RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 DZIP3Q86Y13 1208 aaKnown RBP8.19□□□□□ -1.1
HMGXB4-208ENST00000498325 GTPBP3Q969Y2 492 aaKnown RBP8.19□□□□□ -1.1
HMGXB4-208ENST00000498325 DENND4BO75064 1496 aaPredicted RBP8.19□□□□□ -1.1
HMGXB4-208ENST00000498325 H7C1W4 665 aa8.18□□□□□ -1.1
HMGXB4-208ENST00000498325 RANGAP1P46060 587 aaPredicted RBP8.18□□□□□ -1.1
HMGXB4-208ENST00000498325 TRERF1Q96PN7 1200 aa8.18□□□□□ -1.1
HMGXB4-208ENST00000498325 LRRC4BQ9NT99 713 aa8.18□□□□□ -1.1
HMGXB4-208ENST00000498325 FHOD3Q2V2M9 1422 aa8.18□□□□□ -1.1
HMGXB4-208ENST00000498325 FBXO31Q5XUX0 539 aaPredicted RBP8.17□□□□□ -1.1
HMGXB4-208ENST00000498325 TRIM52Q96A61 297 aa8.17□□□□□ -1.1
HMGXB4-208ENST00000498325 CYLDQ9NQC7 956 aa8.17□□□□□ -1.1
HMGXB4-208ENST00000498325 ZFYVE16Q7Z3T8 1539 aa8.17□□□□□ -1.1
HMGXB4-208ENST00000498325 RICTORQ6R327 1708 aa8.17□□□□□ -1.1
HMGXB4-208ENST00000498325 POTEAQ6S8J7 498 aa8.16□□□□□ -1.1
HMGXB4-208ENST00000498325 PNMA1Q8ND90 353 aa8.16□□□□□ -1.1
HMGXB4-208ENST00000498325 GAS2L1Q99501 681 aaPredicted RBP8.16□□□□□ -1.1
HMGXB4-208ENST00000498325 NSFL1CQ9UNZ2 370 aaKnown RBP8.16□□□□□ -1.1
HMGXB4-208ENST00000498325 DYRK1BQ9Y463 629 aa8.16□□□□□ -1.1
HMGXB4-208ENST00000498325 ATP10BO94823 1461 aa8.15□□□□□ -1.1
HMGXB4-208ENST00000498325 ESPNB1AK53 854 aa8.15□□□□□ -1.1
HMGXB4-208ENST00000498325 MX2P20592 715 aa8.15□□□□□ -1.1
HMGXB4-208ENST00000498325 TRIM26Q12899 539 aaPredicted RBP8.15□□□□□ -1.1
HMGXB4-208ENST00000498325 PPP2R2DQ66LE6 453 aa8.15□□□□□ -1.1
HMGXB4-208ENST00000498325 VPS8Q8N3P4 1428 aa8.14□□□□□ -1.11
HMGXB4-208ENST00000498325 ATP5J2-PTCD1G3V325 749 aa8.14□□□□□ -1.11
HMGXB4-208ENST00000498325 MEN1O00255 615 aa8.14□□□□□ -1.11
HMGXB4-208ENST00000498325 GPC1P35052 558 aa8.14□□□□□ -1.11
HMGXB4-208ENST00000498325 BAG6P46379 1132 aa8.14□□□□□ -1.11
HMGXB4-208ENST00000498325 CTTNBP2Q8WZ74 1663 aa8.14□□□□□ -1.11
HMGXB4-208ENST00000498325 ZMYM4Q5VZL5 1548 aa8.13□□□□□ -1.11
HMGXB4-208ENST00000498325 OIP5O43482 229 aa8.13□□□□□ -1.11
HMGXB4-208ENST00000498325 TOM1O60784 492 aa8.13□□□□□ -1.11
HMGXB4-208ENST00000498325 SEPT12Q8IYM1 358 aa8.13□□□□□ -1.11
HMGXB4-208ENST00000498325 Q8N3U1 123 aa8.13□□□□□ -1.11
HMGXB4-208ENST00000498325 KRTAP4-8Q9BYQ9 185 aa8.13□□□□□ -1.11
HMGXB4-208ENST00000498325 EFCAB5A4FU69 1503 aa8.13□□□□□ -1.11
HMGXB4-208ENST00000498325 CAMSAP1Q5T5Y3 1602 aa8.12□□□□□ -1.11
HMGXB4-208ENST00000498325 KRBA1A5PL33 1030 aa8.12□□□□□ -1.11
HMGXB4-208ENST00000498325 SNRPNP63162 240 aaKnown RBP8.12□□□□□ -1.11
HMGXB4-208ENST00000498325 POU4F2Q12837 409 aa8.12□□□□□ -1.11
HMGXB4-208ENST00000498325 SLC27A3Q5K4L6 730 aa8.12□□□□□ -1.11
HMGXB4-208ENST00000498325 HECW1Q76N89 1606 aa8.11□□□□□ -1.11
HMGXB4-208ENST00000498325 ALKQ9UM73 1620 aa8.11□□□□□ -1.11
HMGXB4-208ENST00000498325 A0A1W2PRU2 124 aa8.11□□□□□ -1.11
HMGXB4-208ENST00000498325 AP1G2O75843 785 aa8.11□□□□□ -1.11
HMGXB4-208ENST00000498325 EPS8L1Q8TE68 723 aa8.11□□□□□ -1.11
HMGXB4-208ENST00000498325 OXCT2Q9BYC2 517 aaPredicted RBP8.11□□□□□ -1.11
HMGXB4-208ENST00000498325 MKL2Q9ULH7 1088 aa8.11□□□□□ -1.11
HMGXB4-208ENST00000498325 ATP1B4Q9UN42 357 aaPredicted RBP8.11□□□□□ -1.11
HMGXB4-208ENST00000498325 MAGI2Q86UL8 1455 aa8.11□□□□□ -1.11
HMGXB4-208ENST00000498325 ARHGAP35Q9NRY4 1499 aa8.11□□□□□ -1.11
HMGXB4-208ENST00000498325 TRAPPC8Q9Y2L5 1435 aa8.11□□□□□ -1.11
HMGXB4-208ENST00000498325 FURINP09958 794 aa8.1□□□□□ -1.11
HMGXB4-208ENST00000498325 PCGF6Q9BYE7 350 aa8.1□□□□□ -1.11
HMGXB4-208ENST00000498325 ATP10AO60312 1499 aa8.1□□□□□ -1.11
HMGXB4-208ENST00000498325 MAP2K3P46734 347 aa8.09□□□□□ -1.11
HMGXB4-208ENST00000498325 SKIV2LQ15477 1246 aaKnown RBP8.09□□□□□ -1.11
HMGXB4-208ENST00000498325 NBPF10Q6P3W6 841 aaKnown RBP8.09□□□□□ -1.11
HMGXB4-208ENST00000498325 ALYREFQ86V81 257 aaKnown RBP8.09□□□□□ -1.11
HMGXB4-208ENST00000498325 NBPF15Q8N660 670 aa8.09□□□□□ -1.11
HMGXB4-208ENST00000498325 NLRP3Q96P20 1036 aa8.09□□□□□ -1.11
HMGXB4-208ENST00000498325 NUCKS1Q9H1E3 243 aaKnown RBP8.09□□□□□ -1.11
HMGXB4-208ENST00000498325 SRCAPQ6ZRS2 3230 aa8.09□□□□□ -1.11
HMGXB4-208ENST00000498325 C9orf84Q5VXU9 1444 aa8.09□□□□□ -1.11
HMGXB4-208ENST00000498325 PROCA1Q8NCQ7 364 aaPredicted RBP8.08□□□□□ -1.12
HMGXB4-208ENST00000498325 SETD1AO15047 1707 aaKnown RBP8.08□□□□□ -1.12
HMGXB4-208ENST00000498325 C3P01024 1663 aa8.08□□□□□ -1.12
HMGXB4-208ENST00000498325 PPARGC1BQ86YN6 1023 aaKnown RBP8.07□□□□□ -1.12
HMGXB4-208ENST00000498325 GRIP2Q9C0E4 1043 aa8.07□□□□□ -1.12
HMGXB4-208ENST00000498325 RRAGCQ9HB90 399 aa8.07□□□□□ -1.12
HMGXB4-208ENST00000498325 SLC24A3Q9HC58 644 aa8.07□□□□□ -1.12
HMGXB4-208ENST00000498325 HMX1Q9NP08 348 aaPredicted RBP8.07□□□□□ -1.12
HMGXB4-208ENST00000498325 TIMMDC1Q9NPL8 285 aa8.07□□□□□ -1.12
HMGXB4-208ENST00000498325 SHISA8B8ZZ34 492 aa8.06□□□□□ -1.12
HMGXB4-208ENST00000498325 F11P03951 625 aa8.06□□□□□ -1.12
HMGXB4-208ENST00000498325 COL8A1P27658 744 aa8.06□□□□□ -1.12
HMGXB4-208ENST00000498325 WDR44Q5JSH3 913 aa8.06□□□□□ -1.12
HMGXB4-208ENST00000498325 PSMG3-AS1Q96PY0 264 aa8.06□□□□□ -1.12
HMGXB4-208ENST00000498325 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.06□□□□□ -1.12
HMGXB4-208ENST00000498325 CFHR5Q9BXR6 569 aa8.06□□□□□ -1.12
HMGXB4-208ENST00000498325 SETD1BQ9UPS6 1966 aaKnown RBP8.06□□□□□ -1.12
HMGXB4-208ENST00000498325 FMN1Q68DA7 1419 aa8.05□□□□□ -1.12
HMGXB4-208ENST00000498325 SPATA31C2B4DYI2 1134 aa8.05□□□□□ -1.12
HMGXB4-208ENST00000498325 GIGYF1O75420 1035 aaPredicted RBP8.05□□□□□ -1.12
HMGXB4-208ENST00000498325 SH3D19Q5HYK7 790 aa8.05□□□□□ -1.12
HMGXB4-208ENST00000498325 CC2D2BQ6DHV5 1058 aa8.05□□□□□ -1.12
HMGXB4-208ENST00000498325 TCOF1Q13428 1488 aaKnown RBP8.05□□□□□ -1.12
HMGXB4-208ENST00000498325 SCAPERQ9BY12 1400 aa8.04□□□□□ -1.12
HMGXB4-208ENST00000498325 USP17L8P0C7I0 530 aa8.04□□□□□ -1.12
HMGXB4-208ENST00000498325 CLN3Q13286 438 aa8.04□□□□□ -1.12
HMGXB4-208ENST00000498325 TAS1R3Q7RTX0 852 aa8.04□□□□□ -1.12
HMGXB4-208ENST00000498325 KLRG1Q96E93 195 aa8.04□□□□□ -1.12
HMGXB4-208ENST00000498325 GDF2Q9UK05 429 aaPredicted RBP8.04□□□□□ -1.12
HMGXB4-208ENST00000498325 PHF24Q9UPV7 400 aa8.04□□□□□ -1.12
HMGXB4-208ENST00000498325 PCDHB9Q9Y5E1 797 aa8.04□□□□□ -1.12
HMGXB4-208ENST00000498325 SAMD9Q5K651 1589 aa8.04□□□□□ -1.12
HMGXB4-208ENST00000498325 WASLO00401 505 aaPredicted RBP8.03□□□□□ -1.12
HMGXB4-208ENST00000498325 ERVK-9P63128 1117 aa8.03□□□□□ -1.12
HMGXB4-208ENST00000498325 GRIN2CQ14957 1233 aa8.03□□□□□ -1.12
HMGXB4-208ENST00000498325 C1orf229Q6ZS94 237 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms