RNA–Protein interactions for RNA: ENST00000498474.2

PUDP-205, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 4

Gene PUDP, Length 1,040 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-205ENST00000498474 TMC1Q8TDI8 760 aa11.27□□□□□ -0.61
PUDP-205ENST00000498474 ADGRG1Q9Y653 693 aa11.27□□□□□ -0.61
PUDP-205ENST00000498474 CPDO75976 1380 aa11.27□□□□□ -0.61
PUDP-205ENST00000498474 COL5A2P05997 1499 aaPredicted RBP11.26□□□□□ -0.61
PUDP-205ENST00000498474 COL18A1P39060 1754 aa11.26□□□□□ -0.61
PUDP-205ENST00000498474 SLIT3O75094 1523 aa11.26□□□□□ -0.61
PUDP-205ENST00000498474 PPP1R18Q6NYC8 613 aa11.26□□□□□ -0.61
PUDP-205ENST00000498474 SLC12A5Q9H2X9 1139 aa11.26□□□□□ -0.61
PUDP-205ENST00000498474 KTN1Q86UP2 1357 aaKnown RBP11.26□□□□□ -0.61
PUDP-205ENST00000498474 TNS1Q9HBL0 1735 aaKnown RBP11.26□□□□□ -0.61
PUDP-205ENST00000498474 TRIM37O94972 964 aa11.25□□□□□ -0.61
PUDP-205ENST00000498474 TCP11L2Q8N4U5 519 aa11.25□□□□□ -0.61
PUDP-205ENST00000498474 RGPD1P0DJD0 1748 aa11.25□□□□□ -0.61
PUDP-205ENST00000498474 MON2Q7Z3U7 1717 aa11.25□□□□□ -0.61
PUDP-205ENST00000498474 CPSF1Q10570 1443 aaKnown RBP11.25□□□□□ -0.61
PUDP-205ENST00000498474 BAG6P46379 1132 aa11.24□□□□□ -0.61
PUDP-205ENST00000498474 EZH2Q15910 746 aaKnown RBP11.24□□□□□ -0.61
PUDP-205ENST00000498474 NME9Q86XW9 330 aa11.24□□□□□ -0.61
PUDP-205ENST00000498474 CD163L1Q9NR16 1453 aa11.24□□□□□ -0.61
PUDP-205ENST00000498474 ST20-MTHFSA0A0A6YYL1 179 aa11.23□□□□□ -0.61
PUDP-205ENST00000498474 PDE3BQ13370 1112 aa11.23□□□□□ -0.61
PUDP-205ENST00000498474 BARGINQ6ZT62 677 aa11.23□□□□□ -0.61
PUDP-205ENST00000498474 TOM1L2Q6ZVM7 507 aa11.23□□□□□ -0.61
PUDP-205ENST00000498474 BRD4O60885 1362 aaPredicted RBP11.23□□□□□ -0.61
PUDP-205ENST00000498474 DNAJB2P25686 324 aa11.22□□□□□ -0.61
PUDP-205ENST00000498474 RBM26Q5T8P6 1007 aaKnown RBP11.22□□□□□ -0.61
PUDP-205ENST00000498474 AATKQ6ZMQ8 1374 aa11.22□□□□□ -0.61
PUDP-205ENST00000498474 ARHGEF25Q86VW2 580 aa11.22□□□□□ -0.61
PUDP-205ENST00000498474 RBM46Q8TBY0 533 aaKnown RBP11.22□□□□□ -0.61
PUDP-205ENST00000498474 NFAT5O94916 1531 aa11.21□□□□□ -0.61
PUDP-205ENST00000498474 CRB1P82279 1406 aa11.21□□□□□ -0.61
PUDP-205ENST00000498474 SBNO2Q9Y2G9 1366 aa11.21□□□□□ -0.61
PUDP-205ENST00000498474 TTC21AQ8NDW8 1320 aa11.21□□□□□ -0.61
PUDP-205ENST00000498474 RCCD1A6NED2 376 aa11.21□□□□□ -0.61
PUDP-205ENST00000498474 FCHSD2O94868 740 aa11.21□□□□□ -0.61
PUDP-205ENST00000498474 FAM196AQ6ZSG2 479 aa11.21□□□□□ -0.61
PUDP-205ENST00000498474 TESK2Q96S53 571 aa11.21□□□□□ -0.61
PUDP-205ENST00000498474 PCGF6Q9BYE7 350 aa11.21□□□□□ -0.61
PUDP-205ENST00000498474 PRKD2Q9BZL6 878 aa11.21□□□□□ -0.61
PUDP-205ENST00000498474 TMEM134Q9H6X4 195 aa11.21□□□□□ -0.61
PUDP-205ENST00000498474 LTN1O94822 1766 aa11.21□□□□□ -0.62
PUDP-205ENST00000498474 PARP4Q9UKK3 1724 aaKnown RBP11.21□□□□□ -0.62
PUDP-205ENST00000498474 APBA3O96018 575 aa11.2□□□□□ -0.62
PUDP-205ENST00000498474 NECTIN2Q92692 538 aa11.2□□□□□ -0.62
PUDP-205ENST00000498474 A0A1W2PP64 1363 aa11.19□□□□□ -0.62
PUDP-205ENST00000498474 SBF2Q86WG5 1849 aa11.19□□□□□ -0.62
PUDP-205ENST00000498474 WNK3Q9BYP7 1800 aa11.19□□□□□ -0.62
PUDP-205ENST00000498474 TESPA1A2RU30 521 aaPredicted RBP11.19□□□□□ -0.62
PUDP-205ENST00000498474 CSB-PGBD3P0DP91 1061 aa11.19□□□□□ -0.62
PUDP-205ENST00000498474 FBLN1P23142 703 aa11.19□□□□□ -0.62
PUDP-205ENST00000498474 R3HDM1Q15032 1099 aaKnown RBP11.19□□□□□ -0.62
PUDP-205ENST00000498474 PTF1AQ7RTS3 328 aa11.19□□□□□ -0.62
PUDP-205ENST00000498474 HDGFL2Q7Z4V5 671 aaPredicted RBP11.19□□□□□ -0.62
PUDP-205ENST00000498474 KCNH5Q8NCM2 988 aa11.19□□□□□ -0.62
PUDP-205ENST00000498474 CAMKK2Q96RR4 588 aa11.19□□□□□ -0.62
PUDP-205ENST00000498474 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.19□□□□□ -0.62
PUDP-205ENST00000498474 THRAP3Q9Y2W1 955 aaKnown RBP11.19□□□□□ -0.62
PUDP-205ENST00000498474 LRRC37A3O60309 1634 aa11.19□□□□□ -0.62
PUDP-205ENST00000498474 KAT6BQ8WYB5 2073 aa11.18□□□□□ -0.62
PUDP-205ENST00000498474 WDR17Q8IZU2 1322 aa11.18□□□□□ -0.62
PUDP-205ENST00000498474 SLC4A3P48751 1232 aa11.18□□□□□ -0.62
PUDP-205ENST00000498474 BLOC1S3Q6QNY0 202 aa11.18□□□□□ -0.62
PUDP-205ENST00000498474 ZPR1O75312 459 aa11.17□□□□□ -0.62
PUDP-205ENST00000498474 DDB1Q16531 1140 aa11.17□□□□□ -0.62
PUDP-205ENST00000498474 Q6ZNB5 142 aa11.17□□□□□ -0.62
PUDP-205ENST00000498474 PCDHB3Q9Y5E6 796 aa11.17□□□□□ -0.62
PUDP-205ENST00000498474 PEAK1Q9H792 1746 aa11.17□□□□□ -0.62
PUDP-205ENST00000498474 USP31Q70CQ4 1352 aa11.16□□□□□ -0.62
PUDP-205ENST00000498474 FECHP22830 423 aa11.16□□□□□ -0.62
PUDP-205ENST00000498474 MARCH10Q8NA82 808 aaPredicted RBP11.16□□□□□ -0.62
PUDP-205ENST00000498474 USP54Q70EL1 1684 aa11.16□□□□□ -0.62
PUDP-205ENST00000498474 USP47Q96K76 1375 aa11.16□□□□□ -0.62
PUDP-205ENST00000498474 NUP188Q5SRE5 1749 aa11.15□□□□□ -0.62
PUDP-205ENST00000498474 RREB1Q92766 1687 aa11.15□□□□□ -0.62
PUDP-205ENST00000498474 SLC10A3P09131 477 aa11.15□□□□□ -0.62
PUDP-205ENST00000498474 LTV1Q96GA3 475 aaPredicted RBP11.15□□□□□ -0.62
PUDP-205ENST00000498474 CARD10Q9BWT7 1032 aa11.15□□□□□ -0.62
PUDP-205ENST00000498474 TERF2IPQ9NYB0 399 aa11.15□□□□□ -0.62
PUDP-205ENST00000498474 DISP2A7MBM2 1401 aa11.15□□□□□ -0.62
PUDP-205ENST00000498474 EDC4Q6P2E9 1401 aaKnown RBP11.15□□□□□ -0.62
PUDP-205ENST00000498474 RGPD2P0DJD1 1756 aa11.14□□□□□ -0.63
PUDP-205ENST00000498474 PXYLP1Q8TE99 480 aa11.14□□□□□ -0.63
PUDP-205ENST00000498474 ANKRD24Q8TF21 1146 aa11.14□□□□□ -0.63
PUDP-205ENST00000498474 NLRP2Q9NX02 1062 aa11.14□□□□□ -0.63
PUDP-205ENST00000498474 OVOS2A0A0G2JMS6 1433 aa11.13□□□□□ -0.63
PUDP-205ENST00000498474 OVOS2A0A0J9YW53 1432 aa11.13□□□□□ -0.63
PUDP-205ENST00000498474 OVOS2Q6IE36 1432 aa11.13□□□□□ -0.63
PUDP-205ENST00000498474 TLL1O43897 1013 aa11.13□□□□□ -0.63
PUDP-205ENST00000498474 GFRA3O60609 400 aa11.13□□□□□ -0.63
PUDP-205ENST00000498474 CFHP08603 1231 aa11.13□□□□□ -0.63
PUDP-205ENST00000498474 PRR14Q9BWN1 585 aa11.13□□□□□ -0.63
PUDP-205ENST00000498474 ACSBG1Q96GR2 724 aa11.12□□□□□ -0.63
PUDP-205ENST00000498474 PUS7Q96PZ0 661 aaKnown RBP11.12□□□□□ -0.63
PUDP-205ENST00000498474 GGNBP2Q9H3C7 697 aa11.12□□□□□ -0.63
PUDP-205ENST00000498474 EXOC5O00471 708 aa11.11□□□□□ -0.63
PUDP-205ENST00000498474 LCE2BO14633 110 aa11.11□□□□□ -0.63
PUDP-205ENST00000498474 GPR37O15354 613 aa11.11□□□□□ -0.63
PUDP-205ENST00000498474 KCNQ2O43526 872 aa11.11□□□□□ -0.63
PUDP-205ENST00000498474 TMF1P82094 1093 aa11.11□□□□□ -0.63
PUDP-205ENST00000498474 HIC1Q14526 733 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms