RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 NLGN1Q8N2Q7 840 aa16.83■□□□□ 0.28
HSPG2-213ENST00000498495 SIPA1L3O60292 1781 aaPredicted RBP16.82■□□□□ 0.28
HSPG2-213ENST00000498495 SNRPA1P09661 255 aaKnown RBP16.82■□□□□ 0.28
HSPG2-213ENST00000498495 MRS2Q9HD23 443 aa16.82■□□□□ 0.28
HSPG2-213ENST00000498495 ZBTB1Q9Y2K1 713 aa16.82■□□□□ 0.28
HSPG2-213ENST00000498495 TJP1Q07157 1748 aa16.82■□□□□ 0.28
HSPG2-213ENST00000498495 MYH14Q7Z406 1995 aaKnown RBP16.81■□□□□ 0.28
HSPG2-213ENST00000498495 DLG5Q8TDM6 1919 aa16.81■□□□□ 0.28
HSPG2-213ENST00000498495 USP16Q9Y5T5 823 aa16.81■□□□□ 0.28
HSPG2-213ENST00000498495 SOS1Q07889 1333 aaPredicted RBP16.8■□□□□ 0.28
HSPG2-213ENST00000498495 ZPR1O75312 459 aa16.8■□□□□ 0.28
HSPG2-213ENST00000498495 NPM2Q86SE8 214 aaKnown RBP16.8■□□□□ 0.28
HSPG2-213ENST00000498495 UBR2Q8IWV8 1755 aa16.79■□□□□ 0.28
HSPG2-213ENST00000498495 APAF1O14727 1248 aa16.79■□□□□ 0.28
HSPG2-213ENST00000498495 GYS1P13807 737 aa16.79■□□□□ 0.28
HSPG2-213ENST00000498495 SRP68Q9UHB9 627 aaKnown RBP16.79■□□□□ 0.28
HSPG2-213ENST00000498495 CICQ96RK0 1608 aaPredicted RBP16.78■□□□□ 0.28
HSPG2-213ENST00000498495 A0A087WZG4 1122 aa16.78■□□□□ 0.28
HSPG2-213ENST00000498495 PRAMEF22A3QJZ6 481 aa16.78■□□□□ 0.28
HSPG2-213ENST00000498495 A1BGP04217 495 aa16.78■□□□□ 0.28
HSPG2-213ENST00000498495 MMP10P09238 476 aa16.78■□□□□ 0.28
HSPG2-213ENST00000498495 TSPYL4Q9UJ04 414 aa16.78■□□□□ 0.28
HSPG2-213ENST00000498495 TRIM35Q9UPQ4 493 aa16.78■□□□□ 0.28
HSPG2-213ENST00000498495 ZNF330Q9Y3S2 320 aaPredicted RBP16.78■□□□□ 0.28
HSPG2-213ENST00000498495 USP42Q9H9J4 1324 aaKnown RBP16.77■□□□□ 0.28
HSPG2-213ENST00000498495 COL24A1Q17RW2 1714 aa16.77■□□□□ 0.28
HSPG2-213ENST00000498495 IL6STP40189 918 aaPredicted RBP16.77■□□□□ 0.28
HSPG2-213ENST00000498495 EIF5P55010 431 aaKnown RBP16.77■□□□□ 0.28
HSPG2-213ENST00000498495 EIF4A1P60842 406 aaKnown RBP16.77■□□□□ 0.28
HSPG2-213ENST00000498495 USPL1Q5W0Q7 1092 aa16.77■□□□□ 0.28
HSPG2-213ENST00000498495 BABAM1Q9NWV8 329 aa16.77■□□□□ 0.28
HSPG2-213ENST00000498495 NARFQ9UHQ1 456 aa16.77■□□□□ 0.28
HSPG2-213ENST00000498495 LAS1LQ9Y4W2 734 aaKnown RBP16.76■□□□□ 0.27
HSPG2-213ENST00000498495 CD2APQ9Y5K6 639 aa16.76■□□□□ 0.27
HSPG2-213ENST00000498495 PARP3Q9Y6F1 533 aa16.76■□□□□ 0.27
HSPG2-213ENST00000498495 COL15A1P39059 1388 aa16.76■□□□□ 0.27
HSPG2-213ENST00000498495 GIGYF1O75420 1035 aaPredicted RBP16.75■□□□□ 0.27
HSPG2-213ENST00000498495 FKBP8Q14318 412 aa16.75■□□□□ 0.27
HSPG2-213ENST00000498495 TBC1D2BQ9UPU7 963 aa16.74■□□□□ 0.27
HSPG2-213ENST00000498495 PIP4K2AP48426 406 aaPredicted RBP16.73■□□□□ 0.27
HSPG2-213ENST00000498495 NLGN2Q8NFZ4 835 aa16.73■□□□□ 0.27
HSPG2-213ENST00000498495 CHL1O00533 1208 aa16.72■□□□□ 0.27
HSPG2-213ENST00000498495 TM4SF1P30408 202 aa16.71■□□□□ 0.27
HSPG2-213ENST00000498495 CALD1Q05682 793 aaKnown RBP16.71■□□□□ 0.27
HSPG2-213ENST00000498495 GPR162Q16538 588 aa16.71■□□□□ 0.27
HSPG2-213ENST00000498495 NBPF26B4DH59 902 aa16.7■□□□□ 0.26
HSPG2-213ENST00000498495 NBPF10Q6P3W6 841 aaKnown RBP16.7■□□□□ 0.26
HSPG2-213ENST00000498495 DZIP3Q86Y13 1208 aaKnown RBP16.7■□□□□ 0.26
HSPG2-213ENST00000498495 PELP1Q8IZL8 1130 aaKnown RBP16.7■□□□□ 0.26
HSPG2-213ENST00000498495 FAM9BQ8IZU0 186 aa16.7■□□□□ 0.26
HSPG2-213ENST00000498495 NBPF15Q8N660 670 aa16.7■□□□□ 0.26
HSPG2-213ENST00000498495 CFAP44Q96MT7 982 aa16.7■□□□□ 0.26
HSPG2-213ENST00000498495 BCL2L12Q9HB09 334 aa16.7■□□□□ 0.26
HSPG2-213ENST00000498495 C4AP0C0L4 1744 aa16.7■□□□□ 0.26
HSPG2-213ENST00000498495 SENP3-EIF4A1A0A087X0R7 540 aa16.69■□□□□ 0.26
HSPG2-213ENST00000498495 EIF2S2P20042 333 aaKnown RBP16.69■□□□□ 0.26
HSPG2-213ENST00000498495 NFIXQ14938 502 aa16.69■□□□□ 0.26
HSPG2-213ENST00000498495 BICDL1Q6ZP65 573 aa16.69■□□□□ 0.26
HSPG2-213ENST00000498495 KDM3BQ7LBC6 1761 aa16.69■□□□□ 0.26
HSPG2-213ENST00000498495 DDR1Q08345 913 aa16.68■□□□□ 0.26
HSPG2-213ENST00000498495 NGEFQ8N5V2 710 aa16.68■□□□□ 0.26
HSPG2-213ENST00000498495 POLRMTO00411 1230 aaKnown RBP16.67■□□□□ 0.26
HSPG2-213ENST00000498495 TGFB2P61812 414 aa16.67■□□□□ 0.26
HSPG2-213ENST00000498495 GNAI1P63096 354 aa16.67■□□□□ 0.26
HSPG2-213ENST00000498495 CAMTA2O94983 1202 aa16.66■□□□□ 0.26
HSPG2-213ENST00000498495 SERPINB2P05120 415 aa16.66■□□□□ 0.26
HSPG2-213ENST00000498495 MYL6BP14649 208 aa16.66■□□□□ 0.26
HSPG2-213ENST00000498495 TBC1D9BQ66K14 1250 aa16.66■□□□□ 0.26
HSPG2-213ENST00000498495 IFT57Q9NWB7 429 aa16.66■□□□□ 0.26
HSPG2-213ENST00000498495 ZNF853P0CG23 659 aa16.65■□□□□ 0.26
HSPG2-213ENST00000498495 CCDC27Q2M243 656 aa16.65■□□□□ 0.26
HSPG2-213ENST00000498495 CLEC4GQ6UXB4 293 aa16.65■□□□□ 0.26
HSPG2-213ENST00000498495 SETDB2Q96T68 719 aa16.65■□□□□ 0.26
HSPG2-213ENST00000498495 MBIPQ9NS73 344 aa16.65■□□□□ 0.26
HSPG2-213ENST00000498495 ZNF652Q9Y2D9 606 aa16.65■□□□□ 0.26
HSPG2-213ENST00000498495 SALL2Q9Y467 1007 aaPredicted RBP16.65■□□□□ 0.26
HSPG2-213ENST00000498495 KRT24Q2M2I5 525 aa16.64■□□□□ 0.25
HSPG2-213ENST00000498495 NCBP3Q53F19 620 aaKnown RBP16.64■□□□□ 0.25
HSPG2-213ENST00000498495 WWC1Q8IX03 1113 aa16.64■□□□□ 0.25
HSPG2-213ENST00000498495 NECTIN2Q92692 538 aa16.64■□□□□ 0.25
HSPG2-213ENST00000498495 ERBB4Q15303 1308 aa16.64■□□□□ 0.25
HSPG2-213ENST00000498495 A0A0G2JLW4 131 aa16.63■□□□□ 0.25
HSPG2-213ENST00000498495 GRIN3BO60391 1043 aa16.62■□□□□ 0.25
HSPG2-213ENST00000498495 DUSP27Q5VZP5 1158 aa16.62■□□□□ 0.25
HSPG2-213ENST00000498495 KIF6Q6ZMV9 814 aa16.62■□□□□ 0.25
HSPG2-213ENST00000498495 WWC3Q9ULE0 1092 aa16.62■□□□□ 0.25
HSPG2-213ENST00000498495 ERVV-1B6SEH8 477 aa16.61■□□□□ 0.25
HSPG2-213ENST00000498495 RGL2O15211 777 aa16.61■□□□□ 0.25
HSPG2-213ENST00000498495 NPHP1O15259 732 aa16.61■□□□□ 0.25
HSPG2-213ENST00000498495 HOXB7P09629 217 aa16.61■□□□□ 0.25
HSPG2-213ENST00000498495 DPEP1P16444 411 aa16.61■□□□□ 0.25
HSPG2-213ENST00000498495 YBX3P16989 372 aaKnown RBP eCLIP16.61■□□□□ 0.25
HSPG2-213ENST00000498495 C10orf71Q711Q0 1435 aa16.61■□□□□ 0.25
HSPG2-213ENST00000498495 LAMB4A4D0S4 1761 aa16.6■□□□□ 0.25
HSPG2-213ENST00000498495 ELL2O00472 640 aaPredicted RBP16.6■□□□□ 0.25
HSPG2-213ENST00000498495 PDIA6Q15084 440 aa16.6■□□□□ 0.25
HSPG2-213ENST00000498495 HLFQ16534 295 aa16.6■□□□□ 0.25
HSPG2-213ENST00000498495 HDGFL1Q5TGJ6 251 aa16.6■□□□□ 0.25
HSPG2-213ENST00000498495 TTLL7Q6ZT98 887 aa16.6■□□□□ 0.25
HSPG2-213ENST00000498495 ANXA1P04083 346 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms