnown RBP16.42■□□□□ 0.22
TMEM39B-209ENST00000498613 ZNF831Q5JPB2 1677 aa16.42■□□□□ 0.22
TMEM39B-209ENST00000498613 HDGFL1Q5TGJ6 251 aa16.41■□□□□ 0.22
TMEM39B-209ENST00000498613 STK31Q9BXU1 1019 aa16.41■□□□□ 0.22
TMEM39B-209ENST00000498613 DCAF8L1A6NGE4 600 aa16.4■□□□□ 0.22
TMEM39B-209ENST00000498613 TWISTNBQ3B726 338 aaPredicted RBP16.4■□□□□ 0.22
TMEM39B-209ENST00000498613 COL23A1Q86Y22 540 aaPredicted RBP16.4■□□□□ 0.22
TMEM39B-209ENST00000498613 NLGN1Q8N2Q7 840 aa16.4■□□□□ 0.22
TMEM39B-209ENST00000498613 ARHGEF1Q92888 912 aaKnown RBP16.4■□□□□ 0.22
TMEM39B-209ENST00000498613 DBF4Q9UBU7 674 aaPredicted RBP16.4■□□□□ 0.22
TMEM39B-209ENST00000498613 ZBTB1Q9Y2K1 713 aa16.4■□□□□ 0.22
TMEM39B-209ENST00000498613 PNPLA7Q6ZV29 1317 aa16.4■□□□□ 0.22
TMEM39B-209ENST00000498613 ZNF521Q96K83 1311 aa16.4■□□□□ 0.22
TMEM39B-209ENST00000498613 PAPPAQ13219 1627 aa16.39■□□□□ 0.21
TMEM39B-209ENST00000498613 PRAMEF22A3QJZ6 481 aa16.39■□□□□ 0.21
TMEM39B-209ENST00000498613 POLD1P28340 1107 aa16.39■□□□□ 0.21
TMEM39B-209ENST00000498613 EIF5P55010 431 aaKnown RBP16.39■□□□□ 0.21
TMEM39B-209ENST00000498613 SLFN5Q08AF3 891 aa16.39■□□□□ 0.21
TMEM39B-209ENST00000498613 MTFR1LQ9H019 292 aa16.39■□□□□ 0.21
TMEM39B-209ENST00000498613 C5P01031 1676 aa16.39■□□□□ 0.21
TMEM39B-209ENST00000498613 FANCIQ9NVI1 1328 aa16.39■□□□□ 0.21
TMEM39B-209ENST00000498613 MYL6BP14649 208 aa16.38■□□□□ 0.21
TMEM39B-209ENST00000498613 EXOSC9Q06265 439 aaKnown RBP16.38■□□□□ 0.21
TMEM39B-209ENST00000498613 C8orf58Q8NAV2 365 aa16.38■□□□□ 0.21
TMEM39B-209ENST00000498613 PDGFDQ9GZP0 370 aaPredicted RBP16.38■□□□□ 0.21
TMEM39B-209ENST00000498613 HYPKQ9NX55 129 aa16.38■□□□□ 0.21
TMEM39B-209ENST00000498613 C4BP0C0L5 1744 aa16.38■□□□□ 0.21
TMEM39B-209ENST00000498613 CHD4Q14839 1912 aa16.37■□□□□ 0.21
TMEM39B-209ENST00000498613 UBR2Q8IWV8 1755 aa16.37■□□□□ 0.21
TMEM39B-209ENST00000498613 KIF6Q6ZMV9 814 aa16.37■□□□□ 0.21
TMEM39B-209ENST00000498613 NECTIN2Q92692 538 aa16.37■□□□□ 0.21
TMEM39B-209ENST00000498613 DDX21Q9NR30 783 aaKnown RBP eCLIP16.37■□□□□ 0.21
TMEM39B-209ENST00000498613 NARFQ9UHQ1 456 aa16.37■□□□□ 0.21
TMEM39B-209ENST00000498613 ZNF652Q9Y2D9 606 aa16.37■□□□□ 0.21
TMEM39B-209ENST00000498613 TAF1LQ8IZX4 1826 aa16.37■□□□□ 0.21
TMEM39B-209ENST00000498613 KDM3BQ7LBC6 1761 aa16.36■□□□□ 0.21
TMEM39B-209ENST00000498613 KRT24Q2M2I5 525 aa16.36■□□□□ 0.21
TMEM39B-209ENST00000498613 DZIP3Q86Y13 1208 aaKnown RBP16.36■□□□□ 0.21
TMEM39B-209ENST00000498613 ZNF428Q96B54 188 aa16.36■□□□□ 0.21
TMEM39B-209ENST00000498613 ZBED9Q6R2W3 1325 aa16.36■□□□□ 0.21
TMEM39B-209ENST00000498613 ZBTB7AO95365 584 aa16.35■□□□□ 0.21
TMEM39B-209ENST00000498613 CT47B1P0C2W7 299 aaPredicted RBP16.35■□□□□ 0.21
TMEM39B-209ENST00000498613 TBC1D2BQ9UPU7 963 aa16.35■□□□□ 0.21
TMEM39B-209ENST00000498613 ATF5Q9Y2D1 282 aaPredicted RBP16.35■□□□□ 0.21
TMEM39B-209ENST00000498613 NBPF26B4DH59 902 aa16.34■□□□□ 0.21
TMEM39B-209ENST00000498613 DDX58O95786 925 aaKnown RBP16.34■□□□□ 0.21
TMEM39B-209ENST00000498613 PTGER2P43116 358 aa16.34■□□□□ 0.21
TMEM39B-209ENST00000498613 NBPF10Q6P3W6 841 aaKnown RBP16.34■□□□□ 0.21
TMEM39B-209ENST00000498613 NBPF15Q8N660 670 aa16.34■□□□□ 0.21
TMEM39B-209ENST00000498613 ZNF784Q8NCA9 323 aaPredicted RBP16.34■□□□□ 0.21
TMEM39B-209ENST00000498613 CDCA7LQ96GN5 454 aa16.34■□□□□ 0.21
TMEM39B-209ENST00000498613 SPINK5Q9NQ38 1064 aaPredicted RBP16.34■□□□□ 0.21
TMEM39B-209ENST00000498613 COL15A1P39059 1388 aa16.34■□□□□ 0.21
TMEM39B-209ENST00000498613 RGL2O15211 777 aa16.33■□□□□ 0.2
TMEM39B-209ENST00000498613 VAMP4O75379 141 aa16.33■□□□□ 0.2
TMEM39B-209ENST00000498613 PIP4K2AP48426 406 aaPredicted RBP16.33■□□□□ 0.2
TMEM39B-209ENST00000498613 USPL1Q5W0Q7 1092 aa16.33■□□□□ 0.2
TMEM39B-209ENST00000498613 CLEC4GQ6UXB4 293 aa16.33■□□□□ 0.2
TMEM39B-209ENST00000498613 TSPYL6Q8N831 410 aa16.33■□□□□ 0.2
TMEM39B-209ENST00000498613 CHPF2Q9P2E5 772 aa16.33■□□□□ 0.2
TMEM39B-209ENST00000498613 ERVV-1B6SEH8 477 aa16.32■□□□□ 0.2
TMEM39B-209ENST00000498613 SLC4A2P04920 1241 aa16.32■□□□□ 0.2
TMEM39B-209ENST00000498613 TJP1Q07157 1748 aa16.32■□□□□ 0.2
TMEM39B-209ENST00000498613 AIMP1Q12904 312 aaKnown RBP16.32■□□□□ 0.2
TMEM39B-209ENST00000498613 SMIM5Q71RC9 77 aa16.32■□□□□ 0.2
TMEM39B-209ENST00000498613 CICQ96RK0 1608 aaPredicted RBP16.32■□□□□ 0.2
TMEM39B-209ENST00000498613 USP42Q9H9J4 1324 aaKnown RBP16.32■□□□□ 0.2
TMEM39B-209ENST00000498613 PARP3Q9Y6F1 533 aa16.32■□□□□ 0.2
TMEM39B-209ENST00000498613 COL5A3P25940 1745 aaPredicted RBP16.31■□□□□ 0.2
TMEM39B-209ENST00000498613 COPS6Q7L5N1 327 aa16.31■□□□□ 0.2
TMEM39B-209ENST00000498613 TRMT2AQ8IZ69 625 aaKnown RBP16.31■□□□□ 0.2
TMEM39B-209ENST00000498613 MYH14Q7Z406 1995 aaKnown RBP16.3■□□□□ 0.2
TMEM39B-209ENST00000498613 NPHP1O15259 732 aa16.3■□□□□ 0.2
TMEM39B-209ENST00000498613 GYS1P13807 737 aa16.3■□□□□ 0.2
TMEM39B-209ENST00000498613 HSP90AB3PQ58FF7 597 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms